RNA–Protein interactions for RNA: ENST00000512923.5

SSBP2-216, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-216ENST00000512923 FOXO4P98177 505 aa12.55□□□□□ -0.4
SSBP2-216ENST00000512923 MTX1Q13505 466 aa12.55□□□□□ -0.4
SSBP2-216ENST00000512923 SLC10A5Q5PT55 438 aa12.55□□□□□ -0.4
SSBP2-216ENST00000512923 NLRP3Q96P20 1036 aa12.55□□□□□ -0.4
SSBP2-216ENST00000512923 PPP4R2Q9NY27 417 aa12.55□□□□□ -0.4
SSBP2-216ENST00000512923 PCDHB15Q9Y5E8 787 aa12.55□□□□□ -0.4
SSBP2-216ENST00000512923 GTF3C3Q9Y5Q9 886 aa12.55□□□□□ -0.4
SSBP2-216ENST00000512923 ATP8B2P98198 1209 aa12.54□□□□□ -0.4
SSBP2-216ENST00000512923 EPHA10Q5JZY3 1008 aa12.54□□□□□ -0.4
SSBP2-216ENST00000512923 DPY19L2Q6NUT2 758 aa12.54□□□□□ -0.4
SSBP2-216ENST00000512923 LMBR1LQ6UX01 489 aa12.54□□□□□ -0.4
SSBP2-216ENST00000512923 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.54□□□□□ -0.4
SSBP2-216ENST00000512923 CHMP3Q9Y3E7 222 aa12.54□□□□□ -0.4
SSBP2-216ENST00000512923 KIF13BQ9NQT8 1826 aa12.54□□□□□ -0.4
SSBP2-216ENST00000512923 SRGAP3O43295 1099 aa12.53□□□□□ -0.4
SSBP2-216ENST00000512923 CSF1RP07333 972 aa12.53□□□□□ -0.4
SSBP2-216ENST00000512923 CCDC152Q4G0S7 254 aa12.53□□□□□ -0.4
SSBP2-216ENST00000512923 CCDC24Q8N4L8 307 aa12.53□□□□□ -0.4
SSBP2-216ENST00000512923 TTLL11Q8NHH1 800 aa12.53□□□□□ -0.4
SSBP2-216ENST00000512923 CCDC136Q96JN2 1154 aa12.53□□□□□ -0.4
SSBP2-216ENST00000512923 BRIP1Q9BX63 1249 aa12.53□□□□□ -0.4
SSBP2-216ENST00000512923 RTL9Q8NET4 1388 aa12.53□□□□□ -0.4
SSBP2-216ENST00000512923 C10orf71Q711Q0 1435 aa12.53□□□□□ -0.4
SSBP2-216ENST00000512923 COL11A2P13942 1736 aaPredicted RBP12.52□□□□□ -0.4
SSBP2-216ENST00000512923 PNMA6EA0A0J9YXQ4 647 aa12.52□□□□□ -0.41
SSBP2-216ENST00000512923 HDAC1Q13547 482 aaPredicted RBP12.52□□□□□ -0.41
SSBP2-216ENST00000512923 SF3B3Q15393 1217 aaKnown RBP12.52□□□□□ -0.41
SSBP2-216ENST00000512923 CCDC57Q2TAC2 916 aa12.52□□□□□ -0.41
SSBP2-216ENST00000512923 FAM161AQ3B820 660 aa12.52□□□□□ -0.41
SSBP2-216ENST00000512923 SSH3Q8TE77 659 aa12.52□□□□□ -0.41
SSBP2-216ENST00000512923 RWDD1Q9H446 243 aaPredicted RBP12.52□□□□□ -0.41
SSBP2-216ENST00000512923 LRP5O75197 1615 aa12.52□□□□□ -0.41
SSBP2-216ENST00000512923 DLEC1Q9Y238 1755 aa12.52□□□□□ -0.41
SSBP2-216ENST00000512923 SPEF2Q9C093 1822 aa12.52□□□□□ -0.41
SSBP2-216ENST00000512923 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
SSBP2-216ENST00000512923 PDE6BP35913 854 aa12.51□□□□□ -0.41
SSBP2-216ENST00000512923 IFIT5Q13325 482 aaKnown RBP12.51□□□□□ -0.41
SSBP2-216ENST00000512923 SIRT2Q8IXJ6 389 aa12.51□□□□□ -0.41
SSBP2-216ENST00000512923 GREM2Q9H772 168 aa12.51□□□□□ -0.41
SSBP2-216ENST00000512923 SPON1Q9HCB6 807 aa12.51□□□□□ -0.41
SSBP2-216ENST00000512923 PLSCR2Q9NRY7 297 aa12.51□□□□□ -0.41
SSBP2-216ENST00000512923 ANKRD18BA2A2Z9 1011 aa12.5□□□□□ -0.41
SSBP2-216ENST00000512923 ITGA6P23229 1130 aa12.5□□□□□ -0.41
SSBP2-216ENST00000512923 CRY2Q49AN0 593 aa12.5□□□□□ -0.41
SSBP2-216ENST00000512923 TAF7LQ5H9L4 462 aa12.5□□□□□ -0.41
SSBP2-216ENST00000512923 C3orf67Q6ZVT6 689 aa12.5□□□□□ -0.41
SSBP2-216ENST00000512923 RPGRQ92834 1020 aaKnown RBP12.5□□□□□ -0.41
SSBP2-216ENST00000512923 CCDC85AQ96PX6 553 aaPredicted RBP12.5□□□□□ -0.41
SSBP2-216ENST00000512923 PDZRN3Q9UPQ7 1066 aa12.5□□□□□ -0.41
SSBP2-216ENST00000512923 KLRG2A4D1S0 409 aaPredicted RBP12.49□□□□□ -0.41
SSBP2-216ENST00000512923 PTGER2P43116 358 aa12.49□□□□□ -0.41
SSBP2-216ENST00000512923 EFCAB3Q8N7B9 438 aa12.49□□□□□ -0.41
SSBP2-216ENST00000512923 CDC5LQ99459 802 aaKnown RBP12.49□□□□□ -0.41
SSBP2-216ENST00000512923 CACNA1SQ13698 1873 aa12.48□□□□□ -0.41
SSBP2-216ENST00000512923 KIAA1551Q9HCM1 1747 aa12.48□□□□□ -0.41
SSBP2-216ENST00000512923 RFX5P48382 616 aaPredicted RBP12.48□□□□□ -0.41
SSBP2-216ENST00000512923 HSP90AB4PQ58FF6 505 aa12.48□□□□□ -0.41
SSBP2-216ENST00000512923 B4GALNT3Q6L9W6 998 aa12.48□□□□□ -0.41
SSBP2-216ENST00000512923 DDX46Q7L014 1031 aaKnown RBP12.48□□□□□ -0.41
SSBP2-216ENST00000512923 GCC1Q96CN9 775 aa12.48□□□□□ -0.41
SSBP2-216ENST00000512923 L3MBTL3Q96JM7 780 aaPredicted RBP12.48□□□□□ -0.41
SSBP2-216ENST00000512923 COPRSQ9NQ92 184 aa12.48□□□□□ -0.41
SSBP2-216ENST00000512923 TAF1P21675 1872 aa12.48□□□□□ -0.41
SSBP2-216ENST00000512923 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.47□□□□□ -0.41
SSBP2-216ENST00000512923 SURF6O75683 361 aaKnown RBP12.47□□□□□ -0.41
SSBP2-216ENST00000512923 IGHDP01880 384 aa12.47□□□□□ -0.41
SSBP2-216ENST00000512923 SRGNP10124 158 aa12.47□□□□□ -0.41
SSBP2-216ENST00000512923 NPR1P16066 1061 aa12.47□□□□□ -0.41
SSBP2-216ENST00000512923 IGHMBP2P38935 993 aaKnown RBP12.47□□□□□ -0.41
SSBP2-216ENST00000512923 PTPN12Q05209 780 aaKnown RBP12.47□□□□□ -0.41
SSBP2-216ENST00000512923 CENPQQ7L2Z9 268 aaPredicted RBP12.47□□□□□ -0.41
SSBP2-216ENST00000512923 RBM17Q96I25 401 aaKnown RBP12.47□□□□□ -0.41
SSBP2-216ENST00000512923 ZFP91Q96JP5 570 aaPredicted RBP12.47□□□□□ -0.41
SSBP2-216ENST00000512923 A0A1B0GUL6 1792 aa12.47□□□□□ -0.41
SSBP2-216ENST00000512923 H0YIN7 160 aa12.46□□□□□ -0.41
SSBP2-216ENST00000512923 ST18O60284 1047 aa12.46□□□□□ -0.41
SSBP2-216ENST00000512923 HOXA10P31260 410 aaPredicted RBP12.46□□□□□ -0.41
SSBP2-216ENST00000512923 OS9Q13438 667 aaPredicted RBP12.46□□□□□ -0.41
SSBP2-216ENST00000512923 C2CD5Q86YS7 1000 aa12.46□□□□□ -0.41
SSBP2-216ENST00000512923 ANKRD18AQ8IVF6 992 aa12.46□□□□□ -0.41
SSBP2-216ENST00000512923 KLHDC4Q8TBB5 520 aa12.46□□□□□ -0.41
SSBP2-216ENST00000512923 MASTLQ96GX5 879 aa12.46□□□□□ -0.41
SSBP2-216ENST00000512923 MPHOSPH8Q99549 860 aa12.46□□□□□ -0.41
SSBP2-216ENST00000512923 DCTPP1Q9H773 170 aa12.46□□□□□ -0.41
SSBP2-216ENST00000512923 SEC31BQ9NQW1 1179 aa12.46□□□□□ -0.41
SSBP2-216ENST00000512923 PA2G4Q9UQ80 394 aaKnown RBP12.46□□□□□ -0.41
SSBP2-216ENST00000512923 NOP58Q9Y2X3 529 aaKnown RBP12.46□□□□□ -0.41
SSBP2-216ENST00000512923 KDM2BQ8NHM5 1336 aa12.45□□□□□ -0.42
SSBP2-216ENST00000512923 LRRC37AA6NMS7 1700 aa12.45□□□□□ -0.42
SSBP2-216ENST00000512923 COL4A1P02462 1669 aa12.45□□□□□ -0.42
SSBP2-216ENST00000512923 CIAO1O76071 339 aa12.45□□□□□ -0.42
SSBP2-216ENST00000512923 G3BP1Q13283 466 aaKnown RBP eCLIP12.45□□□□□ -0.42
SSBP2-216ENST00000512923 GRAPQ13588 217 aa12.45□□□□□ -0.42
SSBP2-216ENST00000512923 STYK1Q6J9G0 422 aa12.45□□□□□ -0.42
SSBP2-216ENST00000512923 LDHAL6AQ6ZMR3 332 aa12.45□□□□□ -0.42
SSBP2-216ENST00000512923 ERC1Q8IUD2 1116 aa12.45□□□□□ -0.42
SSBP2-216ENST00000512923 SMC5Q8IY18 1101 aa12.45□□□□□ -0.42
SSBP2-216ENST00000512923 GRAPLQ8TC17 118 aaPredicted RBP12.45□□□□□ -0.42
SSBP2-216ENST00000512923 ZNF594Q96JF6 807 aaPredicted RBP12.45□□□□□ -0.42
SSBP2-216ENST00000512923 CRAMP1Q96RY5 1269 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms