RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 ORC3Q9UBD5 711 aaPredicted RBP7.7□□□□□ -1.18
CPNE3-203ENST00000517490 MAP3K19Q56UN5 1328 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 SPTLC2O15270 562 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 SYKP43405 635 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 LINS1Q8NG48 757 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 GOLGA1Q92805 767 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 PCMTD1Q96MG8 357 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-203ENST00000517490 NRBP1Q9UHY1 535 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 DDX41Q9UJV9 622 aaKnown RBP7.69□□□□□ -1.18
CPNE3-203ENST00000517490 LMTK2Q8IWU2 1503 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 GOLGA8BA8MQT2 603 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 POLR3DP05423 398 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-203ENST00000517490 MAP9Q49MG5 647 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 CCDC102BQ68D86 513 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 USHBP1Q8N6Y0 703 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 CACTINQ8WUQ7 758 aaKnown RBP7.69□□□□□ -1.18
CPNE3-203ENST00000517490 TBC1D2BQ9UPU7 963 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 USP8P40818 1118 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 MAPK8IP2Q13387 824 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-203ENST00000517490 CCDC12Q8WUD4 166 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-203ENST00000517490 ANKRD7Q92527 254 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 FAM227BQ96M60 508 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 LRRC2Q9BYS8 371 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 FAM107BQ9H098 131 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.69□□□□□ -1.18
CPNE3-203ENST00000517490 ANXA1P04083 346 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 LMOD1P29536 600 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-203ENST00000517490 AXDND1Q5T1B0 1012 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-203ENST00000517490 BRAPQ7Z569 592 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 KCNH5Q8NCM2 988 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 CCDC148Q8NFR7 591 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 MYD88Q99836 296 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 CEP131Q9UPN4 1083 aa7.69□□□□□ -1.18
CPNE3-203ENST00000517490 IFIT1P09914 478 aaKnown RBP7.68□□□□□ -1.18
CPNE3-203ENST00000517490 FKBP4Q02790 459 aaKnown RBP eCLIP7.68□□□□□ -1.18
CPNE3-203ENST00000517490 IQCEQ6IPM2 695 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 ANKRD24Q8TF21 1146 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 TTC14Q96N46 770 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 CEP126Q9P2H0 1117 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 PRDM4Q9UKN5 801 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 ATP10DQ9P241 1426 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 NBPF7P0C2Y1 421 aaPredicted RBP7.68□□□□□ -1.18
CPNE3-203ENST00000517490 EVCP57679 992 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 MPRIPQ6WCQ1 1025 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 SLC26A8Q96RN1 970 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 NCKAP5LQ9HCH0 1330 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 PSDA5PKW4 1024 aaPredicted RBP7.68□□□□□ -1.18
CPNE3-203ENST00000517490 ATP2B1P20020 1258 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 CEP112Q8N8E3 955 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 SIRT1Q96EB6 747 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 H0YHG0 523 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 ADCK5Q3MIX3 580 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 CTR9Q6PD62 1173 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 CCDC191Q8NCU4 936 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 JARID2Q92833 1246 aaPredicted RBP7.68□□□□□ -1.18
CPNE3-203ENST00000517490 MAP4K1Q92918 833 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 ARHGAP31Q2M1Z3 1444 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 MLH3Q9UHC1 1453 aa7.68□□□□□ -1.18
CPNE3-203ENST00000517490 CFAP65Q6ZU64 1925 aaKnown RBP7.67□□□□□ -1.18
CPNE3-203ENST00000517490 CTIFO43310 598 aaKnown RBP7.67□□□□□ -1.18
CPNE3-203ENST00000517490 MYL5Q02045 173 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 ZNF710Q8N1W2 664 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 MPHOSPH8Q99549 860 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 RASSF4Q9H2L5 321 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 ZNHIT6Q9NWK9 470 aaKnown RBP7.67□□□□□ -1.18
CPNE3-203ENST00000517490 RPAP1Q9BWH6 1393 aaPredicted RBP7.67□□□□□ -1.18
CPNE3-203ENST00000517490 ABCC3O15438 1527 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 GOLIM4O00461 696 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 TUBBP07437 444 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 TRHP20396 242 aaPredicted RBP7.67□□□□□ -1.18
CPNE3-203ENST00000517490 APOBRQ0VD83 1088 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 TERF2Q15554 542 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 ISM2Q6H9L7 571 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 KANK3Q6NY19 840 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 SARM1Q6SZW1 724 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 PI4K2BQ8TCG2 481 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 CRACR2AQ9BSW2 395 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 KCNF1Q9H3M0 494 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 NLRP2Q9NX02 1062 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 A0A1B0GVL5 298 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 JAK2O60674 1132 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 LARGE1O95461 756 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 ERCC6LQ2NKX8 1250 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 SLFNL1Q499Z3 407 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 DDX46Q7L014 1031 aaKnown RBP7.67□□□□□ -1.18
CPNE3-203ENST00000517490 PLA2G4DQ86XP0 818 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 MORC2Q9Y6X9 1032 aaPredicted RBP7.67□□□□□ -1.18
CPNE3-203ENST00000517490 MYO1BO43795 1136 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 DTNBO60941 627 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 NLRP12P59046 1061 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 FANCCQ00597 558 aa7.67□□□□□ -1.18
CPNE3-203ENST00000517490 UTP14AQ9BVJ6 771 aaKnown RBP7.67□□□□□ -1.18
CPNE3-203ENST00000517490 MAGEC2Q9UBF1 373 aaPredicted RBP7.67□□□□□ -1.18
CPNE3-203ENST00000517490 A0A0G2JS52 829 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 ZNF213O14771 459 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 ATP8B1O43520 1251 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 CCDC175P0C221 793 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 TATP17735 454 aaPredicted RBP7.66□□□□□ -1.18
CPNE3-203ENST00000517490 AKAP4Q5JQC9 854 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 TMX1Q9H3N1 280 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms