RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TAGLNQ01995 201 aaKnown RBP7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 GNL2Q13823 731 aaKnown RBP7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 LIAT1Q6ZQX7 453 aa7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 PPARGC1BQ86YN6 1023 aaKnown RBP7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 L3MBTL2Q969R5 705 aa7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 LRRC59Q96AG4 307 aaKnown RBP7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 DUSP9Q99956 384 aaKnown RBP7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 HRH3Q9Y5N1 445 aa7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 NKTRP30414 1462 aaKnown RBP7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 GFRA3O60609 400 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 STAU1O95793 577 aaKnown RBP7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 GNA15P30679 374 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 PTGIRP43119 386 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 ZAP70P43403 619 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 CENPCQ03188 943 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 GNASQ5JWF2 1037 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 TBCELQ5QJ74 424 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 RHBDD1Q8TEB9 315 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 RNF34Q969K3 372 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 IFT43Q96FT9 208 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 ZSCAN10Q96SZ4 725 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 LRFN2Q9ULH4 789 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 SPG7Q9UQ90 795 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 PLXNC1O60486 1568 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 SAMD9LQ8IVG5 1584 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 PNPLA6Q8IY17 1366 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 PNMA6FA0A0J9YX94 578 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 GIPC1O14908 333 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 GPR182O15218 404 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 LTKP29376 864 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 DNM1Q05193 864 aaKnown RBP7□□□□□ -1.29
HMGB1P23-201ENST00000518743 NNTQ13423 1086 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 DGKZQ13574 1117 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 NBPF1Q3BBV0 1214 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 TMEM214Q6NUQ4 689 aaKnown RBP7□□□□□ -1.29
HMGB1P23-201ENST00000518743 Q6ZVU0 165 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 PIK3R5Q8WYR1 880 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 MRGPRX2Q96LB1 330 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 SLC26A8Q96RN1 970 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 NIF3L1Q9GZT8 377 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 POLIQ9UNA4 740 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 FNDC3AQ9Y2H6 1198 aaKnown RBP7□□□□□ -1.29
HMGB1P23-201ENST00000518743 CDC42BPBQ9Y5S2 1711 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 WASHC2CQ9Y4E1 1318 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 SAMD9Q5K651 1589 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 IGHA2P01877 340 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 PDGFAP04085 211 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 NR3C2P08235 984 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 ZNF76P36508 570 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 NBPF10Q6P3W6 841 aaKnown RBP6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 Q6ZNB5 142 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 EDEM1Q92611 657 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 PHACTR1Q9C0D0 580 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 FHDC1Q9C0D6 1143 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 TGIF2Q9GZN2 237 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 ANKIB1Q9P2G1 1089 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 WWC3Q9ULE0 1092 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 PDZRN3Q9UPQ7 1066 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 SPHKAPQ2M3C7 1700 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 UBR1Q8IWV7 1749 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 RALGAPBQ86X10 1494 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 ARHGAP23Q9P227 1491 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 CFAP65Q6ZU64 1925 aaKnown RBP6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 MEN1O00255 615 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 KCNQ2O43526 872 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 ALDH1A1P00352 501 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 HDLBPQ00341 1268 aaKnown RBP6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 SPRYD7Q5W111 196 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 BRINP3Q76B58 766 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 CRELD1Q96HD1 420 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 CSRNP1Q96S65 589 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 CCSER2Q9H7U1 834 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 NLRP2Q9NX02 1062 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 ZDHHC3Q9NYG2 299 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 HCN4Q9Y3Q4 1203 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 SETD5Q9C0A6 1442 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 NCOA2Q15596 1464 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 FAM83GA6ND36 823 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 RGPD1P0DJD0 1748 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 TATP17735 454 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 IER5Q5VY09 327 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 TRIM67Q6ZTA4 783 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 KRT27Q7Z3Y8 459 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 NT5DC4Q86YG4 428 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 ETFBKMTQ8IXQ9 262 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 SLC43A3Q8NBI5 491 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 SNIP1Q8TAD8 396 aaKnown RBP6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 MAST1Q9Y2H9 1570 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 CAMSAP2Q08AD1 1489 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.96□□□□□ -1.29
HMGB1P23-201ENST00000518743 TGFBR3LH3BV60 316 aa6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 ZBTB39O15060 712 aa6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 CPNE3O75131 537 aaKnown RBP6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 HSP90B1P14625 803 aaKnown RBP6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 HNRNPMP52272 730 aaKnown RBP eCLIP6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 EZH2Q15910 746 aaKnown RBP6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 SLC27A3Q5K4L6 730 aa6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 ZNF697Q5TEC3 545 aa6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 ATCAYQ86WG3 371 aa6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 TREML1Q86YW5 311 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms