RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 DCTN1Q14203 1278 aa12.51□□□□□ -0.41
TRIO-220ENST00000512979 TBC1D9BQ66K14 1250 aa12.51□□□□□ -0.41
TRIO-220ENST00000512979 KCTD17Q8N5Z5 321 aa12.51□□□□□ -0.41
TRIO-220ENST00000512979 HLA-CQ95604 372 aa12.51□□□□□ -0.41
TRIO-220ENST00000512979 SLC10A3P09131 477 aa12.5□□□□□ -0.41
TRIO-220ENST00000512979 C2CD5Q86YS7 1000 aa12.5□□□□□ -0.41
TRIO-220ENST00000512979 CARMIL3Q8ND23 1372 aa12.5□□□□□ -0.41
TRIO-220ENST00000512979 ARFGEF1Q9Y6D6 1849 aa12.49□□□□□ -0.41
TRIO-220ENST00000512979 PRAMEF22A3QJZ6 481 aa12.49□□□□□ -0.41
TRIO-220ENST00000512979 HTATSF1O43719 755 aaKnown RBP12.49□□□□□ -0.41
TRIO-220ENST00000512979 NEFMP07197 916 aa12.49□□□□□ -0.41
TRIO-220ENST00000512979 PIP4K2AP48426 406 aaPredicted RBP12.49□□□□□ -0.41
TRIO-220ENST00000512979 CTDSPL2Q05D32 466 aa12.49□□□□□ -0.41
TRIO-220ENST00000512979 IRF5Q13568 498 aa12.49□□□□□ -0.41
TRIO-220ENST00000512979 SWT1Q5T5J6 900 aaKnown RBP12.49□□□□□ -0.41
TRIO-220ENST00000512979 HMX1Q9NP08 348 aaPredicted RBP12.49□□□□□ -0.41
TRIO-220ENST00000512979 RNF181Q9P0P0 153 aa12.49□□□□□ -0.41
TRIO-220ENST00000512979 USP16Q9Y5T5 823 aa12.49□□□□□ -0.41
TRIO-220ENST00000512979 AFDNP55196 1824 aaKnown RBP12.48□□□□□ -0.41
TRIO-220ENST00000512979 NRXN2Q9P2S2 1712 aa12.48□□□□□ -0.41
TRIO-220ENST00000512979 H0YIN7 160 aa12.48□□□□□ -0.41
TRIO-220ENST00000512979 CAMTA2O94983 1202 aa12.48□□□□□ -0.41
TRIO-220ENST00000512979 SNRPA1P09661 255 aaKnown RBP12.48□□□□□ -0.41
TRIO-220ENST00000512979 MAMSTRQ6ZN01 415 aa12.48□□□□□ -0.41
TRIO-220ENST00000512979 DZIP3Q86Y13 1208 aaKnown RBP12.48□□□□□ -0.41
TRIO-220ENST00000512979 TTLL6Q8N841 843 aa12.48□□□□□ -0.41
TRIO-220ENST00000512979 HSPA6P17066 643 aa12.47□□□□□ -0.41
TRIO-220ENST00000512979 RASSF7Q02833 373 aa12.47□□□□□ -0.41
TRIO-220ENST00000512979 PRR5LQ6MZQ0 368 aa12.47□□□□□ -0.41
TRIO-220ENST00000512979 CCDC24Q8N4L8 307 aa12.47□□□□□ -0.41
TRIO-220ENST00000512979 SETDB2Q96T68 719 aa12.47□□□□□ -0.41
TRIO-220ENST00000512979 ZBED2Q9BTP6 218 aa12.47□□□□□ -0.41
TRIO-220ENST00000512979 NMRK2Q9NPI5 230 aa12.47□□□□□ -0.41
TRIO-220ENST00000512979 SCN7AQ01118 1682 aa12.47□□□□□ -0.41
TRIO-220ENST00000512979 NPHP1O15259 732 aa12.46□□□□□ -0.41
TRIO-220ENST00000512979 TAF7Q15545 349 aaPredicted RBP12.46□□□□□ -0.41
TRIO-220ENST00000512979 HDGFL1Q5TGJ6 251 aa12.46□□□□□ -0.41
TRIO-220ENST00000512979 ZNF622Q969S3 477 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRIO-220ENST00000512979 BRIP1Q9BX63 1249 aa12.46□□□□□ -0.41
TRIO-220ENST00000512979 MIS18AQ9NYP9 233 aa12.46□□□□□ -0.41
TRIO-220ENST00000512979 PDE6BP35913 854 aa12.45□□□□□ -0.42
TRIO-220ENST00000512979 MTMR2Q13614 643 aa12.45□□□□□ -0.42
TRIO-220ENST00000512979 CNBD1Q8NA66 436 aa12.45□□□□□ -0.42
TRIO-220ENST00000512979 ADAMTS19Q8TE59 1207 aa12.45□□□□□ -0.42
TRIO-220ENST00000512979 TSC1Q92574 1164 aa12.45□□□□□ -0.42
TRIO-220ENST00000512979 PLEKHF1Q96S99 279 aa12.45□□□□□ -0.42
TRIO-220ENST00000512979 TRIM34Q9BYJ4 488 aa12.45□□□□□ -0.42
TRIO-220ENST00000512979 PDZRN3Q9UPQ7 1066 aa12.45□□□□□ -0.42
TRIO-220ENST00000512979 SNPHO15079 494 aa12.44□□□□□ -0.42
TRIO-220ENST00000512979 TOMM70O94826 608 aa12.44□□□□□ -0.42
TRIO-220ENST00000512979 ST5P78524 1137 aa12.44□□□□□ -0.42
TRIO-220ENST00000512979 NFE2L2Q16236 605 aa12.44□□□□□ -0.42
TRIO-220ENST00000512979 HELBQ8NG08 1087 aaPredicted RBP12.44□□□□□ -0.42
TRIO-220ENST00000512979 ZNF652Q9Y2D9 606 aa12.44□□□□□ -0.42
TRIO-220ENST00000512979 KDM2BQ8NHM5 1336 aa12.43□□□□□ -0.42
TRIO-220ENST00000512979 MAPK8IP3Q9UPT6 1336 aa12.43□□□□□ -0.42
TRIO-220ENST00000512979 GPR37L1O60883 481 aa12.43□□□□□ -0.42
TRIO-220ENST00000512979 LMNB1P20700 586 aa12.43□□□□□ -0.42
TRIO-220ENST00000512979 PSEN2P49810 448 aa12.43□□□□□ -0.42
TRIO-220ENST00000512979 WASHC4Q2M389 1173 aa12.43□□□□□ -0.42
TRIO-220ENST00000512979 NBPF10Q6P3W6 841 aaKnown RBP12.43□□□□□ -0.42
TRIO-220ENST00000512979 CLEC4GQ6UXB4 293 aa12.43□□□□□ -0.42
TRIO-220ENST00000512979 C16orf71Q8IYS4 520 aaPredicted RBP12.43□□□□□ -0.42
TRIO-220ENST00000512979 NBPF15Q8N660 670 aa12.43□□□□□ -0.42
TRIO-220ENST00000512979 PNISRQ8TF01 805 aaKnown RBP12.43□□□□□ -0.42
TRIO-220ENST00000512979 LRRN4Q8WUT4 740 aa12.43□□□□□ -0.42
TRIO-220ENST00000512979 THUMPD2Q9BTF0 503 aaKnown RBP12.43□□□□□ -0.42
TRIO-220ENST00000512979 PNNQ9H307 717 aaKnown RBP12.43□□□□□ -0.42
TRIO-220ENST00000512979 SEPT9Q9UHD8 586 aaPredicted RBP12.43□□□□□ -0.42
TRIO-220ENST00000512979 DLEC1Q9Y238 1755 aa12.43□□□□□ -0.42
TRIO-220ENST00000512979 NFKBIEO00221 500 aa12.42□□□□□ -0.42
TRIO-220ENST00000512979 PRELPP51888 382 aa12.42□□□□□ -0.42
TRIO-220ENST00000512979 RALBP1Q15311 655 aa12.42□□□□□ -0.42
TRIO-220ENST00000512979 NBPF5PQ86XG9 351 aaPredicted RBP12.42□□□□□ -0.42
TRIO-220ENST00000512979 ZC3H4Q9UPT8 1303 aaKnown RBP12.41□□□□□ -0.42
TRIO-220ENST00000512979 BCORQ6W2J9 1755 aa12.41□□□□□ -0.42
TRIO-220ENST00000512979 CFAP99D6REC4 459 aa12.41□□□□□ -0.42
TRIO-220ENST00000512979 C21orf2O43822 256 aa12.41□□□□□ -0.42
TRIO-220ENST00000512979 ANKRD31Q8N7Z5 1873 aa12.41□□□□□ -0.42
TRIO-220ENST00000512979 RRAGCQ9HB90 399 aa12.41□□□□□ -0.42
TRIO-220ENST00000512979 RABGEF1Q9UJ41 708 aa12.41□□□□□ -0.42
TRIO-220ENST00000512979 NIP7Q9Y221 180 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRIO-220ENST00000512979 C6orf229H3BNL8 230 aa12.4□□□□□ -0.42
TRIO-220ENST00000512979 EIF4A1P60842 406 aaKnown RBP12.4□□□□□ -0.42
TRIO-220ENST00000512979 VAC14Q08AM6 782 aa12.4□□□□□ -0.42
TRIO-220ENST00000512979 STYK1Q6J9G0 422 aa12.4□□□□□ -0.42
TRIO-220ENST00000512979 NGEFQ8N5V2 710 aa12.4□□□□□ -0.42
TRIO-220ENST00000512979 CNKSR1Q969H4 720 aa12.4□□□□□ -0.42
TRIO-220ENST00000512979 MASTLQ96GX5 879 aa12.4□□□□□ -0.42
TRIO-220ENST00000512979 SBF1O95248 1867 aa12.4□□□□□ -0.42
TRIO-220ENST00000512979 COL11A2P13942 1736 aaPredicted RBP12.4□□□□□ -0.43
TRIO-220ENST00000512979 FAM177BA6PVY3 158 aa12.39□□□□□ -0.43
TRIO-220ENST00000512979 SRGNP10124 158 aa12.39□□□□□ -0.43
TRIO-220ENST00000512979 APLP1P51693 650 aa12.39□□□□□ -0.43
TRIO-220ENST00000512979 FUT2Q10981 343 aa12.39□□□□□ -0.43
TRIO-220ENST00000512979 DDX10Q13206 875 aaKnown RBP12.39□□□□□ -0.43
TRIO-220ENST00000512979 HLFQ16534 295 aa12.39□□□□□ -0.43
TRIO-220ENST00000512979 TPTE2Q6XPS3 522 aa12.39□□□□□ -0.43
TRIO-220ENST00000512979 DLG5Q8TDM6 1919 aa12.39□□□□□ -0.43
TRIO-220ENST00000512979 GLTPD2A6NH11 291 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms