RNA–Protein interactions for RNA: ENST00000517354.5

CPNE3-201, Transcript of copine 3, humanhuman

TSL 4

Gene CPNE3, Length 566 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-201ENST00000517354 SLC6A14Q9UN76 642 aa10□□□□□ -0.81
CPNE3-201ENST00000517354 J3QW42 95 aa9.99□□□□□ -0.81
CPNE3-201ENST00000517354 CYP2E1P05181 493 aaPredicted RBP9.99□□□□□ -0.81
CPNE3-201ENST00000517354 EPXP11678 715 aa9.99□□□□□ -0.81
CPNE3-201ENST00000517354 GPLD1P80108 840 aa9.99□□□□□ -0.81
CPNE3-201ENST00000517354 ELMSAN1Q6PJG2 1045 aa9.99□□□□□ -0.81
CPNE3-201ENST00000517354 BTBD6Q96KE9 485 aa9.99□□□□□ -0.81
CPNE3-201ENST00000517354 DNAJC25Q9H1X3 360 aa9.99□□□□□ -0.81
CPNE3-201ENST00000517354 KANSL3Q9P2N6 904 aa9.99□□□□□ -0.81
CPNE3-201ENST00000517354 AMOTL2Q9Y2J4 779 aa9.99□□□□□ -0.81
CPNE3-201ENST00000517354 ZBTB42B2RXF5 422 aa9.98□□□□□ -0.81
CPNE3-201ENST00000517354 EIF1AYO14602 144 aaKnown RBP9.98□□□□□ -0.81
CPNE3-201ENST00000517354 TREHO43280 583 aa9.98□□□□□ -0.81
CPNE3-201ENST00000517354 EIF2AK2P19525 551 aaKnown RBP9.98□□□□□ -0.81
CPNE3-201ENST00000517354 ATP2B2Q01814 1243 aa9.98□□□□□ -0.81
CPNE3-201ENST00000517354 ORC1Q13415 861 aa9.98□□□□□ -0.81
CPNE3-201ENST00000517354 ZSCAN1Q8NBB4 408 aa9.98□□□□□ -0.81
CPNE3-201ENST00000517354 WHAMMQ8TF30 809 aa9.98□□□□□ -0.81
CPNE3-201ENST00000517354 ALKBH8Q96BT7 664 aaKnown RBP9.98□□□□□ -0.81
CPNE3-201ENST00000517354 CSRNP1Q96S65 589 aa9.98□□□□□ -0.81
CPNE3-201ENST00000517354 RRAGCQ9HB90 399 aa9.98□□□□□ -0.81
CPNE3-201ENST00000517354 EREGO14944 169 aa9.97□□□□□ -0.81
CPNE3-201ENST00000517354 POLR3DP05423 398 aaPredicted RBP9.97□□□□□ -0.81
CPNE3-201ENST00000517354 EDN3P14138 238 aa9.97□□□□□ -0.81
CPNE3-201ENST00000517354 EAPPQ56P03 285 aaPredicted RBP9.97□□□□□ -0.81
CPNE3-201ENST00000517354 RGS9O75916 674 aaPredicted RBP9.96□□□□□ -0.82
CPNE3-201ENST00000517354 DSC3Q14574 896 aa9.96□□□□□ -0.82
CPNE3-201ENST00000517354 ZNF385CQ66K41 422 aaPredicted RBP9.96□□□□□ -0.82
CPNE3-201ENST00000517354 C1orf229Q6ZS94 237 aaPredicted RBP9.96□□□□□ -0.82
CPNE3-201ENST00000517354 FGD1P98174 961 aa9.95□□□□□ -0.82
CPNE3-201ENST00000517354 PSAPL1Q6NUJ1 521 aa9.95□□□□□ -0.82
CPNE3-201ENST00000517354 CHSY3Q70JA7 882 aa9.95□□□□□ -0.82
CPNE3-201ENST00000517354 NLRP2Q9NX02 1062 aa9.95□□□□□ -0.82
CPNE3-201ENST00000517354 PNMA6FA0A0J9YX94 578 aa9.94□□□□□ -0.82
CPNE3-201ENST00000517354 FAM177BA6PVY3 158 aa9.94□□□□□ -0.82
CPNE3-201ENST00000517354 COL19A1Q14993 1142 aa9.94□□□□□ -0.82
CPNE3-201ENST00000517354 KANK3Q6NY19 840 aa9.94□□□□□ -0.82
CPNE3-201ENST00000517354 NUDT8Q8WV74 236 aa9.94□□□□□ -0.82
CPNE3-201ENST00000517354 CHRDQ9H2X0 955 aa9.94□□□□□ -0.82
CPNE3-201ENST00000517354 SALL4Q9UJQ4 1053 aa9.94□□□□□ -0.82
CPNE3-201ENST00000517354 GADD45BO75293 160 aaPredicted RBP9.93□□□□□ -0.82
CPNE3-201ENST00000517354 SMNDC1O75940 238 aaKnown RBP eCLIP9.93□□□□□ -0.82
CPNE3-201ENST00000517354 IGHA2P01877 340 aa9.93□□□□□ -0.82
CPNE3-201ENST00000517354 HOXD8P13378 290 aaPredicted RBP9.93□□□□□ -0.82
CPNE3-201ENST00000517354 COL13A1Q5TAT6 717 aaPredicted RBP9.93□□□□□ -0.82
CPNE3-201ENST00000517354 ALG1LQ6GMV1 187 aa9.93□□□□□ -0.82
CPNE3-201ENST00000517354 DNAJC14Q6Y2X3 702 aaPredicted RBP9.93□□□□□ -0.82
CPNE3-201ENST00000517354 PPP4R2Q9NY27 417 aa9.93□□□□□ -0.82
CPNE3-201ENST00000517354 FAM181BA6NEQ2 426 aa9.92□□□□□ -0.82
CPNE3-201ENST00000517354 SHISA8B8ZZ34 492 aa9.92□□□□□ -0.82
CPNE3-201ENST00000517354 PERM1Q5SV97 790 aa9.92□□□□□ -0.82
CPNE3-201ENST00000517354 USPL1Q5W0Q7 1092 aa9.92□□□□□ -0.82
CPNE3-201ENST00000517354 CEP135Q66GS9 1140 aa9.92□□□□□ -0.82
CPNE3-201ENST00000517354 CCDC74AQ96AQ1 378 aa9.92□□□□□ -0.82
CPNE3-201ENST00000517354 PLD4Q96BZ4 506 aa9.92□□□□□ -0.82
CPNE3-201ENST00000517354 SMG9Q9H0W8 520 aaKnown RBP9.92□□□□□ -0.82
CPNE3-201ENST00000517354 BCL11AQ9H165 835 aa9.92□□□□□ -0.82
CPNE3-201ENST00000517354 JPH1Q9HDC5 661 aaPredicted RBP9.92□□□□□ -0.82
CPNE3-201ENST00000517354 LILRB5O75023 590 aa9.91□□□□□ -0.82
CPNE3-201ENST00000517354 KIF4AO95239 1232 aa9.91□□□□□ -0.82
CPNE3-201ENST00000517354 LDHBP07195 334 aaKnown RBP9.91□□□□□ -0.82
CPNE3-201ENST00000517354 P4HBP07237 508 aaKnown RBP9.91□□□□□ -0.82
CPNE3-201ENST00000517354 FMR1Q06787 632 aaKnown RBP eCLIP9.91□□□□□ -0.82
CPNE3-201ENST00000517354 ENOX2Q16206 610 aaKnown RBP9.91□□□□□ -0.82
CPNE3-201ENST00000517354 GALNT12Q8IXK2 581 aa9.91□□□□□ -0.82
CPNE3-201ENST00000517354 CEP120Q8N960 986 aa9.91□□□□□ -0.82
CPNE3-201ENST00000517354 OSMRQ99650 979 aa9.91□□□□□ -0.82
CPNE3-201ENST00000517354 FRRS1LQ9P0K9 344 aa9.91□□□□□ -0.82
CPNE3-201ENST00000517354 M0R082 166 aa9.9□□□□□ -0.82
CPNE3-201ENST00000517354 ZNF417Q8TAU3 575 aa9.9□□□□□ -0.82
CPNE3-201ENST00000517354 ZNF587Q96SQ5 575 aaPredicted RBP9.9□□□□□ -0.82
CPNE3-201ENST00000517354 BCL2L13Q9BXK5 485 aa9.9□□□□□ -0.82
CPNE3-201ENST00000517354 PBX4Q9BYU1 374 aa9.9□□□□□ -0.82
CPNE3-201ENST00000517354 PIK3R2O00459 728 aa9.89□□□□□ -0.83
CPNE3-201ENST00000517354 ZNF326Q5BKZ1 582 aaKnown RBP9.89□□□□□ -0.83
CPNE3-201ENST00000517354 PODNQ7Z5L7 613 aa9.89□□□□□ -0.83
CPNE3-201ENST00000517354 NPAS4Q8IUM7 802 aa9.89□□□□□ -0.83
CPNE3-201ENST00000517354 MDFIQ99750 246 aa9.89□□□□□ -0.83
CPNE3-201ENST00000517354 RASSF4Q9H2L5 321 aa9.89□□□□□ -0.83
CPNE3-201ENST00000517354 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.89□□□□□ -0.83
CPNE3-201ENST00000517354 ARHGEF15O94989 841 aa9.88□□□□□ -0.83
CPNE3-201ENST00000517354 GDF6Q6KF10 455 aaPredicted RBP9.88□□□□□ -0.83
CPNE3-201ENST00000517354 EHD4Q9H223 541 aa9.88□□□□□ -0.83
CPNE3-201ENST00000517354 WWC3Q9ULE0 1092 aa9.88□□□□□ -0.83
CPNE3-201ENST00000517354 STARD13Q9Y3M8 1113 aa9.88□□□□□ -0.83
CPNE3-201ENST00000517354 ALBP02768 609 aa9.87□□□□□ -0.83
CPNE3-201ENST00000517354 ATP11AP98196 1134 aa9.87□□□□□ -0.83
CPNE3-201ENST00000517354 XPCQ01831 940 aaPredicted RBP9.87□□□□□ -0.83
CPNE3-201ENST00000517354 BEND7Q8N7W2 519 aaPredicted RBP9.87□□□□□ -0.83
CPNE3-201ENST00000517354 EPS8L3Q8TE67 593 aaKnown RBP9.87□□□□□ -0.83
CPNE3-201ENST00000517354 FBF1Q8TES7 1133 aa9.87□□□□□ -0.83
CPNE3-201ENST00000517354 TTC9Q92623 222 aa9.87□□□□□ -0.83
CPNE3-201ENST00000517354 LPIN3Q9BQK8 851 aa9.87□□□□□ -0.83
CPNE3-201ENST00000517354 NPHS2Q9NP85 383 aa9.87□□□□□ -0.83
CPNE3-201ENST00000517354 DZANK1Q9NVP4 752 aa9.87□□□□□ -0.83
CPNE3-201ENST00000517354 NAGPAQ9UK23 515 aa9.87□□□□□ -0.83
CPNE3-201ENST00000517354 A0A1W2PP55 124 aa9.86□□□□□ -0.83
CPNE3-201ENST00000517354 PDE2AO00408 941 aaPredicted RBP9.86□□□□□ -0.83
CPNE3-201ENST00000517354 TRPA1O75762 1119 aa9.86□□□□□ -0.83
CPNE3-201ENST00000517354 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms