RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 EIF4EBP3O60516 100 aaPredicted RBP5.96□□□□□ -1.46
CALCOCO2-223ENST00000514267 MZF1P28698 734 aaPredicted RBP5.96□□□□□ -1.46
CALCOCO2-223ENST00000514267 BAG6P46379 1132 aa5.96□□□□□ -1.46
CALCOCO2-223ENST00000514267 SIK1P57059 783 aa5.96□□□□□ -1.46
CALCOCO2-223ENST00000514267 PERM1Q5SV97 790 aa5.96□□□□□ -1.46
CALCOCO2-223ENST00000514267 XKR5Q6UX68 686 aa5.96□□□□□ -1.46
CALCOCO2-223ENST00000514267 FMR1NBQ8N0W7 255 aaPredicted RBP5.96□□□□□ -1.46
CALCOCO2-223ENST00000514267 NUDT8Q8WV74 236 aa5.96□□□□□ -1.46
CALCOCO2-223ENST00000514267 LPIN3Q9BQK8 851 aa5.96□□□□□ -1.46
CALCOCO2-223ENST00000514267 MMP20O60882 483 aa5.95□□□□□ -1.46
CALCOCO2-223ENST00000514267 SMNDC1O75940 238 aaKnown RBP eCLIP5.95□□□□□ -1.46
CALCOCO2-223ENST00000514267 NPR3P17342 541 aa5.95□□□□□ -1.46
CALCOCO2-223ENST00000514267 SCNN1AP37088 669 aa5.95□□□□□ -1.46
CALCOCO2-223ENST00000514267 ZNF438Q7Z4V0 828 aa5.95□□□□□ -1.46
CALCOCO2-223ENST00000514267 FBXO11Q86XK2 927 aa5.95□□□□□ -1.46
CALCOCO2-223ENST00000514267 AEBP1Q8IUX7 1158 aa5.95□□□□□ -1.46
CALCOCO2-223ENST00000514267 GPR152Q8TDT2 470 aa5.95□□□□□ -1.46
CALCOCO2-223ENST00000514267 GTF3C2Q8WUA4 911 aaPredicted RBP5.95□□□□□ -1.46
CALCOCO2-223ENST00000514267 PLD4Q96BZ4 506 aa5.95□□□□□ -1.46
CALCOCO2-223ENST00000514267 LENG1Q96BZ8 264 aaPredicted RBP5.95□□□□□ -1.46
CALCOCO2-223ENST00000514267 SMG9Q9H0W8 520 aaKnown RBP5.95□□□□□ -1.46
CALCOCO2-223ENST00000514267 K7ELQ4 463 aaPredicted RBP5.94□□□□□ -1.46
CALCOCO2-223ENST00000514267 ITGB2P05107 769 aa5.94□□□□□ -1.46
CALCOCO2-223ENST00000514267 TRIP4Q15650 581 aaPredicted RBP5.94□□□□□ -1.46
CALCOCO2-223ENST00000514267 NUDT16Q96DE0 195 aaKnown RBP5.94□□□□□ -1.46
CALCOCO2-223ENST00000514267 SEPT3Q9UH03 358 aa5.94□□□□□ -1.46
CALCOCO2-223ENST00000514267 ZBTB42B2RXF5 422 aa5.93□□□□□ -1.46
CALCOCO2-223ENST00000514267 KIF4AO95239 1232 aa5.93□□□□□ -1.46
CALCOCO2-223ENST00000514267 BRD1O95696 1058 aa5.93□□□□□ -1.46
CALCOCO2-223ENST00000514267 NEFLP07196 543 aa5.93□□□□□ -1.46
CALCOCO2-223ENST00000514267 CHRNA4P43681 627 aa5.93□□□□□ -1.46
CALCOCO2-223ENST00000514267 FKBP4Q02790 459 aaKnown RBP eCLIP5.93□□□□□ -1.46
CALCOCO2-223ENST00000514267 KCNA1Q09470 495 aa5.93□□□□□ -1.46
CALCOCO2-223ENST00000514267 IGF2-ASQ6U949 168 aa5.93□□□□□ -1.46
CALCOCO2-223ENST00000514267 TXNRD3Q86VQ6 643 aa5.93□□□□□ -1.46
CALCOCO2-223ENST00000514267 SLAIN2Q9P270 581 aa5.93□□□□□ -1.46
CALCOCO2-223ENST00000514267 ADAM23O75077 832 aa5.92□□□□□ -1.46
CALCOCO2-223ENST00000514267 EIF1AXP47813 144 aaKnown RBP5.92□□□□□ -1.46
CALCOCO2-223ENST00000514267 MLLT1Q03111 559 aaPredicted RBP5.92□□□□□ -1.46
CALCOCO2-223ENST00000514267 AAMPQ13685 434 aa5.92□□□□□ -1.46
CALCOCO2-223ENST00000514267 ADGRE1Q14246 886 aa5.92□□□□□ -1.46
CALCOCO2-223ENST00000514267 FAM117BQ6P1L5 589 aa5.92□□□□□ -1.46
CALCOCO2-223ENST00000514267 CAPN12Q6ZSI9 719 aa5.92□□□□□ -1.46
CALCOCO2-223ENST00000514267 C8orf86Q6ZUL3 223 aa5.92□□□□□ -1.46
CALCOCO2-223ENST00000514267 NCAPG2Q86XI2 1143 aa5.92□□□□□ -1.46
CALCOCO2-223ENST00000514267 NSUN5Q96P11 429 aaKnown RBP5.92□□□□□ -1.46
CALCOCO2-223ENST00000514267 ELP3Q9H9T3 547 aa5.92□□□□□ -1.46
CALCOCO2-223ENST00000514267 USP21Q9UK80 565 aa5.92□□□□□ -1.46
CALCOCO2-223ENST00000514267 PDGFAP04085 211 aa5.91□□□□□ -1.46
CALCOCO2-223ENST00000514267 CABP4P57796 275 aa5.91□□□□□ -1.46
CALCOCO2-223ENST00000514267 DNM1Q05193 864 aaKnown RBP5.91□□□□□ -1.46
CALCOCO2-223ENST00000514267 SUZ12Q15022 739 aaKnown RBP5.91□□□□□ -1.46
CALCOCO2-223ENST00000514267 GRIK5Q16478 980 aa5.91□□□□□ -1.46
CALCOCO2-223ENST00000514267 TMCO4Q5TGY1 634 aa5.91□□□□□ -1.46
CALCOCO2-223ENST00000514267 ILDR2Q71H61 639 aa5.91□□□□□ -1.46
CALCOCO2-223ENST00000514267 DMRTC2Q8IXT2 367 aaPredicted RBP5.91□□□□□ -1.46
CALCOCO2-223ENST00000514267 SNX29Q8TEQ0 813 aa5.91□□□□□ -1.46
CALCOCO2-223ENST00000514267 EDEM1Q92611 657 aa5.91□□□□□ -1.46
CALCOCO2-223ENST00000514267 USP20Q9Y2K6 914 aa5.91□□□□□ -1.46
CALCOCO2-223ENST00000514267 PPME1Q9Y570 386 aa5.91□□□□□ -1.46
CALCOCO2-223ENST00000514267 ZBTB39O15060 712 aa5.9□□□□□ -1.46
CALCOCO2-223ENST00000514267 EDN3P14138 238 aa5.9□□□□□ -1.46
CALCOCO2-223ENST00000514267 PTPRAP18433 802 aa5.9□□□□□ -1.46
CALCOCO2-223ENST00000514267 CES1P23141 567 aa5.9□□□□□ -1.46
CALCOCO2-223ENST00000514267 MPSTP25325 297 aa5.9□□□□□ -1.46
CALCOCO2-223ENST00000514267 MBTPS1Q14703 1052 aa5.9□□□□□ -1.46
CALCOCO2-223ENST00000514267 IL22RA1Q8N6P7 574 aa5.9□□□□□ -1.46
CALCOCO2-223ENST00000514267 WNT8BQ93098 351 aa5.9□□□□□ -1.46
CALCOCO2-223ENST00000514267 MRPL18Q9H0U6 180 aaKnown RBP5.9□□□□□ -1.46
CALCOCO2-223ENST00000514267 FAM229AH3BQW9 127 aa5.89□□□□□ -1.47
CALCOCO2-223ENST00000514267 H2AFB1P0C5Y9 115 aa5.89□□□□□ -1.47
CALCOCO2-223ENST00000514267 H2AFB2P0C5Z0 115 aa5.89□□□□□ -1.47
CALCOCO2-223ENST00000514267 CDC27P30260 824 aa5.89□□□□□ -1.47
CALCOCO2-223ENST00000514267 PDE3BQ13370 1112 aa5.89□□□□□ -1.47
CALCOCO2-223ENST00000514267 C8orf34Q49A92 452 aa5.89□□□□□ -1.47
CALCOCO2-223ENST00000514267 HFE2Q6ZVN8 426 aa5.89□□□□□ -1.47
CALCOCO2-223ENST00000514267 KLHL23Q8NBE8 558 aa5.89□□□□□ -1.47
CALCOCO2-223ENST00000514267 CCER1Q8TC90 406 aaPredicted RBP5.89□□□□□ -1.47
CALCOCO2-223ENST00000514267 CITED4Q96RK1 184 aa5.89□□□□□ -1.47
CALCOCO2-223ENST00000514267 PBX4Q9BYU1 374 aa5.89□□□□□ -1.47
CALCOCO2-223ENST00000514267 J3QW42 95 aa5.88□□□□□ -1.47
CALCOCO2-223ENST00000514267 NDUFB5O43674 189 aa5.88□□□□□ -1.47
CALCOCO2-223ENST00000514267 ABL1P00519 1130 aa5.88□□□□□ -1.47
CALCOCO2-223ENST00000514267 GRIK4Q16099 956 aa5.88□□□□□ -1.47
CALCOCO2-223ENST00000514267 FAM26DQ5JW98 314 aa5.88□□□□□ -1.47
CALCOCO2-223ENST00000514267 GDF6Q6KF10 455 aaPredicted RBP5.88□□□□□ -1.47
CALCOCO2-223ENST00000514267 SLC51AQ86UW1 340 aa5.88□□□□□ -1.47
CALCOCO2-223ENST00000514267 GLYCTKQ8IVS8 523 aa5.88□□□□□ -1.47
CALCOCO2-223ENST00000514267 GZF1Q9H116 711 aaPredicted RBP5.88□□□□□ -1.47
CALCOCO2-223ENST00000514267 DLL1O00548 723 aa5.87□□□□□ -1.47
CALCOCO2-223ENST00000514267 ICMTO60725 284 aa5.87□□□□□ -1.47
CALCOCO2-223ENST00000514267 PHACTR2O75167 634 aa5.87□□□□□ -1.47
CALCOCO2-223ENST00000514267 SELPP16109 830 aa5.87□□□□□ -1.47
CALCOCO2-223ENST00000514267 CEP135Q66GS9 1140 aa5.87□□□□□ -1.47
CALCOCO2-223ENST00000514267 GJD3Q8N144 294 aa5.87□□□□□ -1.47
CALCOCO2-223ENST00000514267 TMEM130Q8N3G9 435 aa5.87□□□□□ -1.47
CALCOCO2-223ENST00000514267 BRPF3Q9ULD4 1205 aa5.87□□□□□ -1.47
CALCOCO2-223ENST00000514267 POLIQ9UNA4 740 aa5.87□□□□□ -1.47
CALCOCO2-223ENST00000514267 ARL4DP49703 201 aa5.86□□□□□ -1.47
CALCOCO2-223ENST00000514267 PIP4K2BP78356 416 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms