RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 P4HBP07237 508 aaKnown RBP5.78□□□□□ -1.48
TRAPPC11-207ENST00000511409 GRNP28799 593 aaKnown RBP5.78□□□□□ -1.48
TRAPPC11-207ENST00000511409 ELOA3BQ3SY89 546 aa5.78□□□□□ -1.48
TRAPPC11-207ENST00000511409 ZNF326Q5BKZ1 582 aaKnown RBP5.78□□□□□ -1.48
TRAPPC11-207ENST00000511409 PDE12Q6L8Q7 609 aaKnown RBP5.78□□□□□ -1.48
TRAPPC11-207ENST00000511409 ELOA3Q8NG57 546 aa5.78□□□□□ -1.48
TRAPPC11-207ENST00000511409 ZNF428Q96B54 188 aa5.78□□□□□ -1.48
TRAPPC11-207ENST00000511409 SLC30A3Q99726 388 aa5.78□□□□□ -1.48
TRAPPC11-207ENST00000511409 ELP3Q9H9T3 547 aa5.78□□□□□ -1.48
TRAPPC11-207ENST00000511409 AMOTL2Q9Y2J4 779 aa5.78□□□□□ -1.48
TRAPPC11-207ENST00000511409 EGFRP00533 1210 aa5.77□□□□□ -1.49
TRAPPC11-207ENST00000511409 ITGB7P26010 798 aa5.77□□□□□ -1.49
TRAPPC11-207ENST00000511409 TARSP26639 723 aaKnown RBP5.77□□□□□ -1.49
TRAPPC11-207ENST00000511409 DGKGP49619 791 aa5.77□□□□□ -1.49
TRAPPC11-207ENST00000511409 PCBP4P57723 403 aaKnown RBP5.77□□□□□ -1.49
TRAPPC11-207ENST00000511409 ATP2B2Q01814 1243 aa5.77□□□□□ -1.49
TRAPPC11-207ENST00000511409 ORC1Q13415 861 aa5.77□□□□□ -1.49
TRAPPC11-207ENST00000511409 CCINQ13939 588 aa5.77□□□□□ -1.49
TRAPPC11-207ENST00000511409 GRIN2CQ14957 1233 aa5.77□□□□□ -1.49
TRAPPC11-207ENST00000511409 TTC39BQ5VTQ0 682 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC11-207ENST00000511409 RAB44Q7Z6P3 723 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC11-207ENST00000511409 NLRP13Q86W25 1043 aa5.77□□□□□ -1.49
TRAPPC11-207ENST00000511409 BHMTQ93088 406 aa5.77□□□□□ -1.49
TRAPPC11-207ENST00000511409 GSX2Q9BZM3 304 aa5.77□□□□□ -1.49
TRAPPC11-207ENST00000511409 NOP53Q9NZM5 478 aaKnown RBP5.77□□□□□ -1.49
TRAPPC11-207ENST00000511409 FOXD3Q9UJU5 478 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC11-207ENST00000511409 PNMA6FA0A0J9YX94 578 aa5.76□□□□□ -1.49
TRAPPC11-207ENST00000511409 PHACTR2O75167 634 aa5.76□□□□□ -1.49
TRAPPC11-207ENST00000511409 TNFRSF21O75509 655 aa5.76□□□□□ -1.49
TRAPPC11-207ENST00000511409 MAP3K6O95382 1288 aa5.76□□□□□ -1.49
TRAPPC11-207ENST00000511409 LDHBP07195 334 aaKnown RBP5.76□□□□□ -1.49
TRAPPC11-207ENST00000511409 RARAP10276 462 aa5.76□□□□□ -1.49
TRAPPC11-207ENST00000511409 NFKB1P19838 968 aa5.76□□□□□ -1.49
TRAPPC11-207ENST00000511409 DSC3Q14574 896 aa5.76□□□□□ -1.49
TRAPPC11-207ENST00000511409 CHSY3Q70JA7 882 aa5.76□□□□□ -1.49
TRAPPC11-207ENST00000511409 SNX29Q8TEQ0 813 aa5.76□□□□□ -1.49
TRAPPC11-207ENST00000511409 ALKBH8Q96BT7 664 aaKnown RBP5.76□□□□□ -1.49
TRAPPC11-207ENST00000511409 PRDM6Q9NQX0 595 aa5.76□□□□□ -1.49
TRAPPC11-207ENST00000511409 ABI2Q9NYB9 513 aaPredicted RBP5.76□□□□□ -1.49
TRAPPC11-207ENST00000511409 TMEM63CQ9P1W3 806 aa5.76□□□□□ -1.49
TRAPPC11-207ENST00000511409 C1QTNF9BB2RNN3 333 aa5.75□□□□□ -1.49
TRAPPC11-207ENST00000511409 EIF1AYO14602 144 aaKnown RBP5.75□□□□□ -1.49
TRAPPC11-207ENST00000511409 IGHA2P01877 340 aa5.75□□□□□ -1.49
TRAPPC11-207ENST00000511409 ZNF16P17020 682 aaPredicted RBP5.75□□□□□ -1.49
TRAPPC11-207ENST00000511409 ALAS2P22557 587 aa5.75□□□□□ -1.49
TRAPPC11-207ENST00000511409 TAGLNQ01995 201 aaKnown RBP5.75□□□□□ -1.49
TRAPPC11-207ENST00000511409 FMR1Q06787 632 aaKnown RBP eCLIP5.75□□□□□ -1.49
TRAPPC11-207ENST00000511409 COL19A1Q14993 1142 aa5.75□□□□□ -1.49
TRAPPC11-207ENST00000511409 XKR5Q6UX68 686 aa5.75□□□□□ -1.49
TRAPPC11-207ENST00000511409 FBXO33Q7Z6M2 555 aa5.75□□□□□ -1.49
TRAPPC11-207ENST00000511409 CD163Q86VB7 1156 aa5.75□□□□□ -1.49
TRAPPC11-207ENST00000511409 CSRNP1Q96S65 589 aa5.75□□□□□ -1.49
TRAPPC11-207ENST00000511409 BCL11AQ9H165 835 aa5.75□□□□□ -1.49
TRAPPC11-207ENST00000511409 SUV39H2Q9H5I1 410 aa5.75□□□□□ -1.49
TRAPPC11-207ENST00000511409 IGFLR1Q9H665 355 aa5.75□□□□□ -1.49
TRAPPC11-207ENST00000511409 RRAGCQ9HB90 399 aa5.75□□□□□ -1.49
TRAPPC11-207ENST00000511409 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.75□□□□□ -1.49
TRAPPC11-207ENST00000511409 RBM47A0AV96 593 aaKnown RBP5.74□□□□□ -1.49
TRAPPC11-207ENST00000511409 CPNE3O75131 537 aaKnown RBP5.74□□□□□ -1.49
TRAPPC11-207ENST00000511409 CES1P23141 567 aa5.74□□□□□ -1.49
TRAPPC11-207ENST00000511409 TBC1D8BQ0IIM8 1120 aa5.74□□□□□ -1.49
TRAPPC11-207ENST00000511409 C1orf127Q8N9H9 656 aa5.74□□□□□ -1.49
TRAPPC11-207ENST00000511409 CNTN3Q9P232 1028 aa5.74□□□□□ -1.49
TRAPPC11-207ENST00000511409 WWC3Q9ULE0 1092 aa5.74□□□□□ -1.49
TRAPPC11-207ENST00000511409 MMP20O60882 483 aa5.73□□□□□ -1.49
TRAPPC11-207ENST00000511409 POLR3DP05423 398 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC11-207ENST00000511409 PSAPP07602 524 aa5.73□□□□□ -1.49
TRAPPC11-207ENST00000511409 AMPD1P23109 780 aa5.73□□□□□ -1.49
TRAPPC11-207ENST00000511409 CHRNA4P43681 627 aa5.73□□□□□ -1.49
TRAPPC11-207ENST00000511409 FGD1P98174 961 aa5.73□□□□□ -1.49
TRAPPC11-207ENST00000511409 XPCQ01831 940 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC11-207ENST00000511409 ENOX2Q16206 610 aaKnown RBP5.73□□□□□ -1.49
TRAPPC11-207ENST00000511409 USPL1Q5W0Q7 1092 aa5.73□□□□□ -1.49
TRAPPC11-207ENST00000511409 ALG1LQ6GMV1 187 aa5.73□□□□□ -1.49
TRAPPC11-207ENST00000511409 KRTAP1-3Q8IUG1 177 aa5.73□□□□□ -1.49
TRAPPC11-207ENST00000511409 SETDB2Q96T68 719 aa5.73□□□□□ -1.49
TRAPPC11-207ENST00000511409 DNAJC25Q9H1X3 360 aa5.73□□□□□ -1.49
TRAPPC11-207ENST00000511409 ZFATQ9P243 1243 aa5.73□□□□□ -1.49
TRAPPC11-207ENST00000511409 KANSL3Q9P2N6 904 aa5.73□□□□□ -1.49
TRAPPC11-207ENST00000511409 EREGO14944 169 aa5.72□□□□□ -1.49
TRAPPC11-207ENST00000511409 PRPF40AO75400 957 aaKnown RBP5.72□□□□□ -1.49
TRAPPC11-207ENST00000511409 ADH7P40394 386 aa5.72□□□□□ -1.49
TRAPPC11-207ENST00000511409 PCSK7Q16549 785 aa5.72□□□□□ -1.49
TRAPPC11-207ENST00000511409 C20orf204Q6ZNR8 217 aa5.72□□□□□ -1.49
TRAPPC11-207ENST00000511409 PMEPA1Q969W9 287 aa5.72□□□□□ -1.49
TRAPPC11-207ENST00000511409 DUSP9Q99956 384 aaKnown RBP5.72□□□□□ -1.49
TRAPPC11-207ENST00000511409 ZFYVE28Q9HCC9 887 aa5.72□□□□□ -1.49
TRAPPC11-207ENST00000511409 STARD13Q9Y3M8 1113 aa5.72□□□□□ -1.49
TRAPPC11-207ENST00000511409 E9PSI1 815 aa5.71□□□□□ -1.5
TRAPPC11-207ENST00000511409 CYP2E1P05181 493 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC11-207ENST00000511409 HOXD8P13378 290 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC11-207ENST00000511409 COL9A3Q14050 684 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC11-207ENST00000511409 DHX32Q7L7V1 743 aaKnown RBP5.71□□□□□ -1.5
TRAPPC11-207ENST00000511409 NCAPG2Q86XI2 1143 aa5.71□□□□□ -1.5
TRAPPC11-207ENST00000511409 CCDC74AQ96AQ1 378 aa5.71□□□□□ -1.5
TRAPPC11-207ENST00000511409 MRRFQ96E11 262 aaKnown RBP5.71□□□□□ -1.5
TRAPPC11-207ENST00000511409 UBE2OQ9C0C9 1292 aaKnown RBP5.71□□□□□ -1.5
TRAPPC11-207ENST00000511409 CHRDQ9H2X0 955 aa5.71□□□□□ -1.5
TRAPPC11-207ENST00000511409 MRS2Q9HD23 443 aa5.71□□□□□ -1.5
TRAPPC11-207ENST00000511409 NLRP2Q9NX02 1062 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms