RNA–Protein interactions for RNA: ENST00000512805.5

RACK1-227, Transcript of receptor for activated C kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACK1, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-227ENST00000512805 CAP1Q01518 475 aa13.85□□□□□ -0.19
RACK1-227ENST00000512805 KIF4BQ2VIQ3 1234 aa13.85□□□□□ -0.19
RACK1-227ENST00000512805 SLC9C1Q4G0N8 1177 aa13.85□□□□□ -0.19
RACK1-227ENST00000512805 SULT6B1Q6IMI4 303 aa13.85□□□□□ -0.19
RACK1-227ENST00000512805 TMX4Q9H1E5 349 aaPredicted RBP13.85□□□□□ -0.19
RACK1-227ENST00000512805 RAPGEFL1Q9UHV5 662 aa13.85□□□□□ -0.19
RACK1-227ENST00000512805 PSMD14O00487 310 aa13.84□□□□□ -0.19
RACK1-227ENST00000512805 INHBEP58166 350 aa13.84□□□□□ -0.19
RACK1-227ENST00000512805 ZNF790Q6PG37 636 aa13.84□□□□□ -0.19
RACK1-227ENST00000512805 SHISA4Q96DD7 197 aa13.84□□□□□ -0.19
RACK1-227ENST00000512805 YTHDC1Q96MU7 727 aaKnown RBP13.84□□□□□ -0.19
RACK1-227ENST00000512805 HTATIP2Q9BUP3 242 aa13.84□□□□□ -0.19
RACK1-227ENST00000512805 NUDCQ9Y266 331 aa13.84□□□□□ -0.19
RACK1-227ENST00000512805 PRKAR2BP31323 418 aa13.83□□□□□ -0.2
RACK1-227ENST00000512805 MKRN3Q13064 507 aaKnown RBP13.83□□□□□ -0.2
RACK1-227ENST00000512805 IFNL1Q8IU54 200 aa13.83□□□□□ -0.2
RACK1-227ENST00000512805 NYXQ9GZU5 481 aa13.83□□□□□ -0.2
RACK1-227ENST00000512805 DPP8Q6V1X1 898 aaPredicted RBP13.82□□□□□ -0.2
RACK1-227ENST00000512805 NUTM1Q86Y26 1132 aa13.82□□□□□ -0.2
RACK1-227ENST00000512805 APAF1O14727 1248 aa13.81□□□□□ -0.2
RACK1-227ENST00000512805 BMP8BP34820 402 aa13.81□□□□□ -0.2
RACK1-227ENST00000512805 LRIT3Q3SXY7 679 aa13.81□□□□□ -0.2
RACK1-227ENST00000512805 ANGEL2Q5VTE6 544 aaKnown RBP13.81□□□□□ -0.2
RACK1-227ENST00000512805 SPRYD7Q5W111 196 aa13.81□□□□□ -0.2
RACK1-227ENST00000512805 PTCH2Q9Y6C5 1203 aa13.81□□□□□ -0.2
RACK1-227ENST00000512805 SP3Q02447 781 aa13.81□□□□□ -0.2
RACK1-227ENST00000512805 SP8Q8IXZ3 490 aa13.81□□□□□ -0.2
RACK1-227ENST00000512805 RUNDC1Q96C34 613 aa13.81□□□□□ -0.2
RACK1-227ENST00000512805 STAP2Q9UGK3 403 aa13.81□□□□□ -0.2
RACK1-227ENST00000512805 EYSQ5T1H1 3165 aa13.8□□□□□ -0.2
RACK1-227ENST00000512805 MANSC4A6NHS7 340 aaPredicted RBP13.8□□□□□ -0.2
RACK1-227ENST00000512805 HLFQ16534 295 aa13.8□□□□□ -0.2
RACK1-227ENST00000512805 FMNL2Q96PY5 1086 aa13.8□□□□□ -0.2
RACK1-227ENST00000512805 RRP7AQ9Y3A4 280 aaKnown RBP13.8□□□□□ -0.2
RACK1-227ENST00000512805 ZNF646O15015 1829 aaPredicted RBP13.8□□□□□ -0.2
RACK1-227ENST00000512805 RPTORQ8N122 1335 aa13.79□□□□□ -0.2
RACK1-227ENST00000512805 IGF2BP3O00425 579 aaKnown RBP eCLIP13.79□□□□□ -0.24e-7■■□□□ 11.9
RACK1-227ENST00000512805 PIP4K2AP48426 406 aaPredicted RBP13.79□□□□□ -0.2
RACK1-227ENST00000512805 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
RACK1-227ENST00000512805 TCIRG1Q13488 830 aa13.79□□□□□ -0.2
RACK1-227ENST00000512805 SCARF1Q14162 830 aa13.79□□□□□ -0.2
RACK1-227ENST00000512805 USP16Q9Y5T5 823 aa13.79□□□□□ -0.2
RACK1-227ENST00000512805 PRUNE2Q8WUY3 3088 aa13.79□□□□□ -0.2
RACK1-227ENST00000512805 LAMB1P07942 1786 aa13.79□□□□□ -0.2
RACK1-227ENST00000512805 IBTKQ9P2D0 1353 aaPredicted RBP13.78□□□□□ -0.2
RACK1-227ENST00000512805 PTPN12Q05209 780 aaKnown RBP13.78□□□□□ -0.2
RACK1-227ENST00000512805 MTHFSDQ2M296 383 aaKnown RBP13.78□□□□□ -0.2
RACK1-227ENST00000512805 C3orf67Q6ZVT6 689 aa13.78□□□□□ -0.2
RACK1-227ENST00000512805 NECTIN2Q92692 538 aa13.78□□□□□ -0.2
RACK1-227ENST00000512805 GDF15Q99988 308 aa13.78□□□□□ -0.2
RACK1-227ENST00000512805 ZNF521Q96K83 1311 aa13.78□□□□□ -0.2
RACK1-227ENST00000512805 BBOX1O75936 387 aa13.77□□□□□ -0.21
RACK1-227ENST00000512805 MYCP01106 439 aaPredicted RBP13.77□□□□□ -0.21
RACK1-227ENST00000512805 TMPOP42166 694 aaKnown RBP13.77□□□□□ -0.21
RACK1-227ENST00000512805 ZNF280AP59817 542 aaPredicted RBP13.77□□□□□ -0.21
RACK1-227ENST00000512805 CRHR2Q13324 411 aa13.77□□□□□ -0.21
RACK1-227ENST00000512805 LDLRAD1Q5T700 205 aa13.77□□□□□ -0.21
RACK1-227ENST00000512805 SYMPKQ92797 1274 aaKnown RBP13.77□□□□□ -0.21
RACK1-227ENST00000512805 TRIM35Q9UPQ4 493 aa13.77□□□□□ -0.21
RACK1-227ENST00000512805 SALL2Q9Y467 1007 aaPredicted RBP13.77□□□□□ -0.21
RACK1-227ENST00000512805 RTL9Q8NET4 1388 aa13.76□□□□□ -0.21
RACK1-227ENST00000512805 DUOX1Q9NRD9 1551 aa13.76□□□□□ -0.21
RACK1-227ENST00000512805 ARHGEF6Q15052 776 aa13.76□□□□□ -0.21
RACK1-227ENST00000512805 NKX2-3Q8TAU0 364 aa13.76□□□□□ -0.21
RACK1-227ENST00000512805 TTLL12Q14166 644 aaPredicted RBP13.75□□□□□ -0.21
RACK1-227ENST00000512805 SH3TC2Q8TF17 1288 aa13.75□□□□□ -0.21
RACK1-227ENST00000512805 SNX27Q96L92 541 aa13.75□□□□□ -0.21
RACK1-227ENST00000512805 KCNQ5Q9NR82 932 aa13.75□□□□□ -0.21
RACK1-227ENST00000512805 ABCC4O15439 1325 aa13.75□□□□□ -0.21
RACK1-227ENST00000512805 SYNGAP1Q96PV0 1343 aa13.75□□□□□ -0.21
RACK1-227ENST00000512805 SIPA1L3O60292 1781 aaPredicted RBP13.75□□□□□ -0.21
RACK1-227ENST00000512805 NBPF26B4DH59 902 aa13.74□□□□□ -0.21
RACK1-227ENST00000512805 VIL1P09327 827 aaKnown RBP13.74□□□□□ -0.21
RACK1-227ENST00000512805 GJA8P48165 433 aa13.74□□□□□ -0.21
RACK1-227ENST00000512805 NFE2L2Q16236 605 aa13.74□□□□□ -0.21
RACK1-227ENST00000512805 PRAMEF18Q5VWM3 479 aa13.74□□□□□ -0.21
RACK1-227ENST00000512805 NBPF10Q6P3W6 841 aaKnown RBP13.74□□□□□ -0.21
RACK1-227ENST00000512805 GUCD1Q96NT3 240 aa13.74□□□□□ -0.21
RACK1-227ENST00000512805 SPINK5Q9NQ38 1064 aaPredicted RBP13.74□□□□□ -0.21
RACK1-227ENST00000512805 TAF1P21675 1872 aa13.74□□□□□ -0.21
RACK1-227ENST00000512805 ZBTB48P10074 688 aaPredicted RBP13.73□□□□□ -0.21
RACK1-227ENST00000512805 NEUROD2Q15784 382 aa13.73□□□□□ -0.21
RACK1-227ENST00000512805 DBNDD1Q9H9R9 158 aa13.73□□□□□ -0.21
RACK1-227ENST00000512805 LAMA2P24043 3122 aaKnown RBP13.73□□□□□ -0.21
RACK1-227ENST00000512805 EVI5O60447 810 aa13.73□□□□□ -0.21
RACK1-227ENST00000512805 BCAMP50895 628 aa13.73□□□□□ -0.21
RACK1-227ENST00000512805 FAM109BQ6ICB4 259 aaPredicted RBP13.73□□□□□ -0.21
RACK1-227ENST00000512805 NLRP3Q96P20 1036 aa13.73□□□□□ -0.21
RACK1-227ENST00000512805 THUMPD2Q9BTF0 503 aaKnown RBP13.73□□□□□ -0.21
RACK1-227ENST00000512805 ZBED9Q6R2W3 1325 aa13.72□□□□□ -0.21
RACK1-227ENST00000512805 ERVV-1B6SEH8 477 aa13.72□□□□□ -0.21
RACK1-227ENST00000512805 POTEB2H3BUK9 544 aa13.72□□□□□ -0.21
RACK1-227ENST00000512805 GJB1P08034 283 aa13.72□□□□□ -0.21
RACK1-227ENST00000512805 NF2P35240 595 aa13.72□□□□□ -0.21
RACK1-227ENST00000512805 RIPK4P57078 832 aa13.72□□□□□ -0.21
RACK1-227ENST00000512805 TEFQ10587 303 aa13.72□□□□□ -0.21
RACK1-227ENST00000512805 DCTN1Q14203 1278 aa13.72□□□□□ -0.21
RACK1-227ENST00000512805 MTFR1Q15390 333 aa13.72□□□□□ -0.21
RACK1-227ENST00000512805 WASHC4Q2M389 1173 aa13.72□□□□□ -0.21
RACK1-227ENST00000512805 SUSD4Q5VX71 490 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms