RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 NME9Q86XW9 330 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 ANKMY2Q8IV38 441 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 LARGE2Q8N3Y3 721 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 MPNDQ8N594 471 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 ZNF784Q8NCA9 323 aaPredicted RBP2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 TPCN2Q8NHX9 752 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 DDX17Q92841 729 aaKnown RBP2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 POLR3GLQ9BT43 218 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 PKD2L1Q9P0L9 805 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 SERTAD1Q9UHV2 236 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 PDZRN3Q9UPQ7 1066 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 FLT4P35916 1363 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 NWD2Q9ULI1 1742 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 COL3A1P02461 1466 aaPredicted RBP2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 MAP3K19Q56UN5 1328 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 MYBBP1AQ9BQG0 1328 aaKnown RBP2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 FAM208AQ9UK61 1670 aaKnown RBP2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 CAMTA1Q9Y6Y1 1673 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 COL14A1Q05707 1796 aaKnown RBP2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 FAM196BA6NMK8 535 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 SFI1A8K8P3 1242 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 MEN1O00255 615 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 BACH1O14867 736 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 ZBTB7BO15156 539 aaPredicted RBP2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 UPP2O95045 317 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 NR3C2P08235 984 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 GTF2E1P29083 439 aaPredicted RBP2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 CLDN10P78369 228 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 RELBQ01201 579 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 XPCQ01831 940 aaPredicted RBP2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 DDX10Q13206 875 aaKnown RBP2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 PTK7Q13308 1070 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 ELOAQ14241 798 aaKnown RBP2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 MORC1Q86VD1 984 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 NLRP3Q96P20 1036 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 TRAIPQ9BWF2 469 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 GGNBP2Q9H3C7 697 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 PRKRIP1Q9H875 184 aaPredicted RBP2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 ZNF395Q9H8N7 513 aaPredicted RBP2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 RAB6BQ9NRW1 208 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 PCDHGA11Q9Y5H2 935 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 KIAA0232Q92628 1395 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 COL5A2P05997 1499 aaPredicted RBP2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 PLCH1Q4KWH8 1693 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 COL18A1P39060 1754 aa2.95□□□□□ -1.94
SCARNA16.3-201ENST00000516595 NRAPQ86VF7 1730 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 PEAK1Q9H792 1746 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 CAPN5O15484 640 aaPredicted RBP2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 ANP32CO43423 234 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 GDF9O60383 454 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 PRMT3O60678 531 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 ADD1P35611 737 aaKnown RBP2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 GDF10P55107 478 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 ERVK-9P63128 1117 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 CBLBQ13191 982 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 TMEM164Q5U3C3 297 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 CYP2U1Q7Z449 544 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 TNS4Q8IZW8 715 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 KCTD17Q8N5Z5 321 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 STK32AQ8WU08 396 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 IP6K1Q92551 441 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 VTI1AQ96AJ9 217 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 ITPKCQ96DU7 683 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 PRIMPOLQ96LW4 560 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 AGBL1Q96MI9 1066 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 OSBPL3Q9H4L5 887 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 ZFAND3Q9H8U3 227 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 PRDM11Q9NQV5 511 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 POLKQ9UBT6 870 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 ZMIZ1Q9ULJ6 1067 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 USTQ9Y2C2 406 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 KDRP35968 1356 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 BCL9LQ86UU0 1499 aa2.94□□□□□ -1.94
SCARNA16.3-201ENST00000516595 WDR17Q8IZU2 1322 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 IGSF1Q8N6C5 1336 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 DISP2A7MBM2 1401 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 ATRNO75882 1429 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 CRB1P82279 1406 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 RGPD1P0DJD0 1748 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 LTN1O94822 1766 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 A0A1W2PRU2 124 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 FAM83GA6ND36 823 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 FAM187AA6NFU0 413 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 CCER2I3L3R5 266 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 GFRA3O60609 400 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 LILRA1O75019 489 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 STAU1O95793 577 aaKnown RBP2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 GNRH1P01148 92 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 INHAP05111 366 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 BMP2P12643 396 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 SMPD1P17405 629 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 PPP2R1AP30153 589 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 HOXC9P31274 260 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 AMPHP49418 695 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 MTHFSP49914 203 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 PKDCCQ504Y2 493 aa2.93□□□□□ -1.94
SCARNA16.3-201ENST00000516595 SLC27A3Q5K4L6 730 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms