RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 ADGRL2O95490 1459 aa9.44□□□□□ -0.9
CCDC6-203ENST00000518638 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.44□□□□□ -0.9
CCDC6-203ENST00000518638 PTPRUQ92729 1446 aa9.43□□□□□ -0.9
CCDC6-203ENST00000518638 NALCNQ8IZF0 1738 aa9.42□□□□□ -0.9
CCDC6-203ENST00000518638 MARF1Q9Y4F3 1742 aaKnown RBP9.42□□□□□ -0.9
CCDC6-203ENST00000518638 ANKRD50Q9ULJ7 1429 aa9.42□□□□□ -0.9
CCDC6-203ENST00000518638 A0A1B0GTH6 734 aa9.42□□□□□ -0.9
CCDC6-203ENST00000518638 DOC2BQ14184 412 aa9.42□□□□□ -0.9
CCDC6-203ENST00000518638 RNF135Q8IUD6 432 aa9.42□□□□□ -0.9
CCDC6-203ENST00000518638 ARHGEF10LQ9HCE6 1279 aa9.42□□□□□ -0.9
CCDC6-203ENST00000518638 GGA1Q9UJY5 639 aa9.42□□□□□ -0.9
CCDC6-203ENST00000518638 CHIC2Q9UKJ5 165 aa9.42□□□□□ -0.9
CCDC6-203ENST00000518638 ATXN7L1Q9ULK2 861 aaPredicted RBP9.42□□□□□ -0.9
CCDC6-203ENST00000518638 DGKGP49619 791 aa9.41□□□□□ -0.9
CCDC6-203ENST00000518638 CCDC85AQ96PX6 553 aaPredicted RBP9.41□□□□□ -0.9
CCDC6-203ENST00000518638 NRXN3Q9Y4C0 1643 aa9.41□□□□□ -0.9
CCDC6-203ENST00000518638 C1orf167Q5SNV9 1468 aa9.4□□□□□ -0.9
CCDC6-203ENST00000518638 E9PCH4 1651 aa9.4□□□□□ -0.9
CCDC6-203ENST00000518638 SCO2A0A1W2PP80 73 aa9.4□□□□□ -0.9
CCDC6-203ENST00000518638 EPXP11678 715 aa9.4□□□□□ -0.9
CCDC6-203ENST00000518638 UBAP2LQ14157 1087 aaKnown RBP9.4□□□□□ -0.9
CCDC6-203ENST00000518638 NFATC2IPQ8NCF5 419 aa9.4□□□□□ -0.9
CCDC6-203ENST00000518638 BTBD6Q96KE9 485 aa9.4□□□□□ -0.9
CCDC6-203ENST00000518638 CALR3Q96L12 384 aaKnown RBP9.4□□□□□ -0.9
CCDC6-203ENST00000518638 UCN2Q96RP3 112 aa9.4□□□□□ -0.9
CCDC6-203ENST00000518638 KRTAP4-12Q9BQ66 201 aa9.4□□□□□ -0.9
CCDC6-203ENST00000518638 PCDHB11Q9Y5F2 797 aa9.4□□□□□ -0.9
CCDC6-203ENST00000518638 MYOM2P54296 1465 aa9.4□□□□□ -0.91
CCDC6-203ENST00000518638 PIK3CDO00329 1044 aa9.39□□□□□ -0.91
CCDC6-203ENST00000518638 CSB-PGBD3P0DP91 1061 aa9.39□□□□□ -0.91
CCDC6-203ENST00000518638 PGBD3Q8N328 593 aa9.39□□□□□ -0.91
CCDC6-203ENST00000518638 C2CD2LO14523 706 aa9.38□□□□□ -0.91
CCDC6-203ENST00000518638 FGFR3P22607 806 aa9.38□□□□□ -0.91
CCDC6-203ENST00000518638 MAP7D1Q3KQU3 841 aa9.38□□□□□ -0.91
CCDC6-203ENST00000518638 EFHC2Q5JST6 749 aa9.38□□□□□ -0.91
CCDC6-203ENST00000518638 KANK4Q5T7N3 995 aaPredicted RBP9.38□□□□□ -0.91
CCDC6-203ENST00000518638 PLPP7Q8NBV4 271 aa9.38□□□□□ -0.91
CCDC6-203ENST00000518638 DOLKQ9UPQ8 538 aa9.38□□□□□ -0.91
CCDC6-203ENST00000518638 BCL9LQ86UU0 1499 aa9.38□□□□□ -0.91
CCDC6-203ENST00000518638 NPHP3Q7Z494 1330 aa9.37□□□□□ -0.91
CCDC6-203ENST00000518638 PHKA2P46019 1235 aa9.37□□□□□ -0.91
CCDC6-203ENST00000518638 SCTRP47872 440 aa9.37□□□□□ -0.91
CCDC6-203ENST00000518638 TSGA10IPQ3SY00 556 aa9.37□□□□□ -0.91
CCDC6-203ENST00000518638 DDX17Q92841 729 aaKnown RBP9.37□□□□□ -0.91
CCDC6-203ENST00000518638 ABHD17AQ96GS6 310 aa9.37□□□□□ -0.91
CCDC6-203ENST00000518638 RUBCNLQ9H714 662 aa9.37□□□□□ -0.91
CCDC6-203ENST00000518638 LRPPRCP42704 1394 aaKnown RBP9.37□□□□□ -0.91
CCDC6-203ENST00000518638 EP400Q96L91 3159 aa9.36□□□□□ -0.91
CCDC6-203ENST00000518638 ARAFP10398 606 aa9.36□□□□□ -0.91
CCDC6-203ENST00000518638 GATA4P43694 442 aa9.36□□□□□ -0.91
CCDC6-203ENST00000518638 CDCA7Q9BWT1 371 aaPredicted RBP9.36□□□□□ -0.91
CCDC6-203ENST00000518638 OSBPL3Q9H4L5 887 aa9.36□□□□□ -0.91
CCDC6-203ENST00000518638 RAB6BQ9NRW1 208 aa9.36□□□□□ -0.91
CCDC6-203ENST00000518638 PRAG1Q86YV5 1406 aa9.36□□□□□ -0.91
CCDC6-203ENST00000518638 RALGAPBQ86X10 1494 aa9.35□□□□□ -0.91
CCDC6-203ENST00000518638 SKIP12755 728 aa9.35□□□□□ -0.91
CCDC6-203ENST00000518638 GNASQ5JWF2 1037 aa9.35□□□□□ -0.91
CCDC6-203ENST00000518638 TBC1D9Q6ZT07 1266 aa9.35□□□□□ -0.91
CCDC6-203ENST00000518638 ESYT1Q9BSJ8 1104 aa9.35□□□□□ -0.91
CCDC6-203ENST00000518638 METP08581 1390 aa9.35□□□□□ -0.91
CCDC6-203ENST00000518638 GLI3P10071 1580 aa9.34□□□□□ -0.91
CCDC6-203ENST00000518638 HFM1A2PYH4 1435 aa9.34□□□□□ -0.91
CCDC6-203ENST00000518638 ATP9BO43861 1147 aa9.34□□□□□ -0.91
CCDC6-203ENST00000518638 GTF2E1P29083 439 aaPredicted RBP9.34□□□□□ -0.91
CCDC6-203ENST00000518638 CTBSQ01459 385 aa9.34□□□□□ -0.91
CCDC6-203ENST00000518638 UNC5CLQ8IV45 518 aa9.34□□□□□ -0.91
CCDC6-203ENST00000518638 CNKSR1Q969H4 720 aa9.34□□□□□ -0.91
CCDC6-203ENST00000518638 ZSCAN10Q96SZ4 725 aaPredicted RBP9.34□□□□□ -0.91
CCDC6-203ENST00000518638 NDFIP2Q9NV92 336 aa9.34□□□□□ -0.91
CCDC6-203ENST00000518638 CDC42BPGQ6DT37 1551 aa9.33□□□□□ -0.92
CCDC6-203ENST00000518638 BRWD3Q6RI45 1802 aa9.33□□□□□ -0.92
CCDC6-203ENST00000518638 SLIT2O94813 1529 aa9.33□□□□□ -0.92
CCDC6-203ENST00000518638 NEURL1BA8MQ27 555 aa9.33□□□□□ -0.92
CCDC6-203ENST00000518638 USP17L5A8MUK1 530 aa9.33□□□□□ -0.92
CCDC6-203ENST00000518638 LZTS3O60299 673 aaPredicted RBP9.33□□□□□ -0.92
CCDC6-203ENST00000518638 GNRH1P01148 92 aa9.33□□□□□ -0.92
CCDC6-203ENST00000518638 CENPCQ03188 943 aa9.33□□□□□ -0.92
CCDC6-203ENST00000518638 OXLD1Q5BKU9 147 aa9.33□□□□□ -0.92
CCDC6-203ENST00000518638 ZNF326Q5BKZ1 582 aaKnown RBP9.33□□□□□ -0.92
CCDC6-203ENST00000518638 USP32Q8NFA0 1604 aa9.32□□□□□ -0.92
CCDC6-203ENST00000518638 RGPD1P0DJD0 1748 aa9.32□□□□□ -0.92
CCDC6-203ENST00000518638 NWD2Q9ULI1 1742 aa9.32□□□□□ -0.92
CCDC6-203ENST00000518638 BNIP3LO60238 219 aa9.32□□□□□ -0.92
CCDC6-203ENST00000518638 MYCP01106 439 aaPredicted RBP9.32□□□□□ -0.92
CCDC6-203ENST00000518638 MSX1P28360 303 aa9.32□□□□□ -0.92
CCDC6-203ENST00000518638 USP4Q13107 963 aa9.32□□□□□ -0.92
CCDC6-203ENST00000518638 CHSY3Q70JA7 882 aa9.32□□□□□ -0.92
CCDC6-203ENST00000518638 DEFB132Q7Z7B7 95 aa9.32□□□□□ -0.92
CCDC6-203ENST00000518638 PLEKHM2Q8IWE5 1019 aa9.32□□□□□ -0.92
CCDC6-203ENST00000518638 SIRT1Q96EB6 747 aa9.32□□□□□ -0.92
CCDC6-203ENST00000518638 ORAI2Q96SN7 254 aa9.32□□□□□ -0.92
CCDC6-203ENST00000518638 PPP1R12CQ9BZL4 782 aa9.32□□□□□ -0.92
CCDC6-203ENST00000518638 PXDNQ92626 1479 aa9.32□□□□□ -0.92
CCDC6-203ENST00000518638 NEXMIFQ5QGS0 1516 aa9.31□□□□□ -0.92
CCDC6-203ENST00000518638 PALM3A6NDB9 673 aaPredicted RBP9.31□□□□□ -0.92
CCDC6-203ENST00000518638 IL2RAP01589 272 aa9.31□□□□□ -0.92
CCDC6-203ENST00000518638 RSPO4Q2I0M5 234 aaPredicted RBP9.31□□□□□ -0.92
CCDC6-203ENST00000518638 FOXD4L6Q3SYB3 417 aaPredicted RBP9.31□□□□□ -0.92
CCDC6-203ENST00000518638 FOXD4L3Q6VB84 417 aaPredicted RBP9.31□□□□□ -0.92
CCDC6-203ENST00000518638 ZFP64Q9NPA5 681 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms