RNA–Protein interactions for RNA: ENST00000518230.5

ARFGEF1-203, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-203ENST00000518230 CLCN6P51797 869 aa11.44□□□□□ -0.58
ARFGEF1-203ENST00000518230 HNRNPH2P55795 449 aaKnown RBP11.44□□□□□ -0.58
ARFGEF1-203ENST00000518230 NBPF6Q5VWK0 638 aa11.44□□□□□ -0.58
ARFGEF1-203ENST00000518230 NBPF4Q96M43 638 aa11.44□□□□□ -0.58
ARFGEF1-203ENST00000518230 SIL1Q9H173 461 aa11.44□□□□□ -0.58
ARFGEF1-203ENST00000518230 C9orf78Q9NZ63 289 aaPredicted RBP11.44□□□□□ -0.58
ARFGEF1-203ENST00000518230 CRYBG1Q9Y4K1 1723 aa11.44□□□□□ -0.58
ARFGEF1-203ENST00000518230 SASH1O94885 1247 aa11.44□□□□□ -0.58
ARFGEF1-203ENST00000518230 CAVIN2O95810 425 aa11.44□□□□□ -0.58
ARFGEF1-203ENST00000518230 PDIA4P13667 645 aaKnown RBP11.44□□□□□ -0.58
ARFGEF1-203ENST00000518230 ADD1P35611 737 aaKnown RBP11.44□□□□□ -0.58
ARFGEF1-203ENST00000518230 BMS1Q14692 1282 aaKnown RBP11.44□□□□□ -0.58
ARFGEF1-203ENST00000518230 RNF20Q5VTR2 975 aa11.44□□□□□ -0.58
ARFGEF1-203ENST00000518230 PLCD3Q8N3E9 789 aa11.44□□□□□ -0.58
ARFGEF1-203ENST00000518230 CFAP45Q9UL16 551 aa11.44□□□□□ -0.58
ARFGEF1-203ENST00000518230 H2AFXP16104 143 aaPredicted RBP11.43□□□□□ -0.58
ARFGEF1-203ENST00000518230 PDE4CQ08493 712 aa11.43□□□□□ -0.58
ARFGEF1-203ENST00000518230 CWF19L2Q2TBE0 894 aaKnown RBP11.43□□□□□ -0.58
ARFGEF1-203ENST00000518230 SLFNL1Q499Z3 407 aa11.43□□□□□ -0.58
ARFGEF1-203ENST00000518230 Q6ZUG5 572 aa11.43□□□□□ -0.58
ARFGEF1-203ENST00000518230 DNAJC5Q9H3Z4 198 aa11.43□□□□□ -0.58
ARFGEF1-203ENST00000518230 NDUFB9Q9Y6M9 179 aa11.43□□□□□ -0.58
ARFGEF1-203ENST00000518230 PXDNLA1KZ92 1463 aa11.43□□□□□ -0.58
ARFGEF1-203ENST00000518230 NFAT5O94916 1531 aa11.43□□□□□ -0.58
ARFGEF1-203ENST00000518230 POLR3GO15318 223 aaPredicted RBP11.43□□□□□ -0.58
ARFGEF1-203ENST00000518230 PLA2G4AP47712 749 aa11.43□□□□□ -0.58
ARFGEF1-203ENST00000518230 GUCY1B3Q02153 619 aa11.43□□□□□ -0.58
ARFGEF1-203ENST00000518230 ARHGAP29Q52LW3 1261 aa11.43□□□□□ -0.58
ARFGEF1-203ENST00000518230 PPP1R13BQ96KQ4 1090 aa11.43□□□□□ -0.58
ARFGEF1-203ENST00000518230 FMNL2Q96PY5 1086 aa11.43□□□□□ -0.58
ARFGEF1-203ENST00000518230 LGR6Q9HBX8 967 aa11.43□□□□□ -0.58
ARFGEF1-203ENST00000518230 CALCOCO1Q9P1Z2 691 aa11.43□□□□□ -0.58
ARFGEF1-203ENST00000518230 PNMA6AP0CW24 399 aaPredicted RBP11.42□□□□□ -0.58
ARFGEF1-203ENST00000518230 CYP2C19P33261 490 aa11.42□□□□□ -0.58
ARFGEF1-203ENST00000518230 ARMCX5Q6P1M9 558 aa11.42□□□□□ -0.58
ARFGEF1-203ENST00000518230 KCNH5Q8NCM2 988 aa11.42□□□□□ -0.58
ARFGEF1-203ENST00000518230 KLHDC4Q8TBB5 520 aa11.42□□□□□ -0.58
ARFGEF1-203ENST00000518230 USP28Q96RU2 1077 aa11.42□□□□□ -0.58
ARFGEF1-203ENST00000518230 KINO60870 393 aaKnown RBP11.42□□□□□ -0.58
ARFGEF1-203ENST00000518230 GIGYF1O75420 1035 aaPredicted RBP11.42□□□□□ -0.58
ARFGEF1-203ENST00000518230 TMC6Q7Z403 805 aa11.42□□□□□ -0.58
ARFGEF1-203ENST00000518230 SEC62Q99442 399 aaKnown RBP11.42□□□□□ -0.58
ARFGEF1-203ENST00000518230 ANO10Q9NW15 660 aa11.42□□□□□ -0.58
ARFGEF1-203ENST00000518230 SMC2O95347 1197 aa11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 GCP02774 474 aa11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 SCRN1Q12765 414 aa11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 CCDC93Q567U6 631 aa11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 CCDC73Q6ZRK6 1079 aa11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 CCDC129Q6ZRS4 1044 aa11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 FSIP1Q8NA03 581 aa11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 XPO4Q9C0E2 1151 aaKnown RBP11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 EPC1Q9H2F5 836 aa11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 L2HGDHQ9H9P8 463 aa11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 RCOR1Q9UKL0 485 aa11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 TAF5LO75529 589 aa11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 SEC31AO94979 1220 aaKnown RBP11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 ME1P48163 572 aa11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 EIF4A1P60842 406 aaKnown RBP11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 ENGASEQ8NFI3 743 aa11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 NEK11Q8NG66 645 aa11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 NEK1Q96PY6 1258 aa11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 ZSCAN16Q9H4T2 348 aaPredicted RBP11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 ZCCHC17Q9NP64 241 aaKnown RBP11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 IFNKQ9P0W0 207 aa11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 MAP3K2Q9Y2U5 619 aa11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.41□□□□□ -0.58
ARFGEF1-203ENST00000518230 CTAGE5O15320 804 aa11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 PROSER2Q86WR7 435 aaPredicted RBP11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 HOMER1Q86YM7 354 aa11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 CEP57L1Q8IYX8 460 aa11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 ALDH8A1Q9H2A2 487 aaPredicted RBP11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 N4BP2Q86UW6 1770 aaPredicted RBP11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 A0A1B0GVL5 298 aa11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 HIP1O00291 1037 aa11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 TULP2O00295 520 aa11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 BIN1O00499 593 aa11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 CCT2P78371 535 aaKnown RBP11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 G3BP1Q13283 466 aaKnown RBP eCLIP11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 MTX1Q13505 466 aa11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 ARHGEF25Q86VW2 580 aa11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 LRRC59Q96AG4 307 aaKnown RBP11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 SDF4Q9BRK5 362 aa11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 DNAI1Q9UI46 699 aa11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 COL15A1P39059 1388 aa11.4□□□□□ -0.58
ARFGEF1-203ENST00000518230 LTN1O94822 1766 aa11.39□□□□□ -0.59
ARFGEF1-203ENST00000518230 GSDMDP57764 484 aa11.39□□□□□ -0.59
ARFGEF1-203ENST00000518230 PTPN21Q16825 1174 aa11.39□□□□□ -0.59
ARFGEF1-203ENST00000518230 PROSER3Q2NL68 480 aa11.39□□□□□ -0.59
ARFGEF1-203ENST00000518230 DPCR1Q3MIW9 517 aa11.39□□□□□ -0.59
ARFGEF1-203ENST00000518230 ISM2Q6H9L7 571 aa11.39□□□□□ -0.59
ARFGEF1-203ENST00000518230 OSBPL5Q9H0X9 879 aaPredicted RBP11.39□□□□□ -0.59
ARFGEF1-203ENST00000518230 BABAM1Q9NWV8 329 aa11.39□□□□□ -0.59
ARFGEF1-203ENST00000518230 LRRC37A3O60309 1634 aa11.39□□□□□ -0.59
ARFGEF1-203ENST00000518230 KIF2AO00139 706 aaPredicted RBP11.39□□□□□ -0.59
ARFGEF1-203ENST00000518230 FAM160A1Q05DH4 1040 aa11.39□□□□□ -0.59
ARFGEF1-203ENST00000518230 ERC1Q8IUD2 1116 aa11.39□□□□□ -0.59
ARFGEF1-203ENST00000518230 SUCLG2Q96I99 432 aa11.39□□□□□ -0.59
ARFGEF1-203ENST00000518230 NCOA5Q9HCD5 579 aaKnown RBP11.39□□□□□ -0.59
ARFGEF1-203ENST00000518230 KCND1Q9NSA2 647 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms