RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 POLLQ9UGP5 575 aa15.95■□□□□ 0.14
COPS4-210ENST00000511708 COL4A1P02462 1669 aa15.95■□□□□ 0.14
COPS4-210ENST00000511708 LAMB1P07942 1786 aa15.95■□□□□ 0.14
COPS4-210ENST00000511708 PITPNM2Q9BZ72 1349 aa15.94■□□□□ 0.14
COPS4-210ENST00000511708 RANBP2P49792 3224 aaKnown RBP15.94■□□□□ 0.14
COPS4-210ENST00000511708 UBE2Q2LH0YL09 131 aa15.94■□□□□ 0.14
COPS4-210ENST00000511708 RIMBP2O15034 1052 aa15.94■□□□□ 0.14
COPS4-210ENST00000511708 SCARF1Q14162 830 aa15.94■□□□□ 0.14
COPS4-210ENST00000511708 DOK7Q18PE1 504 aa15.93■□□□□ 0.14
COPS4-210ENST00000511708 NLRP10Q86W26 655 aa15.93■□□□□ 0.14
COPS4-210ENST00000511708 PNISRQ8TF01 805 aaKnown RBP15.93■□□□□ 0.14
COPS4-210ENST00000511708 NSFL1CQ9UNZ2 370 aaKnown RBP15.93■□□□□ 0.14
COPS4-210ENST00000511708 COL6A3P12111 3177 aa15.93■□□□□ 0.14
COPS4-210ENST00000511708 DLL1O00548 723 aa15.92■□□□□ 0.14
COPS4-210ENST00000511708 SREBF2Q12772 1141 aa15.92■□□□□ 0.14
COPS4-210ENST00000511708 OTOP1Q7RTM1 612 aa15.92■□□□□ 0.14
COPS4-210ENST00000511708 C6orf229H3BNL8 230 aa15.91■□□□□ 0.14
COPS4-210ENST00000511708 GPSM2P81274 684 aa15.91■□□□□ 0.14
COPS4-210ENST00000511708 PDIA6Q15084 440 aa15.91■□□□□ 0.14
COPS4-210ENST00000511708 NECTIN2Q92692 538 aa15.91■□□□□ 0.14
COPS4-210ENST00000511708 EYA3Q99504 573 aa15.91■□□□□ 0.14
COPS4-210ENST00000511708 TRIM17Q9Y577 477 aa15.91■□□□□ 0.14
COPS4-210ENST00000511708 SH3TC1Q8TE82 1336 aa15.91■□□□□ 0.14
COPS4-210ENST00000511708 EN2P19622 333 aaPredicted RBP15.9■□□□□ 0.14
COPS4-210ENST00000511708 AGBL3Q8NEM8 1001 aa15.9■□□□□ 0.14
COPS4-210ENST00000511708 TBC1D16Q8TBP0 767 aa15.9■□□□□ 0.14
COPS4-210ENST00000511708 CELF1Q92879 486 aaKnown RBP15.9■□□□□ 0.14
COPS4-210ENST00000511708 ARMC5Q96C12 935 aa15.9■□□□□ 0.14
COPS4-210ENST00000511708 GMLQ99445 158 aa15.9■□□□□ 0.14
COPS4-210ENST00000511708 THUMPD2Q9BTF0 503 aaKnown RBP15.9■□□□□ 0.14
COPS4-210ENST00000511708 MKRN3Q13064 507 aaKnown RBP15.89■□□□□ 0.13
COPS4-210ENST00000511708 HSP90AB3PQ58FF7 597 aa15.89■□□□□ 0.13
COPS4-210ENST00000511708 RSBN1LQ6PCB5 846 aaPredicted RBP15.89■□□□□ 0.13
COPS4-210ENST00000511708 OTUD5Q96G74 571 aa15.89■□□□□ 0.13
COPS4-210ENST00000511708 TRMT112Q9UI30 125 aaKnown RBP15.89■□□□□ 0.13
COPS4-210ENST00000511708 ALDH1A1P00352 501 aa15.88■□□□□ 0.13
COPS4-210ENST00000511708 U2AF1L5P0DN76 240 aaPredicted RBP15.88■□□□□ 0.13
COPS4-210ENST00000511708 U2AF1Q01081 240 aaKnown RBP eCLIP15.88■□□□□ 0.13
COPS4-210ENST00000511708 PROSER3Q2NL68 480 aa15.88■□□□□ 0.13
COPS4-210ENST00000511708 MYOZ2Q9NPC6 264 aa15.88■□□□□ 0.13
COPS4-210ENST00000511708 SCAF8Q9UPN6 1271 aaKnown RBP15.88■□□□□ 0.13
COPS4-210ENST00000511708 NUDCQ9Y266 331 aa15.88■□□□□ 0.13
COPS4-210ENST00000511708 PTPN22Q9Y2R2 807 aa15.88■□□□□ 0.13
COPS4-210ENST00000511708 ZNF646O15015 1829 aaPredicted RBP15.88■□□□□ 0.13
COPS4-210ENST00000511708 TCIRG1Q13488 830 aa15.87■□□□□ 0.13
COPS4-210ENST00000511708 SF3B3Q15393 1217 aaKnown RBP15.87■□□□□ 0.13
COPS4-210ENST00000511708 PRAMEF18Q5VWM3 479 aa15.87■□□□□ 0.13
COPS4-210ENST00000511708 CFAP53Q96M91 514 aa15.87■□□□□ 0.13
COPS4-210ENST00000511708 USP17L8P0C7I0 530 aa15.86■□□□□ 0.13
COPS4-210ENST00000511708 PTPN12Q05209 780 aaKnown RBP15.86■□□□□ 0.13
COPS4-210ENST00000511708 SPRYD7Q5W111 196 aa15.86■□□□□ 0.13
COPS4-210ENST00000511708 ZC3H12CQ9C0D7 883 aaKnown RBP15.86■□□□□ 0.13
COPS4-210ENST00000511708 PODXL2Q9NZ53 605 aa15.86■□□□□ 0.13
COPS4-210ENST00000511708 ANXA1P04083 346 aa15.85■□□□□ 0.13
COPS4-210ENST00000511708 TTLL12Q14166 644 aaPredicted RBP15.85■□□□□ 0.13
COPS4-210ENST00000511708 LDLRAD1Q5T700 205 aa15.84■□□□□ 0.13
COPS4-210ENST00000511708 IFNL1Q8IU54 200 aa15.84■□□□□ 0.13
COPS4-210ENST00000511708 SLC17A8Q8NDX2 589 aa15.84■□□□□ 0.13
COPS4-210ENST00000511708 CLSPNQ9HAW4 1339 aa15.84■□□□□ 0.13
COPS4-210ENST00000511708 H0YGN5 161 aa15.83■□□□□ 0.12
COPS4-210ENST00000511708 INHBEP58166 350 aa15.83■□□□□ 0.12
COPS4-210ENST00000511708 NBPF9Q3BBW0 867 aa15.83■□□□□ 0.12
COPS4-210ENST00000511708 COPS6Q7L5N1 327 aa15.83■□□□□ 0.12
COPS4-210ENST00000511708 ERO1AQ96HE7 468 aa15.83■□□□□ 0.12
COPS4-210ENST00000511708 MANSC4A6NHS7 340 aaPredicted RBP15.82■□□□□ 0.12
COPS4-210ENST00000511708 NF2P35240 595 aa15.82■□□□□ 0.12
COPS4-210ENST00000511708 RPS8P62241 208 aaKnown RBP15.82■□□□□ 0.12
COPS4-210ENST00000511708 CNGB1Q14028 1251 aaPredicted RBP15.82■□□□□ 0.12
COPS4-210ENST00000511708 XAGE3Q8WTP9 111 aa15.82■□□□□ 0.12
COPS4-210ENST00000511708 ZNF333Q96JL9 665 aa15.82■□□□□ 0.12
COPS4-210ENST00000511708 IGF2BP3O00425 579 aaKnown RBP eCLIP15.81■□□□□ 0.12
COPS4-210ENST00000511708 UFL1O94874 794 aa15.81■□□□□ 0.12
COPS4-210ENST00000511708 EIF2S2P20042 333 aaKnown RBP15.81■□□□□ 0.12
COPS4-210ENST00000511708 CAP1Q01518 475 aa15.81■□□□□ 0.12
COPS4-210ENST00000511708 ARMC9Q7Z3E5 817 aa15.81■□□□□ 0.12
COPS4-210ENST00000511708 CD99L2Q8TCZ2 262 aa15.81■□□□□ 0.12
COPS4-210ENST00000511708 TMEM106CQ9BVX2 250 aa15.81■□□□□ 0.12
COPS4-210ENST00000511708 G3V3G9 751 aa15.8■□□□□ 0.12
COPS4-210ENST00000511708 WNT10BO00744 389 aa15.8■□□□□ 0.12
COPS4-210ENST00000511708 DCAF8Q5TAQ9 597 aa15.8■□□□□ 0.12
COPS4-210ENST00000511708 EFCC1Q9HA90 598 aa15.8■□□□□ 0.12
COPS4-210ENST00000511708 USP17L3A6NCW0 530 aa15.79■□□□□ 0.12
COPS4-210ENST00000511708 USP17L4A6NCW7 530 aa15.79■□□□□ 0.12
COPS4-210ENST00000511708 AIMP1Q12904 312 aaKnown RBP15.79■□□□□ 0.12
COPS4-210ENST00000511708 CHRDL2Q6WN34 429 aa15.79■□□□□ 0.12
COPS4-210ENST00000511708 USP17L1Q7RTZ2 530 aa15.79■□□□□ 0.12
COPS4-210ENST00000511708 ZNF428Q96B54 188 aa15.79■□□□□ 0.12
COPS4-210ENST00000511708 FAM89AQ96GI7 184 aa15.79■□□□□ 0.12
COPS4-210ENST00000511708 ISCA1Q9BUE6 129 aa15.79■□□□□ 0.12
COPS4-210ENST00000511708 GGA1Q9UJY5 639 aa15.79■□□□□ 0.12
COPS4-210ENST00000511708 ZBTB48P10074 688 aaPredicted RBP15.78■□□□□ 0.12
COPS4-210ENST00000511708 PODNQ7Z5L7 613 aa15.78■□□□□ 0.12
COPS4-210ENST00000511708 RBM27Q9P2N5 1060 aaKnown RBP15.78■□□□□ 0.12
COPS4-210ENST00000511708 LAMA3Q16787 3333 aa15.78■□□□□ 0.12
COPS4-210ENST00000511708 CRHR2Q13324 411 aa15.77■□□□□ 0.12
COPS4-210ENST00000511708 PRKG1Q13976 671 aa15.77■□□□□ 0.12
COPS4-210ENST00000511708 MAP3K11Q16584 847 aa15.77■□□□□ 0.12
COPS4-210ENST00000511708 WNK4Q96J92 1243 aa15.77■□□□□ 0.12
COPS4-210ENST00000511708 PRO3102Q9H379 93 aa15.77■□□□□ 0.12
COPS4-210ENST00000511708 ANKIB1Q9P2G1 1089 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms