RNA–Protein interactions for RNA: ENST00000511988.5

SUB1-210, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-210ENST00000511988 SURF6O75683 361 aaKnown RBP12.59□□□□□ -0.39
SUB1-210ENST00000511988 CIAO1O76071 339 aa12.59□□□□□ -0.39
SUB1-210ENST00000511988 PTPN12Q05209 780 aaKnown RBP12.59□□□□□ -0.39
SUB1-210ENST00000511988 OS9Q13438 667 aaPredicted RBP12.59□□□□□ -0.39
SUB1-210ENST00000511988 CRY2Q49AN0 593 aa12.59□□□□□ -0.39
SUB1-210ENST00000511988 ZBTB47Q9UFB7 747 aaPredicted RBP12.59□□□□□ -0.39
SUB1-210ENST00000511988 EXOC6BQ9Y2D4 811 aa12.59□□□□□ -0.39
SUB1-210ENST00000511988 LRRC37AA6NMS7 1700 aa12.59□□□□□ -0.39
SUB1-210ENST00000511988 KLRG2A4D1S0 409 aaPredicted RBP12.58□□□□□ -0.4
SUB1-210ENST00000511988 PDE6BP35913 854 aa12.58□□□□□ -0.4
SUB1-210ENST00000511988 CTCFP49711 727 aaPredicted RBP12.58□□□□□ -0.4
SUB1-210ENST00000511988 RGS19P49795 217 aa12.58□□□□□ -0.4
SUB1-210ENST00000511988 NUCB1Q02818 461 aa12.58□□□□□ -0.4
SUB1-210ENST00000511988 G3BP1Q13283 466 aaKnown RBP eCLIP12.58□□□□□ -0.4
SUB1-210ENST00000511988 C9orf131Q5VYM1 1079 aa12.58□□□□□ -0.4
SUB1-210ENST00000511988 C3orf67Q6ZVT6 689 aa12.58□□□□□ -0.4
SUB1-210ENST00000511988 KIF1BPQ96EK5 621 aa12.58□□□□□ -0.4
SUB1-210ENST00000511988 LRRCC1Q9C099 1032 aa12.58□□□□□ -0.4
SUB1-210ENST00000511988 MKRN1Q9UHC7 482 aaKnown RBP12.58□□□□□ -0.4
SUB1-210ENST00000511988 PDZRN3Q9UPQ7 1066 aa12.58□□□□□ -0.4
SUB1-210ENST00000511988 ARAP2Q8WZ64 1704 aa12.57□□□□□ -0.4
SUB1-210ENST00000511988 EYA2O00167 538 aa12.57□□□□□ -0.4
SUB1-210ENST00000511988 IGHMBP2P38935 993 aaKnown RBP12.57□□□□□ -0.4
SUB1-210ENST00000511988 IL15P40933 162 aaPredicted RBP12.57□□□□□ -0.4
SUB1-210ENST00000511988 DDX46Q7L014 1031 aaKnown RBP12.57□□□□□ -0.4
SUB1-210ENST00000511988 RPGRQ92834 1020 aaKnown RBP12.57□□□□□ -0.4
SUB1-210ENST00000511988 CCDC85AQ96PX6 553 aaPredicted RBP12.57□□□□□ -0.4
SUB1-210ENST00000511988 PA2G4Q9UQ80 394 aaKnown RBP12.57□□□□□ -0.4
SUB1-210ENST00000511988 BCS1LQ9Y276 419 aa12.57□□□□□ -0.4
SUB1-210ENST00000511988 LBX1P52954 281 aa12.56□□□□□ -0.4
SUB1-210ENST00000511988 CHD1LQ86WJ1 897 aa12.56□□□□□ -0.4
SUB1-210ENST00000511988 CCDC24Q8N4L8 307 aa12.56□□□□□ -0.4
SUB1-210ENST00000511988 KLHDC4Q8TBB5 520 aa12.56□□□□□ -0.4
SUB1-210ENST00000511988 AIDAQ96BJ3 306 aa12.56□□□□□ -0.4
SUB1-210ENST00000511988 SIL1Q9H173 461 aa12.56□□□□□ -0.4
SUB1-210ENST00000511988 COL4A1P02462 1669 aa12.56□□□□□ -0.4
SUB1-210ENST00000511988 TAF1P21675 1872 aa12.56□□□□□ -0.4
SUB1-210ENST00000511988 KIAA1551Q9HCM1 1747 aa12.56□□□□□ -0.4
SUB1-210ENST00000511988 ZNF609O15014 1411 aa12.55□□□□□ -0.4
SUB1-210ENST00000511988 CACNA1SQ13698 1873 aa12.55□□□□□ -0.4
SUB1-210ENST00000511988 HOXA10P31260 410 aaPredicted RBP12.55□□□□□ -0.4
SUB1-210ENST00000511988 HOXD11P31277 338 aaPredicted RBP12.55□□□□□ -0.4
SUB1-210ENST00000511988 ANKRD45Q5TZF3 282 aa12.55□□□□□ -0.4
SUB1-210ENST00000511988 LDHAL6AQ6ZMR3 332 aa12.55□□□□□ -0.4
SUB1-210ENST00000511988 ANKRD18AQ8IVF6 992 aa12.55□□□□□ -0.4
SUB1-210ENST00000511988 RHPN1Q8TCX5 695 aa12.55□□□□□ -0.4
SUB1-210ENST00000511988 RBM17Q96I25 401 aaKnown RBP12.55□□□□□ -0.4
SUB1-210ENST00000511988 MPHOSPH8Q99549 860 aa12.55□□□□□ -0.4
SUB1-210ENST00000511988 SEC31BQ9NQW1 1179 aa12.55□□□□□ -0.4
SUB1-210ENST00000511988 CNNM1Q9NRU3 951 aa12.55□□□□□ -0.4
SUB1-210ENST00000511988 NPR1P16066 1061 aa12.54□□□□□ -0.4
SUB1-210ENST00000511988 GRAPQ13588 217 aa12.54□□□□□ -0.4
SUB1-210ENST00000511988 ATG9AQ7Z3C6 839 aa12.54□□□□□ -0.4
SUB1-210ENST00000511988 TMC4Q7Z404 712 aa12.54□□□□□ -0.4
SUB1-210ENST00000511988 GRAPLQ8TC17 118 aaPredicted RBP12.54□□□□□ -0.4
SUB1-210ENST00000511988 ZNF594Q96JF6 807 aaPredicted RBP12.54□□□□□ -0.4
SUB1-210ENST00000511988 CRAMP1Q96RY5 1269 aa12.54□□□□□ -0.4
SUB1-210ENST00000511988 MROH5Q6ZUA9 1318 aa12.54□□□□□ -0.4
SUB1-210ENST00000511988 APBB1O00213 710 aa12.53□□□□□ -0.4
SUB1-210ENST00000511988 SRGNP10124 158 aa12.53□□□□□ -0.4
SUB1-210ENST00000511988 CLASRPQ8N2M8 674 aaKnown RBP12.53□□□□□ -0.4
SUB1-210ENST00000511988 CNKSR2Q8WXI2 1034 aa12.53□□□□□ -0.4
SUB1-210ENST00000511988 MASTLQ96GX5 879 aa12.53□□□□□ -0.4
SUB1-210ENST00000511988 LNPKQ9C0E8 428 aa12.53□□□□□ -0.4
SUB1-210ENST00000511988 GPR108Q9NPR9 543 aa12.53□□□□□ -0.4
SUB1-210ENST00000511988 BSDC1Q9NW68 430 aaPredicted RBP12.53□□□□□ -0.4
SUB1-210ENST00000511988 BRCA1P38398 1863 aaKnown RBP12.53□□□□□ -0.4
SUB1-210ENST00000511988 LTBP1Q14766 1721 aa12.52□□□□□ -0.41
SUB1-210ENST00000511988 H0YIN7 160 aa12.52□□□□□ -0.41
SUB1-210ENST00000511988 SASH1O94885 1247 aa12.52□□□□□ -0.41
SUB1-210ENST00000511988 RPS8P62241 208 aaKnown RBP12.52□□□□□ -0.41
SUB1-210ENST00000511988 LRRC24Q50LG9 513 aa12.52□□□□□ -0.41
SUB1-210ENST00000511988 METTL24Q5JXM2 366 aa12.52□□□□□ -0.41
SUB1-210ENST00000511988 STYK1Q6J9G0 422 aa12.52□□□□□ -0.41
SUB1-210ENST00000511988 C2CD5Q86YS7 1000 aa12.52□□□□□ -0.41
SUB1-210ENST00000511988 CELF1Q92879 486 aaKnown RBP12.52□□□□□ -0.41
SUB1-210ENST00000511988 CEP126Q9P2H0 1117 aa12.52□□□□□ -0.41
SUB1-210ENST00000511988 RIPOR2Q9Y4F9 1068 aa12.52□□□□□ -0.41
SUB1-210ENST00000511988 SMARCA5O60264 1052 aaPredicted RBP12.51□□□□□ -0.41
SUB1-210ENST00000511988 ALDH1B1P30837 517 aa12.51□□□□□ -0.41
SUB1-210ENST00000511988 TFCP2Q12800 502 aa12.51□□□□□ -0.41
SUB1-210ENST00000511988 PUS3Q9BZE2 481 aaKnown RBP12.51□□□□□ -0.41
SUB1-210ENST00000511988 IL1RAPL2Q9NP60 686 aa12.51□□□□□ -0.41
SUB1-210ENST00000511988 RNF181Q9P0P0 153 aa12.51□□□□□ -0.41
SUB1-210ENST00000511988 AKAP2Q9Y2D5 859 aa12.51□□□□□ -0.41
SUB1-210ENST00000511988 BBOX1O75936 387 aa12.5□□□□□ -0.41
SUB1-210ENST00000511988 TNNI3KQ59H18 835 aa12.5□□□□□ -0.41
SUB1-210ENST00000511988 VGLL2Q8N8G2 317 aa12.5□□□□□ -0.41
SUB1-210ENST00000511988 GPATCH3Q96I76 525 aa12.5□□□□□ -0.41
SUB1-210ENST00000511988 ANKRD2Q9GZV1 360 aa12.5□□□□□ -0.41
SUB1-210ENST00000511988 FPGT-TNNI3KV9GXZ4 949 aa12.5□□□□□ -0.41
SUB1-210ENST00000511988 AOX1Q06278 1338 aa12.5□□□□□ -0.41
SUB1-210ENST00000511988 TNRC18O15417 2968 aaPredicted RBP12.49□□□□□ -0.41
SUB1-210ENST00000511988 SALL3Q9BXA9 1300 aa12.49□□□□□ -0.41
SUB1-210ENST00000511988 A0A0G2JLW4 131 aa12.49□□□□□ -0.41
SUB1-210ENST00000511988 PPEF1O14829 653 aaPredicted RBP12.49□□□□□ -0.41
SUB1-210ENST00000511988 PDE8BO95263 885 aa12.49□□□□□ -0.41
SUB1-210ENST00000511988 IFIT2P09913 472 aaKnown RBP12.49□□□□□ -0.41
SUB1-210ENST00000511988 PDE4AP27815 886 aa12.49□□□□□ -0.41
SUB1-210ENST00000511988 TGFB2P61812 414 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms