RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 SEC31BQ9NQW1 1179 aa9.31□□□□□ -0.92
HTT-212ENST00000513639 BSDC1Q9NW68 430 aaPredicted RBP9.31□□□□□ -0.92
HTT-212ENST00000513639 MKRN1Q9UHC7 482 aaKnown RBP9.31□□□□□ -0.92
HTT-212ENST00000513639 PGAP2Q9UHJ9 254 aa9.31□□□□□ -0.92
HTT-212ENST00000513639 NEURL1BA8MQ27 555 aa9.3□□□□□ -0.92
HTT-212ENST00000513639 ATP2B4P23634 1241 aa9.3□□□□□ -0.92
HTT-212ENST00000513639 CTSWP56202 376 aa9.3□□□□□ -0.92
HTT-212ENST00000513639 EXOSC9Q06265 439 aaKnown RBP9.3□□□□□ -0.92
HTT-212ENST00000513639 GCKRQ14397 625 aa9.3□□□□□ -0.92
HTT-212ENST00000513639 CDC37L1Q7L3B6 337 aa9.3□□□□□ -0.92
HTT-212ENST00000513639 G2E3Q7L622 706 aa9.3□□□□□ -0.92
HTT-212ENST00000513639 DNAAF4Q8WXU2 420 aa9.3□□□□□ -0.92
HTT-212ENST00000513639 JARID2Q92833 1246 aaPredicted RBP9.3□□□□□ -0.92
HTT-212ENST00000513639 ABT1Q9ULW3 272 aaKnown RBP9.3□□□□□ -0.92
HTT-212ENST00000513639 TIAM2Q8IVF5 1701 aa9.3□□□□□ -0.92
HTT-212ENST00000513639 XDHP47989 1333 aa9.3□□□□□ -0.92
HTT-212ENST00000513639 FANCIQ9NVI1 1328 aa9.3□□□□□ -0.92
HTT-212ENST00000513639 YDJCA8MPS7 323 aa9.29□□□□□ -0.92
HTT-212ENST00000513639 PSMD14O00487 310 aa9.29□□□□□ -0.92
HTT-212ENST00000513639 ECE2O60344 883 aa9.29□□□□□ -0.92
HTT-212ENST00000513639 UFL1O94874 794 aa9.29□□□□□ -0.92
HTT-212ENST00000513639 VIL1P09327 827 aaKnown RBP9.29□□□□□ -0.92
HTT-212ENST00000513639 IGHMBP2P38935 993 aaKnown RBP9.29□□□□□ -0.92
HTT-212ENST00000513639 VEGFBP49765 207 aa9.29□□□□□ -0.92
HTT-212ENST00000513639 DOK7Q18PE1 504 aa9.29□□□□□ -0.92
HTT-212ENST00000513639 CWF19L2Q2TBE0 894 aaKnown RBP9.29□□□□□ -0.92
HTT-212ENST00000513639 PODNQ7Z5L7 613 aa9.29□□□□□ -0.92
HTT-212ENST00000513639 SLC51AQ86UW1 340 aa9.29□□□□□ -0.92
HTT-212ENST00000513639 CCDC85AQ96PX6 553 aaPredicted RBP9.29□□□□□ -0.92
HTT-212ENST00000513639 PLA2G12BQ9BX93 195 aa9.29□□□□□ -0.92
HTT-212ENST00000513639 ANKRD2Q9GZV1 360 aa9.29□□□□□ -0.92
HTT-212ENST00000513639 DBNDD1Q9H9R9 158 aa9.29□□□□□ -0.92
HTT-212ENST00000513639 CNTNAP1P78357 1384 aa9.28□□□□□ -0.92
HTT-212ENST00000513639 CACNA1SQ13698 1873 aa9.28□□□□□ -0.92
HTT-212ENST00000513639 RASSF10A6NK89 507 aa9.28□□□□□ -0.92
HTT-212ENST00000513639 CSF1RP07333 972 aa9.28□□□□□ -0.92
HTT-212ENST00000513639 HSPA1AP0DMV8 641 aaKnown RBP9.28□□□□□ -0.92
HTT-212ENST00000513639 HSPA1BP0DMV9 641 aaKnown RBP9.28□□□□□ -0.92
HTT-212ENST00000513639 ECE1P42892 770 aa9.28□□□□□ -0.92
HTT-212ENST00000513639 MMP14P50281 582 aa9.28□□□□□ -0.92
HTT-212ENST00000513639 MAP2K1Q02750 393 aaPredicted RBP9.28□□□□□ -0.92
HTT-212ENST00000513639 UBE3BQ7Z3V4 1068 aa9.28□□□□□ -0.92
HTT-212ENST00000513639 MICALL2Q8IY33 904 aa9.28□□□□□ -0.92
HTT-212ENST00000513639 AIDAQ96BJ3 306 aa9.28□□□□□ -0.92
HTT-212ENST00000513639 MPHOSPH8Q99549 860 aa9.28□□□□□ -0.92
HTT-212ENST00000513639 MINPP1Q9UNW1 487 aa9.28□□□□□ -0.92
HTT-212ENST00000513639 LEMD3Q9Y2U8 911 aa9.28□□□□□ -0.92
HTT-212ENST00000513639 RTL9Q8NET4 1388 aa9.27□□□□□ -0.93
HTT-212ENST00000513639 HIRAP54198 1017 aaPredicted RBP9.27□□□□□ -0.93
HTT-212ENST00000513639 CST9Q5W186 159 aa9.27□□□□□ -0.93
HTT-212ENST00000513639 AGBL3Q8NEM8 1001 aa9.27□□□□□ -0.93
HTT-212ENST00000513639 DCPSQ96C86 337 aaKnown RBP9.27□□□□□ -0.93
HTT-212ENST00000513639 GREM2Q9H772 168 aa9.27□□□□□ -0.93
HTT-212ENST00000513639 ZBTB12Q9Y330 459 aaPredicted RBP9.27□□□□□ -0.93
HTT-212ENST00000513639 WDR33Q9C0J8 1336 aaKnown RBP9.27□□□□□ -0.93
HTT-212ENST00000513639 ANKRD36CQ5JPF3 1778 aa9.27□□□□□ -0.93
HTT-212ENST00000513639 ANKRD18BA2A2Z9 1011 aa9.26□□□□□ -0.93
HTT-212ENST00000513639 USP17L3A6NCW0 530 aa9.26□□□□□ -0.93
HTT-212ENST00000513639 USP17L4A6NCW7 530 aa9.26□□□□□ -0.93
HTT-212ENST00000513639 CELF2O95319 508 aaKnown RBP9.26□□□□□ -0.93
HTT-212ENST00000513639 ITGA6P23229 1130 aa9.26□□□□□ -0.93
HTT-212ENST00000513639 MAP2K2P36507 400 aa9.26□□□□□ -0.93
HTT-212ENST00000513639 CCT4P50991 539 aaKnown RBP9.26□□□□□ -0.93
HTT-212ENST00000513639 IFIT5Q13325 482 aaKnown RBP9.26□□□□□ -0.93
HTT-212ENST00000513639 RBM26Q5T8P6 1007 aaKnown RBP9.26□□□□□ -0.93
HTT-212ENST00000513639 COL13A1Q5TAT6 717 aaPredicted RBP9.26□□□□□ -0.93
HTT-212ENST00000513639 USP17L1Q7RTZ2 530 aa9.26□□□□□ -0.93
HTT-212ENST00000513639 USP48Q86UV5 1035 aa9.26□□□□□ -0.93
HTT-212ENST00000513639 HHIPL1Q96JK4 782 aa9.26□□□□□ -0.93
HTT-212ENST00000513639 BEGAINQ9BUH8 593 aa9.26□□□□□ -0.93
HTT-212ENST00000513639 KCNQ5Q9NR82 932 aa9.26□□□□□ -0.93
HTT-212ENST00000513639 C9orf78Q9NZ63 289 aaPredicted RBP9.26□□□□□ -0.93
HTT-212ENST00000513639 COL4A5P29400 1685 aa9.26□□□□□ -0.93
HTT-212ENST00000513639 E9PSI1 815 aa9.25□□□□□ -0.93
HTT-212ENST00000513639 TRAF5O00463 557 aa9.25□□□□□ -0.93
HTT-212ENST00000513639 ALDH1L1O75891 902 aa9.25□□□□□ -0.93
HTT-212ENST00000513639 USP17L8P0C7I0 530 aa9.25□□□□□ -0.93
HTT-212ENST00000513639 KCNJ4P48050 445 aa9.25□□□□□ -0.93
HTT-212ENST00000513639 CTCFP49711 727 aaPredicted RBP9.25□□□□□ -0.93
HTT-212ENST00000513639 CASP7P55210 303 aa9.25□□□□□ -0.93
HTT-212ENST00000513639 TBC1D10BQ4KMP7 808 aaPredicted RBP9.25□□□□□ -0.93
HTT-212ENST00000513639 BEND3Q5T5X7 828 aa9.25□□□□□ -0.93
HTT-212ENST00000513639 RSBN1LQ6PCB5 846 aaPredicted RBP9.25□□□□□ -0.93
HTT-212ENST00000513639 PAXIP1Q6ZW49 1069 aaPredicted RBP9.25□□□□□ -0.93
HTT-212ENST00000513639 SAMD7Q7Z3H4 446 aa9.25□□□□□ -0.93
HTT-212ENST00000513639 KRT26Q7Z3Y9 468 aa9.25□□□□□ -0.93
HTT-212ENST00000513639 OGFOD1Q8N543 542 aa9.25□□□□□ -0.93
HTT-212ENST00000513639 GPR101Q96P66 508 aaPredicted RBP9.25□□□□□ -0.93
HTT-212ENST00000513639 COA1Q9GZY4 146 aa9.25□□□□□ -0.93
HTT-212ENST00000513639 WBP1LQ9NX94 342 aa9.25□□□□□ -0.93
HTT-212ENST00000513639 TLL2Q9Y6L7 1015 aa9.25□□□□□ -0.93
HTT-212ENST00000513639 ZNF280AP59817 542 aaPredicted RBP9.24□□□□□ -0.93
HTT-212ENST00000513639 POLA2Q14181 598 aa9.24□□□□□ -0.93
HTT-212ENST00000513639 CCDC57Q2TAC2 916 aa9.24□□□□□ -0.93
HTT-212ENST00000513639 SLC4A10Q6U841 1118 aa9.24□□□□□ -0.93
HTT-212ENST00000513639 SAPCD2Q86UD0 394 aa9.24□□□□□ -0.93
HTT-212ENST00000513639 SULF1Q8IWU6 871 aa9.24□□□□□ -0.93
HTT-212ENST00000513639 TNS4Q8IZW8 715 aa9.24□□□□□ -0.93
HTT-212ENST00000513639 C2orf69Q8N8R5 385 aa9.24□□□□□ -0.93
HTT-212ENST00000513639 TRPM4Q8TD43 1214 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms