RNA–Protein interactions for RNA: ENST00000517790.1

PVT1-205, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 599 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-205ENST00000517790 GGNBP2Q9H3C7 697 aa6.85□□□□□ -1.31
PVT1-205ENST00000517790 BIN2Q9UBW5 565 aaPredicted RBP6.85□□□□□ -1.31
PVT1-205ENST00000517790 INSRP06213 1382 aa6.84□□□□□ -1.31
PVT1-205ENST00000517790 ZNF831Q5JPB2 1677 aa6.84□□□□□ -1.31
PVT1-205ENST00000517790 ADAMTS7Q9UKP4 1686 aa6.84□□□□□ -1.31
PVT1-205ENST00000517790 CNTNAP4Q9C0A0 1308 aa6.84□□□□□ -1.31
PVT1-205ENST00000517790 CCDC194A0A1B0GVG4 234 aa6.84□□□□□ -1.31
PVT1-205ENST00000517790 LZTS3O60299 673 aaPredicted RBP6.84□□□□□ -1.31
PVT1-205ENST00000517790 PEX14O75381 377 aa6.84□□□□□ -1.31
PVT1-205ENST00000517790 EIF3JO75822 258 aaKnown RBP6.84□□□□□ -1.31
PVT1-205ENST00000517790 IBSPP21815 317 aaPredicted RBP6.84□□□□□ -1.31
PVT1-205ENST00000517790 COL19A1Q14993 1142 aa6.84□□□□□ -1.31
PVT1-205ENST00000517790 RALBP1Q15311 655 aa6.84□□□□□ -1.31
PVT1-205ENST00000517790 ERFEQ4G0M1 354 aa6.84□□□□□ -1.31
PVT1-205ENST00000517790 TBC1D9Q6ZT07 1266 aa6.84□□□□□ -1.31
PVT1-205ENST00000517790 TTLL6Q8N841 843 aa6.84□□□□□ -1.31
PVT1-205ENST00000517790 DDX12PQ92771 950 aa6.84□□□□□ -1.31
PVT1-205ENST00000517790 NPDC1Q9NQX5 325 aaPredicted RBP6.84□□□□□ -1.31
PVT1-205ENST00000517790 PRKAG2Q9UGJ0 569 aa6.84□□□□□ -1.31
PVT1-205ENST00000517790 FAN1Q9Y2M0 1017 aa6.84□□□□□ -1.31
PVT1-205ENST00000517790 NOP58Q9Y2X3 529 aaKnown RBP6.84□□□□□ -1.31
PVT1-205ENST00000517790 FER1L6Q2WGJ9 1857 aa6.83□□□□□ -1.32
PVT1-205ENST00000517790 CARMIL3Q8ND23 1372 aa6.83□□□□□ -1.32
PVT1-205ENST00000517790 WDR33Q9C0J8 1336 aaKnown RBP6.83□□□□□ -1.32
PVT1-205ENST00000517790 RASSF10A6NK89 507 aa6.83□□□□□ -1.32
PVT1-205ENST00000517790 FYB1O15117 783 aa6.83□□□□□ -1.32
PVT1-205ENST00000517790 C21orf2O43822 256 aa6.83□□□□□ -1.32
PVT1-205ENST00000517790 ATP9BO43861 1147 aa6.83□□□□□ -1.32
PVT1-205ENST00000517790 LILRB3O75022 631 aa6.83□□□□□ -1.32
PVT1-205ENST00000517790 PTCD1O75127 700 aaKnown RBP6.83□□□□□ -1.32
PVT1-205ENST00000517790 PHKG2P15735 406 aa6.83□□□□□ -1.32
PVT1-205ENST00000517790 CRKLP46109 303 aaKnown RBP6.83□□□□□ -1.32
PVT1-205ENST00000517790 MRPL58Q14197 206 aaKnown RBP6.83□□□□□ -1.32
PVT1-205ENST00000517790 DEFB115Q30KQ5 88 aa6.83□□□□□ -1.32
PVT1-205ENST00000517790 APBB1IPQ7Z5R6 666 aaPredicted RBP6.83□□□□□ -1.32
PVT1-205ENST00000517790 C2CD5Q86YS7 1000 aa6.83□□□□□ -1.32
PVT1-205ENST00000517790 DHX38Q92620 1227 aaKnown RBP6.83□□□□□ -1.32
PVT1-205ENST00000517790 TINF2Q9BSI4 451 aa6.83□□□□□ -1.32
PVT1-205ENST00000517790 MCOLN1Q9GZU1 580 aa6.83□□□□□ -1.32
PVT1-205ENST00000517790 TAF1DQ9H5J8 278 aaPredicted RBP6.83□□□□□ -1.32
PVT1-205ENST00000517790 NOVA2Q9UNW9 492 aaKnown RBP6.83□□□□□ -1.32
PVT1-205ENST00000517790 SPG7Q9UQ90 795 aa6.83□□□□□ -1.32
PVT1-205ENST00000517790 NRXN2Q9P2S2 1712 aa6.82□□□□□ -1.32
PVT1-205ENST00000517790 CACNA1SQ13698 1873 aa6.82□□□□□ -1.32
PVT1-205ENST00000517790 ANKRD31Q8N7Z5 1873 aa6.82□□□□□ -1.32
PVT1-205ENST00000517790 ATP2B1P20020 1258 aa6.82□□□□□ -1.32
PVT1-205ENST00000517790 MAP2K1Q02750 393 aaPredicted RBP6.82□□□□□ -1.32
PVT1-205ENST00000517790 FMR1Q06787 632 aaKnown RBP eCLIP6.82□□□□□ -1.32
PVT1-205ENST00000517790 C1QBPQ07021 282 aaKnown RBP6.82□□□□□ -1.32
PVT1-205ENST00000517790 GRM1Q13255 1194 aa6.82□□□□□ -1.32
PVT1-205ENST00000517790 NFIXQ14938 502 aa6.82□□□□□ -1.32
PVT1-205ENST00000517790 EAPPQ56P03 285 aaPredicted RBP6.82□□□□□ -1.32
PVT1-205ENST00000517790 USPL1Q5W0Q7 1092 aa6.82□□□□□ -1.32
PVT1-205ENST00000517790 LDHDQ86WU2 507 aa6.82□□□□□ -1.32
PVT1-205ENST00000517790 SPIRE2Q8WWL2 714 aa6.82□□□□□ -1.32
PVT1-205ENST00000517790 CHPF2Q9P2E5 772 aa6.82□□□□□ -1.32
PVT1-205ENST00000517790 EMILIN1Q9Y6C2 1016 aa6.82□□□□□ -1.32
PVT1-205ENST00000517790 NCAPD2Q15021 1401 aa6.82□□□□□ -1.32
PVT1-205ENST00000517790 FLT4P35916 1363 aa6.82□□□□□ -1.32
PVT1-205ENST00000517790 TJP1Q07157 1748 aa6.81□□□□□ -1.32
PVT1-205ENST00000517790 LTBP1Q14766 1721 aa6.81□□□□□ -1.32
PVT1-205ENST00000517790 SCN4AP35499 1836 aa6.81□□□□□ -1.32
PVT1-205ENST00000517790 GJA5P36382 358 aa6.81□□□□□ -1.32
PVT1-205ENST00000517790 QPCTQ16769 361 aa6.81□□□□□ -1.32
PVT1-205ENST00000517790 LDLRAD1Q5T700 205 aa6.81□□□□□ -1.32
PVT1-205ENST00000517790 MAP1SQ66K74 1059 aaPredicted RBP6.81□□□□□ -1.32
PVT1-205ENST00000517790 INTS5Q6P9B9 1019 aaKnown RBP6.81□□□□□ -1.32
PVT1-205ENST00000517790 RSBN1LQ6PCB5 846 aaPredicted RBP6.81□□□□□ -1.32
PVT1-205ENST00000517790 METTL3Q86U44 580 aaKnown RBP6.81□□□□□ -1.32
PVT1-205ENST00000517790 IFNL2Q8IZJ0 200 aa6.81□□□□□ -1.32
PVT1-205ENST00000517790 CCDC24Q8N4L8 307 aa6.81□□□□□ -1.32
PVT1-205ENST00000517790 CLP1Q92989 425 aaKnown RBP6.81□□□□□ -1.32
PVT1-205ENST00000517790 SGSM3Q96HU1 749 aa6.81□□□□□ -1.32
PVT1-205ENST00000517790 SIN3AQ96ST3 1273 aa6.81□□□□□ -1.32
PVT1-205ENST00000517790 EYA1Q99502 592 aa6.81□□□□□ -1.32
PVT1-205ENST00000517790 PIF1Q9H611 641 aa6.81□□□□□ -1.32
PVT1-205ENST00000517790 ABT1Q9ULW3 272 aaKnown RBP6.81□□□□□ -1.32
PVT1-205ENST00000517790 CLEC11AQ9Y240 323 aa6.81□□□□□ -1.32
PVT1-205ENST00000517790 ADAMTSL1Q8N6G6 1762 aa6.81□□□□□ -1.32
PVT1-205ENST00000517790 COL11A2P13942 1736 aaPredicted RBP6.81□□□□□ -1.32
PVT1-205ENST00000517790 SLX4Q8IY92 1834 aa6.8□□□□□ -1.32
PVT1-205ENST00000517790 THSD7BQ9C0I4 1608 aa6.8□□□□□ -1.32
PVT1-205ENST00000517790 H0YIN7 160 aa6.8□□□□□ -1.32
PVT1-205ENST00000517790 AOC2O75106 756 aa6.8□□□□□ -1.32
PVT1-205ENST00000517790 OATP04181 439 aa6.8□□□□□ -1.32
PVT1-205ENST00000517790 SERPINB2P05120 415 aa6.8□□□□□ -1.32
PVT1-205ENST00000517790 SOX10P56693 466 aa6.8□□□□□ -1.32
PVT1-205ENST00000517790 RBL2Q08999 1139 aa6.8□□□□□ -1.32
PVT1-205ENST00000517790 TCEAL1Q15170 157 aa6.8□□□□□ -1.32
PVT1-205ENST00000517790 RTL5Q5HYW3 569 aaPredicted RBP6.8□□□□□ -1.32
PVT1-205ENST00000517790 CYP4F22Q6NT55 531 aa6.8□□□□□ -1.32
PVT1-205ENST00000517790 ZNF622Q969S3 477 aaKnown RBP eCLIP6.8□□□□□ -1.32
PVT1-205ENST00000517790 CCDC136Q96JN2 1154 aa6.8□□□□□ -1.32
PVT1-205ENST00000517790 CAPNS2Q96L46 248 aa6.8□□□□□ -1.32
PVT1-205ENST00000517790 ASB16Q96NS5 453 aa6.8□□□□□ -1.32
PVT1-205ENST00000517790 TRIM34Q9BYJ4 488 aa6.8□□□□□ -1.32
PVT1-205ENST00000517790 LAS1LQ9Y4W2 734 aaKnown RBP6.8□□□□□ -1.32
PVT1-205ENST00000517790 ZNF541Q9H0D2 1346 aa6.79□□□□□ -1.32
PVT1-205ENST00000517790 ZPR1O75312 459 aa6.79□□□□□ -1.32
PVT1-205ENST00000517790 GTF2F1P35269 517 aaKnown RBP eCLIP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms