RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 NRBP1Q9UHY1 535 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 SNRPA1P09661 255 aaKnown RBP11.87□□□□□ -0.51
SMG7-215ENST00000515829 CNNM3Q8NE01 707 aa11.87□□□□□ -0.51
SMG7-215ENST00000515829 AIDAQ96BJ3 306 aa11.87□□□□□ -0.51
SMG7-215ENST00000515829 SEC62Q99442 399 aaKnown RBP11.87□□□□□ -0.51
SMG7-215ENST00000515829 HSP90B2PQ58FF3 399 aa11.87□□□□□ -0.51
SMG7-215ENST00000515829 PAG1Q9NWQ8 432 aa11.87□□□□□ -0.51
SMG7-215ENST00000515829 PROSER3Q2NL68 480 aa11.87□□□□□ -0.51
SMG7-215ENST00000515829 DHX32Q7L7V1 743 aaKnown RBP11.87□□□□□ -0.51
SMG7-215ENST00000515829 DNAI1Q9UI46 699 aa11.87□□□□□ -0.51
SMG7-215ENST00000515829 CDK12Q9NYV4 1490 aaPredicted RBP11.87□□□□□ -0.51
SMG7-215ENST00000515829 SMAP1Q8IYB5 467 aaPredicted RBP11.86□□□□□ -0.51
SMG7-215ENST00000515829 ZSWIM4Q9H7M6 989 aa11.86□□□□□ -0.51
SMG7-215ENST00000515829 TLR7Q9NYK1 1049 aaKnown RBP11.86□□□□□ -0.51
SMG7-215ENST00000515829 IFNKQ9P0W0 207 aa11.86□□□□□ -0.51
SMG7-215ENST00000515829 NCOA3Q9Y6Q9 1424 aa11.86□□□□□ -0.51
SMG7-215ENST00000515829 TDO2P48775 406 aa11.86□□□□□ -0.51
SMG7-215ENST00000515829 FILIP1LQ4L180 1135 aa11.86□□□□□ -0.51
SMG7-215ENST00000515829 DDX21Q9NR30 783 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMG7-215ENST00000515829 A0A087WWV3 80 aa11.86□□□□□ -0.51
SMG7-215ENST00000515829 KRT28Q7Z3Y7 464 aa11.86□□□□□ -0.51
SMG7-215ENST00000515829 PI4K2BQ8TCG2 481 aa11.86□□□□□ -0.51
SMG7-215ENST00000515829 TM6SF1Q9BZW5 370 aa11.86□□□□□ -0.51
SMG7-215ENST00000515829 TCEAL9Q9UHQ7 104 aa11.86□□□□□ -0.51
SMG7-215ENST00000515829 RXRAP19793 462 aa11.86□□□□□ -0.51
SMG7-215ENST00000515829 GPTP24298 496 aa11.86□□□□□ -0.51
SMG7-215ENST00000515829 CTDP1Q9Y5B0 961 aaPredicted RBP11.86□□□□□ -0.51
SMG7-215ENST00000515829 PRAMEF22A3QJZ6 481 aa11.85□□□□□ -0.51
SMG7-215ENST00000515829 GCP02774 474 aa11.85□□□□□ -0.51
SMG7-215ENST00000515829 IFNL2Q8IZJ0 200 aa11.85□□□□□ -0.51
SMG7-215ENST00000515829 PRDM11Q9NQV5 511 aa11.85□□□□□ -0.51
SMG7-215ENST00000515829 SETBP1Q9Y6X0 1596 aa11.85□□□□□ -0.51
SMG7-215ENST00000515829 CWC25Q9NXE8 425 aaPredicted RBP11.85□□□□□ -0.51
SMG7-215ENST00000515829 SYT10Q6XYQ8 523 aa11.85□□□□□ -0.51
SMG7-215ENST00000515829 ROBO2Q9HCK4 1378 aa11.85□□□□□ -0.51
SMG7-215ENST00000515829 SYKP43405 635 aa11.85□□□□□ -0.51
SMG7-215ENST00000515829 TNNI3KQ59H18 835 aa11.85□□□□□ -0.51
SMG7-215ENST00000515829 ZSCAN25Q6NSZ9 544 aa11.85□□□□□ -0.51
SMG7-215ENST00000515829 AKAP2Q9Y2D5 859 aa11.85□□□□□ -0.51
SMG7-215ENST00000515829 FPGT-TNNI3KV9GXZ4 949 aa11.85□□□□□ -0.51
SMG7-215ENST00000515829 PPRC1Q5VV67 1664 aaKnown RBP11.85□□□□□ -0.51
SMG7-215ENST00000515829 UBASH3AP57075 661 aa11.85□□□□□ -0.51
SMG7-215ENST00000515829 SPTLC2O15270 562 aa11.84□□□□□ -0.51
SMG7-215ENST00000515829 IFIT5Q13325 482 aaKnown RBP11.84□□□□□ -0.51
SMG7-215ENST00000515829 BABAM1Q9NWV8 329 aa11.84□□□□□ -0.51
SMG7-215ENST00000515829 EPB41L2O43491 1005 aaKnown RBP11.84□□□□□ -0.51
SMG7-215ENST00000515829 KRT222Q8N1A0 295 aa11.84□□□□□ -0.51
SMG7-215ENST00000515829 CPSF1Q10570 1443 aaKnown RBP11.84□□□□□ -0.51
SMG7-215ENST00000515829 DHX8Q14562 1220 aaKnown RBP11.84□□□□□ -0.51
SMG7-215ENST00000515829 NCOA7Q8NI08 942 aa11.84□□□□□ -0.51
SMG7-215ENST00000515829 MRVI1Q9Y6F6 885 aa11.84□□□□□ -0.51
SMG7-215ENST00000515829 GOLGA8AA7E2F4 631 aa11.84□□□□□ -0.51
SMG7-215ENST00000515829 ZSCAN12O43309 604 aa11.84□□□□□ -0.51
SMG7-215ENST00000515829 PRC1O43663 620 aa11.84□□□□□ -0.51
SMG7-215ENST00000515829 SLU7O95391 586 aaKnown RBP11.84□□□□□ -0.51
SMG7-215ENST00000515829 METAP2P50579 478 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMG7-215ENST00000515829 IL25Q9H293 177 aa11.84□□□□□ -0.51
SMG7-215ENST00000515829 DACH1Q9UI36 760 aa11.84□□□□□ -0.51
SMG7-215ENST00000515829 IGSF1Q8N6C5 1336 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 CASQ1P31415 396 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 IARSP41252 1262 aaKnown RBP11.83□□□□□ -0.52
SMG7-215ENST00000515829 GNG11P61952 73 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 NACAP1Q9BZK3 213 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 IFIT3O14879 490 aaKnown RBP11.83□□□□□ -0.52
SMG7-215ENST00000515829 GTF2F1P35269 517 aaKnown RBP eCLIP11.83□□□□□ -0.522e-8■■■■■ 40.5
SMG7-215ENST00000515829 FAM160A1Q05DH4 1040 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 KCNG4Q8TDN1 519 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 CABLES1Q8TDN4 633 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 MPHOSPH8Q99549 860 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 NAPBQ9H115 298 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 MINDY4BA8MYZ0 360 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 ZNF589Q86UQ0 364 aaPredicted RBP11.83□□□□□ -0.52
SMG7-215ENST00000515829 CCDC150Q8NCX0 1101 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 CAGE1Q8TC20 777 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 UBAC1Q9BSL1 405 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 ALG1Q9BT22 464 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 SLC12A7Q9Y666 1083 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 HOXB7P09629 217 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 MEX3CQ5U5Q3 659 aaKnown RBP11.83□□□□□ -0.52
SMG7-215ENST00000515829 SMARCE1Q969G3 411 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 ZNF594Q96JF6 807 aaPredicted RBP11.83□□□□□ -0.52
SMG7-215ENST00000515829 SLC26A6Q9BXS9 759 aa11.83□□□□□ -0.52
SMG7-215ENST00000515829 GIGYF1O75420 1035 aaPredicted RBP11.82□□□□□ -0.52
SMG7-215ENST00000515829 ZNF790Q6PG37 636 aa11.82□□□□□ -0.52
SMG7-215ENST00000515829 LDHAL6AQ6ZMR3 332 aa11.82□□□□□ -0.52
SMG7-215ENST00000515829 MAP4K1Q92918 833 aa11.82□□□□□ -0.52
SMG7-215ENST00000515829 ABCF2Q9UG63 623 aa11.82□□□□□ -0.52
SMG7-215ENST00000515829 KIAA1524Q8TCG1 905 aa11.82□□□□□ -0.52
SMG7-215ENST00000515829 GTF3C6Q969F1 213 aa11.82□□□□□ -0.52
SMG7-215ENST00000515829 FTOQ9C0B1 505 aaKnown RBP eCLIP11.82□□□□□ -0.52
SMG7-215ENST00000515829 CFAP74Q9C0B2 1584 aa11.82□□□□□ -0.52
SMG7-215ENST00000515829 NEO1Q92859 1461 aa11.82□□□□□ -0.52
SMG7-215ENST00000515829 NAP1L1P55209 391 aaKnown RBP11.82□□□□□ -0.52
SMG7-215ENST00000515829 GCKRQ14397 625 aa11.82□□□□□ -0.52
SMG7-215ENST00000515829 ARHGAP29Q52LW3 1261 aa11.82□□□□□ -0.52
SMG7-215ENST00000515829 CCDC102BQ68D86 513 aa11.82□□□□□ -0.52
SMG7-215ENST00000515829 LRP2BPQ9P2M1 347 aa11.82□□□□□ -0.52
SMG7-215ENST00000515829 HECW2Q9P2P5 1572 aa11.82□□□□□ -0.52
SMG7-215ENST00000515829 TMEM2Q9UHN6 1383 aa11.81□□□□□ -0.52
SMG7-215ENST00000515829 TMEM67Q5HYA8 995 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms