RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 TMEM259Q4ZIN3 620 aa3.16□□□□□ -1.9
SNORA40.13-201ENST00000516379 CRTC2Q53ET0 693 aaPredicted RBP3.16□□□□□ -1.9
SNORA40.13-201ENST00000516379 ZNF574Q6ZN55 896 aaPredicted RBP3.16□□□□□ -1.9
SNORA40.13-201ENST00000516379 SPRED2Q7Z698 418 aa3.16□□□□□ -1.9
SNORA40.13-201ENST00000516379 BCL7CQ8WUZ0 217 aaPredicted RBP3.16□□□□□ -1.9
SNORA40.13-201ENST00000516379 PPP1R16BQ96T49 567 aa3.16□□□□□ -1.9
SNORA40.13-201ENST00000516379 METTL22Q9BUU2 404 aaPredicted RBP3.16□□□□□ -1.9
SNORA40.13-201ENST00000516379 PHACTR1Q9C0D0 580 aa3.16□□□□□ -1.9
SNORA40.13-201ENST00000516379 PCDHGA11Q9Y5H2 935 aa3.16□□□□□ -1.9
SNORA40.13-201ENST00000516379 FOXD2O60548 495 aaPredicted RBP3.15□□□□□ -1.91
SNORA40.13-201ENST00000516379 TARSP26639 723 aaKnown RBP3.15□□□□□ -1.91
SNORA40.13-201ENST00000516379 MAP4P27816 1152 aaKnown RBP3.15□□□□□ -1.91
SNORA40.13-201ENST00000516379 NFKB2Q00653 900 aa3.15□□□□□ -1.91
SNORA40.13-201ENST00000516379 SLFNL1Q499Z3 407 aa3.15□□□□□ -1.91
SNORA40.13-201ENST00000516379 ZC3H7BQ9UGR2 993 aaKnown RBP3.15□□□□□ -1.91
SNORA40.13-201ENST00000516379 HCN4Q9Y3Q4 1203 aa3.15□□□□□ -1.91
SNORA40.13-201ENST00000516379 ZNF503-AS2A6NEH8 195 aa3.14□□□□□ -1.91
SNORA40.13-201ENST00000516379 SART1O43290 800 aaKnown RBP3.14□□□□□ -1.91
SNORA40.13-201ENST00000516379 RNASE1P07998 156 aaKnown RBP3.14□□□□□ -1.91
SNORA40.13-201ENST00000516379 NRLP54845 237 aa3.14□□□□□ -1.91
SNORA40.13-201ENST00000516379 DUOXA2Q1HG44 320 aa3.14□□□□□ -1.91
SNORA40.13-201ENST00000516379 ANKRD34AQ69YU3 496 aa3.14□□□□□ -1.91
SNORA40.13-201ENST00000516379 FOXD4L4Q8WXT5 416 aaPredicted RBP3.14□□□□□ -1.91
SNORA40.13-201ENST00000516379 IFT43Q96FT9 208 aa3.14□□□□□ -1.91
SNORA40.13-201ENST00000516379 MUC3BQ9H195 1237 aa3.14□□□□□ -1.91
SNORA40.13-201ENST00000516379 ZNF358Q9NW07 568 aa3.14□□□□□ -1.91
SNORA40.13-201ENST00000516379 SLC5A6Q9Y289 635 aa3.14□□□□□ -1.91
SNORA40.13-201ENST00000516379 PPME1Q9Y570 386 aa3.14□□□□□ -1.91
SNORA40.13-201ENST00000516379 LINC01387J3KSC0 135 aa3.13□□□□□ -1.91
SNORA40.13-201ENST00000516379 J3QW42 95 aa3.13□□□□□ -1.91
SNORA40.13-201ENST00000516379 SUV39H1O43463 412 aa3.13□□□□□ -1.91
SNORA40.13-201ENST00000516379 ADAM11O75078 769 aa3.13□□□□□ -1.91
SNORA40.13-201ENST00000516379 IGHA2P01877 340 aa3.13□□□□□ -1.91
SNORA40.13-201ENST00000516379 C1QTNF9P0C862 333 aa3.13□□□□□ -1.91
SNORA40.13-201ENST00000516379 ADMP35318 185 aa3.13□□□□□ -1.91
SNORA40.13-201ENST00000516379 MLANAQ16655 118 aa3.13□□□□□ -1.91
SNORA40.13-201ENST00000516379 RTN1Q16799 776 aa3.13□□□□□ -1.91
SNORA40.13-201ENST00000516379 SGO2Q562F6 1265 aa3.13□□□□□ -1.91
SNORA40.13-201ENST00000516379 TNS4Q8IZW8 715 aa3.13□□□□□ -1.91
SNORA40.13-201ENST00000516379 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.13□□□□□ -1.91
SNORA40.13-201ENST00000516379 RC3H2Q9HBD1 1191 aaKnown RBP3.13□□□□□ -1.91
SNORA40.13-201ENST00000516379 MBNL3Q9NUK0 354 aaKnown RBP3.13□□□□□ -1.91
SNORA40.13-201ENST00000516379 DMGDHQ9UI17 866 aaKnown RBP3.13□□□□□ -1.91
SNORA40.13-201ENST00000516379 ADAMTS6Q9UKP5 1117 aa3.13□□□□□ -1.91
SNORA40.13-201ENST00000516379 TRIM33Q9UPN9 1127 aa3.13□□□□□ -1.91
SNORA40.13-201ENST00000516379 LOC102724428A0A0B4J2F2 783 aa3.12□□□□□ -1.91
SNORA40.13-201ENST00000516379 DDX3YO15523 660 aaKnown RBP3.12□□□□□ -1.91
SNORA40.13-201ENST00000516379 SIK1P57059 783 aa3.12□□□□□ -1.91
SNORA40.13-201ENST00000516379 MAP7D1Q3KQU3 841 aa3.12□□□□□ -1.91
SNORA40.13-201ENST00000516379 IER5Q5VY09 327 aa3.12□□□□□ -1.91
SNORA40.13-201ENST00000516379 SYDE1Q6ZW31 735 aaPredicted RBP3.12□□□□□ -1.91
SNORA40.13-201ENST00000516379 KRT25Q7Z3Z0 450 aa3.12□□□□□ -1.91
SNORA40.13-201ENST00000516379 CACTIN-AS1Q8N1I8 211 aa3.12□□□□□ -1.91
SNORA40.13-201ENST00000516379 LRRN4CLQ8ND94 238 aa3.12□□□□□ -1.91
SNORA40.13-201ENST00000516379 UBASH3BQ8TF42 649 aa3.12□□□□□ -1.91
SNORA40.13-201ENST00000516379 GATA6Q92908 595 aa3.12□□□□□ -1.91
SNORA40.13-201ENST00000516379 ADAM19Q9H013 955 aa3.12□□□□□ -1.91
SNORA40.13-201ENST00000516379 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.11□□□□□ -1.91
SNORA40.13-201ENST00000516379 SASH3O75995 380 aa3.11□□□□□ -1.91
SNORA40.13-201ENST00000516379 RARAP10276 462 aa3.11□□□□□ -1.91
SNORA40.13-201ENST00000516379 FUT4P22083 530 aa3.11□□□□□ -1.91
SNORA40.13-201ENST00000516379 PSMA6P60900 246 aaKnown RBP3.11□□□□□ -1.91
SNORA40.13-201ENST00000516379 TXNDC11Q6PKC3 985 aa3.11□□□□□ -1.91
SNORA40.13-201ENST00000516379 ZAR1Q86SH2 424 aa3.11□□□□□ -1.91
SNORA40.13-201ENST00000516379 PLPP7Q8NBV4 271 aa3.11□□□□□ -1.91
SNORA40.13-201ENST00000516379 TLR7Q9NYK1 1049 aaKnown RBP3.11□□□□□ -1.91
SNORA40.13-201ENST00000516379 A0A0G2JLL6 359 aaPredicted RBP3.1□□□□□ -1.91
SNORA40.13-201ENST00000516379 FAM170BA6NMN3 283 aa3.1□□□□□ -1.91
SNORA40.13-201ENST00000516379 OVOL3O00110 214 aa3.1□□□□□ -1.91
SNORA40.13-201ENST00000516379 CARD10Q9BWT7 1032 aa3.1□□□□□ -1.91
SNORA40.13-201ENST00000516379 C11orf16Q9NQ32 467 aa3.1□□□□□ -1.91
SNORA40.13-201ENST00000516379 BCS1LQ9Y276 419 aa3.1□□□□□ -1.91
SNORA40.13-201ENST00000516379 FSCN2O14926 492 aa3.09□□□□□ -1.91
SNORA40.13-201ENST00000516379 SYN1P17600 705 aa3.09□□□□□ -1.91
SNORA40.13-201ENST00000516379 ARID4AP29374 1257 aaPredicted RBP3.09□□□□□ -1.91
SNORA40.13-201ENST00000516379 INPP5BP32019 993 aa3.09□□□□□ -1.91
SNORA40.13-201ENST00000516379 BNIP3Q12983 259 aa3.09□□□□□ -1.91
SNORA40.13-201ENST00000516379 HIF1AQ16665 826 aa3.09□□□□□ -1.91
SNORA40.13-201ENST00000516379 ZSWIM9Q86XI8 627 aa3.09□□□□□ -1.91
SNORA40.13-201ENST00000516379 ALDH16A1Q8IZ83 802 aa3.09□□□□□ -1.91
SNORA40.13-201ENST00000516379 STK11IPQ8N1F8 1099 aa3.09□□□□□ -1.91
SNORA40.13-201ENST00000516379 KLHL23Q8NBE8 558 aa3.09□□□□□ -1.91
SNORA40.13-201ENST00000516379 RNF208Q9H0X6 261 aa3.09□□□□□ -1.91
SNORA40.13-201ENST00000516379 FAM95CA0A1B0GW59 222 aa3.08□□□□□ -1.92
SNORA40.13-201ENST00000516379 NPIPB6E9PJ23 425 aa3.08□□□□□ -1.92
SNORA40.13-201ENST00000516379 TGFBR3LH3BV60 316 aa3.08□□□□□ -1.92
SNORA40.13-201ENST00000516379 GAS2O43903 313 aaKnown RBP3.08□□□□□ -1.92
SNORA40.13-201ENST00000516379 GHRHP01286 108 aa3.08□□□□□ -1.92
SNORA40.13-201ENST00000516379 CD8BP10966 210 aa3.08□□□□□ -1.92
SNORA40.13-201ENST00000516379 HOXD8P13378 290 aaPredicted RBP3.08□□□□□ -1.92
SNORA40.13-201ENST00000516379 RXRBP28702 533 aa3.08□□□□□ -1.92
SNORA40.13-201ENST00000516379 SEMA3FQ13275 785 aa3.08□□□□□ -1.92
SNORA40.13-201ENST00000516379 FDX2Q6P4F2 183 aa3.08□□□□□ -1.92
SNORA40.13-201ENST00000516379 ADAMTSL4Q6UY14 1074 aa3.08□□□□□ -1.92
SNORA40.13-201ENST00000516379 KLHDC7BQ96G42 594 aa3.08□□□□□ -1.92
SNORA40.13-201ENST00000516379 LIN37Q96GY3 246 aaPredicted RBP3.08□□□□□ -1.92
SNORA40.13-201ENST00000516379 TBC1D32Q96NH3 1257 aa3.08□□□□□ -1.92
SNORA40.13-201ENST00000516379 TSPAN10Q9H1Z9 355 aaPredicted RBP3.08□□□□□ -1.92
SNORA40.13-201ENST00000516379 LRRC4CQ9HCJ2 640 aa3.08□□□□□ -1.92
SNORA40.13-201ENST00000516379 PARD6AQ9NPB6 346 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms