RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 TSC1Q92574 1164 aa12.01□□□□□ -0.49
SH2D4A-204ENST00000519207 FMNL2Q96PY5 1086 aa12.01□□□□□ -0.49
SH2D4A-204ENST00000519207 COPRSQ9NQ92 184 aa12.01□□□□□ -0.49
SH2D4A-204ENST00000519207 PDRG1Q9NUG6 133 aa12.01□□□□□ -0.49
SH2D4A-204ENST00000519207 SMC3Q9UQE7 1217 aa12.01□□□□□ -0.49
SH2D4A-204ENST00000519207 ATP6V1DQ9Y5K8 247 aa12.01□□□□□ -0.49
SH2D4A-204ENST00000519207 SYCE3A1L190 88 aa12□□□□□ -0.49
SH2D4A-204ENST00000519207 STX6O43752 255 aa12□□□□□ -0.49
SH2D4A-204ENST00000519207 CSB-PGBD3P0DP91 1061 aa12□□□□□ -0.49
SH2D4A-204ENST00000519207 MYL6BP14649 208 aa12□□□□□ -0.49
SH2D4A-204ENST00000519207 SYCP1Q15431 976 aa12□□□□□ -0.49
SH2D4A-204ENST00000519207 KLHL34Q8N239 644 aa12□□□□□ -0.49
SH2D4A-204ENST00000519207 JAKMIP1Q96N16 626 aaKnown RBP12□□□□□ -0.49
SH2D4A-204ENST00000519207 MYD88Q99836 296 aa12□□□□□ -0.49
SH2D4A-204ENST00000519207 SYT1P21579 422 aa11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 PSMA5P28066 241 aa11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 HOXD11P31277 338 aaPredicted RBP11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 NBPF14Q5TI25 921 aa11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 USP48Q86UV5 1035 aa11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 PDCL2Q8N4E4 241 aa11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 MARCH10Q8NA82 808 aaPredicted RBP11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 CARD10Q9BWT7 1032 aa11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 CCDC8Q9H0W5 538 aaPredicted RBP11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 RBM8AQ9Y5S9 174 aaKnown RBP11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 CYP27B1O15528 508 aa11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 NMIQ13287 307 aaPredicted RBP11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 UVSSAQ2YD98 709 aa11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 ADCK5Q3MIX3 580 aa11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 RABL6Q3YEC7 729 aaPredicted RBP11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 RNF20Q5VTR2 975 aa11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 CREB3L3Q68CJ9 461 aa11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 OGFRQ9NZT2 677 aa11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 AFDNP55196 1824 aaKnown RBP11.99□□□□□ -0.49
SH2D4A-204ENST00000519207 EPHA10Q5JZY3 1008 aa11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 FAM227BQ96M60 508 aa11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 CDCA7Q9BWT1 371 aaPredicted RBP11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 SIL1Q9H173 461 aa11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 ALDH8A1Q9H2A2 487 aaPredicted RBP11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 USP16Q9Y5T5 823 aa11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 RFX7Q2KHR2 1363 aa11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 MED23Q9ULK4 1368 aa11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 LAMB4A4D0S4 1761 aa11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 ARFGEF2Q9Y6D5 1785 aa11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 PLSCR1O15162 318 aa11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 F13A1P00488 732 aa11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 SLFN14P0C7P3 912 aa11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 ATP5JP18859 108 aa11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 RFX5P48382 616 aaPredicted RBP11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 TSGA10IPQ3SY00 556 aa11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 FSD1Q9BTV5 496 aa11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 BOLA2Q9H3K6 86 aa11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 TSPY26PQ9H489 355 aa11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 TLR7Q9NYK1 1049 aaKnown RBP11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 HMG20BQ9P0W2 317 aa11.98□□□□□ -0.49
SH2D4A-204ENST00000519207 RREB1Q92766 1687 aa11.97□□□□□ -0.49
SH2D4A-204ENST00000519207 SLC27A2O14975 620 aa11.97□□□□□ -0.49
SH2D4A-204ENST00000519207 CPA1P15085 419 aa11.97□□□□□ -0.49
SH2D4A-204ENST00000519207 KCNJ4P48050 445 aa11.97□□□□□ -0.49
SH2D4A-204ENST00000519207 CABP4P57796 275 aa11.97□□□□□ -0.49
SH2D4A-204ENST00000519207 IRX5P78411 483 aaPredicted RBP11.97□□□□□ -0.49
SH2D4A-204ENST00000519207 ANKRD1Q15327 319 aa11.97□□□□□ -0.49
SH2D4A-204ENST00000519207 PLBD2Q8NHP8 589 aa11.97□□□□□ -0.49
SH2D4A-204ENST00000519207 TULP2O00295 520 aa11.96□□□□□ -0.49
SH2D4A-204ENST00000519207 EXOC5O00471 708 aa11.96□□□□□ -0.49
SH2D4A-204ENST00000519207 GADD45BO75293 160 aaPredicted RBP11.96□□□□□ -0.49
SH2D4A-204ENST00000519207 LARGE1O95461 756 aa11.96□□□□□ -0.49
SH2D4A-204ENST00000519207 UBE2HP62256 183 aa11.96□□□□□ -0.49
SH2D4A-204ENST00000519207 PTPN12Q05209 780 aaKnown RBP11.96□□□□□ -0.49
SH2D4A-204ENST00000519207 NUP188Q5SRE5 1749 aa11.96□□□□□ -0.49
SH2D4A-204ENST00000519207 A0A0D9SFI3 127 aa11.96□□□□□ -0.5
SH2D4A-204ENST00000519207 GJB2P29033 226 aa11.96□□□□□ -0.5
SH2D4A-204ENST00000519207 TNNI3KQ59H18 835 aa11.96□□□□□ -0.5
SH2D4A-204ENST00000519207 CCDC83Q8IWF9 413 aa11.96□□□□□ -0.5
SH2D4A-204ENST00000519207 PROM2Q8N271 834 aa11.96□□□□□ -0.5
SH2D4A-204ENST00000519207 FAM184AQ8NB25 1140 aa11.96□□□□□ -0.5
SH2D4A-204ENST00000519207 KLHDC4Q8TBB5 520 aa11.96□□□□□ -0.5
SH2D4A-204ENST00000519207 GDPD2Q9HCC8 539 aa11.96□□□□□ -0.5
SH2D4A-204ENST00000519207 FPGT-TNNI3KV9GXZ4 949 aa11.96□□□□□ -0.5
SH2D4A-204ENST00000519207 SBF2Q86WG5 1849 aa11.95□□□□□ -0.5
SH2D4A-204ENST00000519207 CASP7P55210 303 aa11.95□□□□□ -0.5
SH2D4A-204ENST00000519207 FAM193AP78312 1265 aa11.95□□□□□ -0.5
SH2D4A-204ENST00000519207 ME3Q16798 604 aa11.95□□□□□ -0.5
SH2D4A-204ENST00000519207 CCDC183Q5T5S1 534 aa11.95□□□□□ -0.5
SH2D4A-204ENST00000519207 USPL1Q5W0Q7 1092 aa11.95□□□□□ -0.5
SH2D4A-204ENST00000519207 UBE3BQ7Z3V4 1068 aa11.95□□□□□ -0.5
SH2D4A-204ENST00000519207 TICAM2Q86XR7 235 aa11.95□□□□□ -0.5
SH2D4A-204ENST00000519207 LARP6Q9BRS8 491 aaKnown RBP11.95□□□□□ -0.5
SH2D4A-204ENST00000519207 DBNLQ9UJU6 430 aaKnown RBP11.95□□□□□ -0.5
SH2D4A-204ENST00000519207 MTMR6Q9Y217 621 aa11.95□□□□□ -0.5
SH2D4A-204ENST00000519207 CNPY2Q9Y2B0 182 aa11.95□□□□□ -0.5
SH2D4A-204ENST00000519207 BCL9O00512 1426 aa11.95□□□□□ -0.5
SH2D4A-204ENST00000519207 A0A087WZG4 1122 aa11.94□□□□□ -0.5
SH2D4A-204ENST00000519207 U2AF2P26368 475 aaKnown RBP eCLIP11.94□□□□□ -0.58e-12■■□□□ 12.7
SH2D4A-204ENST00000519207 KRT32Q14532 448 aa11.94□□□□□ -0.5
SH2D4A-204ENST00000519207 BLOC1S2Q6QNY1 142 aa11.94□□□□□ -0.5
SH2D4A-204ENST00000519207 FAM53CQ9NYF3 392 aa11.94□□□□□ -0.5
SH2D4A-204ENST00000519207 CGNQ9P2M7 1197 aaKnown RBP11.94□□□□□ -0.5
SH2D4A-204ENST00000519207 CTNNA3Q9UI47 895 aa11.94□□□□□ -0.5
SH2D4A-204ENST00000519207 SPDYE4A6NLX3 237 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms