RNA–Protein interactions for RNA: ENST00000509977.1

RETREG1-205, Transcript of reticulophagy regulator 1, humanhuman

TSL 5

Gene RETREG1, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-205ENST00000509977 IFT57Q9NWB7 429 aa9.32□□□□□ -0.92
RETREG1-205ENST00000509977 PCDHGA10Q9Y5H3 936 aa9.32□□□□□ -0.92
RETREG1-205ENST00000509977 ADAMTSL1Q8N6G6 1762 aa9.32□□□□□ -0.92
RETREG1-205ENST00000509977 SCN4AP35499 1836 aa9.31□□□□□ -0.92
RETREG1-205ENST00000509977 ANXA1P04083 346 aa9.31□□□□□ -0.92
RETREG1-205ENST00000509977 CCDC27Q2M243 656 aa9.31□□□□□ -0.92
RETREG1-205ENST00000509977 ERFEQ4G0M1 354 aa9.31□□□□□ -0.92
RETREG1-205ENST00000509977 CCDC93Q567U6 631 aa9.31□□□□□ -0.92
RETREG1-205ENST00000509977 COPS6Q7L5N1 327 aa9.31□□□□□ -0.92
RETREG1-205ENST00000509977 NUTM1Q86Y26 1132 aa9.31□□□□□ -0.92
RETREG1-205ENST00000509977 NGEFQ8N5V2 710 aa9.31□□□□□ -0.92
RETREG1-205ENST00000509977 COL4A5P29400 1685 aa9.31□□□□□ -0.92
RETREG1-205ENST00000509977 NPHP1O15259 732 aa9.3□□□□□ -0.92
RETREG1-205ENST00000509977 EIF2S2P20042 333 aaKnown RBP9.3□□□□□ -0.92
RETREG1-205ENST00000509977 ALDH1B1P30837 517 aa9.3□□□□□ -0.92
RETREG1-205ENST00000509977 FKBP4Q02790 459 aaKnown RBP eCLIP9.3□□□□□ -0.92
RETREG1-205ENST00000509977 FSTL1Q12841 308 aa9.3□□□□□ -0.92
RETREG1-205ENST00000509977 TCIRG1Q13488 830 aa9.3□□□□□ -0.92
RETREG1-205ENST00000509977 ADGRD1Q6QNK2 874 aa9.3□□□□□ -0.92
RETREG1-205ENST00000509977 XAGE3Q8WTP9 111 aa9.3□□□□□ -0.92
RETREG1-205ENST00000509977 CRAMP1Q96RY5 1269 aa9.3□□□□□ -0.92
RETREG1-205ENST00000509977 ADAM33Q9BZ11 813 aa9.3□□□□□ -0.92
RETREG1-205ENST00000509977 CHPF2Q9P2E5 772 aa9.3□□□□□ -0.92
RETREG1-205ENST00000509977 DBF4Q9UBU7 674 aaPredicted RBP9.3□□□□□ -0.92
RETREG1-205ENST00000509977 LTBP1Q14766 1721 aa9.29□□□□□ -0.92
RETREG1-205ENST00000509977 PTPREP23469 700 aa9.29□□□□□ -0.92
RETREG1-205ENST00000509977 GPTP24298 496 aa9.29□□□□□ -0.92
RETREG1-205ENST00000509977 GNAI1P63096 354 aa9.29□□□□□ -0.92
RETREG1-205ENST00000509977 CALD1Q05682 793 aaKnown RBP9.29□□□□□ -0.92
RETREG1-205ENST00000509977 HSP90AB3PQ58FF7 597 aa9.29□□□□□ -0.92
RETREG1-205ENST00000509977 HDGFL1Q5TGJ6 251 aa9.29□□□□□ -0.92
RETREG1-205ENST00000509977 DUSP27Q5VZP5 1158 aa9.29□□□□□ -0.92
RETREG1-205ENST00000509977 PPP1R42Q7Z4L9 355 aa9.29□□□□□ -0.92
RETREG1-205ENST00000509977 NLRP10Q86W26 655 aa9.29□□□□□ -0.92
RETREG1-205ENST00000509977 RTKN2Q8IZC4 609 aa9.29□□□□□ -0.92
RETREG1-205ENST00000509977 PLBD2Q8NHP8 589 aa9.29□□□□□ -0.92
RETREG1-205ENST00000509977 DDX12PQ92771 950 aa9.29□□□□□ -0.92
RETREG1-205ENST00000509977 PSMD1Q99460 953 aa9.29□□□□□ -0.92
RETREG1-205ENST00000509977 ISCA1Q9BUE6 129 aa9.29□□□□□ -0.92
RETREG1-205ENST00000509977 RRAGCQ9HB90 399 aa9.29□□□□□ -0.92
RETREG1-205ENST00000509977 ARIH1Q9Y4X5 557 aaPredicted RBP9.29□□□□□ -0.92
RETREG1-205ENST00000509977 SPDYE16A6NNV3 312 aaPredicted RBP9.28□□□□□ -0.92
RETREG1-205ENST00000509977 FAM177BA6PVY3 158 aa9.28□□□□□ -0.92
RETREG1-205ENST00000509977 TK2O00142 265 aa9.28□□□□□ -0.92
RETREG1-205ENST00000509977 VEGFAP15692 232 aaPredicted RBP9.28□□□□□ -0.92
RETREG1-205ENST00000509977 TRIM28Q13263 835 aaKnown RBP9.28□□□□□ -0.92
RETREG1-205ENST00000509977 GRIPAP1Q4V328 841 aa9.28□□□□□ -0.92
RETREG1-205ENST00000509977 CC2D2BQ6DHV5 1058 aa9.28□□□□□ -0.92
RETREG1-205ENST00000509977 TYW1BQ6NUM6 668 aa9.28□□□□□ -0.92
RETREG1-205ENST00000509977 OLFM4Q6UX06 510 aa9.28□□□□□ -0.92
RETREG1-205ENST00000509977 DNAJC5GQ8N7S2 189 aa9.28□□□□□ -0.92
RETREG1-205ENST00000509977 UTP14AQ9BVJ6 771 aaKnown RBP9.28□□□□□ -0.92
RETREG1-205ENST00000509977 COL4A1P02462 1669 aa9.28□□□□□ -0.92
RETREG1-205ENST00000509977 DUOX1Q9NRD9 1551 aa9.28□□□□□ -0.92
RETREG1-205ENST00000509977 TAF1P21675 1872 aa9.28□□□□□ -0.92
RETREG1-205ENST00000509977 FZD9O00144 591 aa9.27□□□□□ -0.93
RETREG1-205ENST00000509977 GTF2E1P29083 439 aaPredicted RBP9.27□□□□□ -0.93
RETREG1-205ENST00000509977 APLP1P51693 650 aa9.27□□□□□ -0.93
RETREG1-205ENST00000509977 NECTIN2Q92692 538 aa9.27□□□□□ -0.93
RETREG1-205ENST00000509977 FBXW7Q969H0 707 aa9.27□□□□□ -0.93
RETREG1-205ENST00000509977 RNF166Q96A37 237 aaPredicted RBP9.27□□□□□ -0.93
RETREG1-205ENST00000509977 HYPKQ9NX55 129 aa9.27□□□□□ -0.93
RETREG1-205ENST00000509977 LAS1LQ9Y4W2 734 aaKnown RBP9.27□□□□□ -0.93
RETREG1-205ENST00000509977 IL16Q14005 1332 aa9.27□□□□□ -0.93
RETREG1-205ENST00000509977 CACNA1FO60840 1977 aa9.26□□□□□ -0.93
RETREG1-205ENST00000509977 SLC51AQ86UW1 340 aa9.26□□□□□ -0.93
RETREG1-205ENST00000509977 WWC1Q8IX03 1113 aa9.26□□□□□ -0.93
RETREG1-205ENST00000509977 C8orf58Q8NAV2 365 aa9.26□□□□□ -0.93
RETREG1-205ENST00000509977 SMC1BQ8NDV3 1235 aa9.26□□□□□ -0.93
RETREG1-205ENST00000509977 RBM17Q96I25 401 aaKnown RBP9.26□□□□□ -0.93
RETREG1-205ENST00000509977 NLRP3Q96P20 1036 aa9.26□□□□□ -0.93
RETREG1-205ENST00000509977 EPAS1Q99814 870 aa9.26□□□□□ -0.93
RETREG1-205ENST00000509977 RTFDC1Q9BY42 306 aaPredicted RBP9.26□□□□□ -0.93
RETREG1-205ENST00000509977 ABCC4O15439 1325 aa9.26□□□□□ -0.93
RETREG1-205ENST00000509977 SH3TC1Q8TE82 1336 aa9.26□□□□□ -0.93
RETREG1-205ENST00000509977 PPEF1O14829 653 aaPredicted RBP9.25□□□□□ -0.93
RETREG1-205ENST00000509977 DDNO94850 711 aaPredicted RBP9.25□□□□□ -0.93
RETREG1-205ENST00000509977 IARSP41252 1262 aaKnown RBP9.25□□□□□ -0.93
RETREG1-205ENST00000509977 AIMP1Q12904 312 aaKnown RBP9.25□□□□□ -0.93
RETREG1-205ENST00000509977 SYNE4Q8N205 404 aa9.25□□□□□ -0.93
RETREG1-205ENST00000509977 TSPYL6Q8N831 410 aa9.25□□□□□ -0.93
RETREG1-205ENST00000509977 RPGRQ92834 1020 aaKnown RBP9.25□□□□□ -0.93
RETREG1-205ENST00000509977 VPS33BQ9H267 617 aa9.25□□□□□ -0.93
RETREG1-205ENST00000509977 ZNF277Q9NRM2 450 aaPredicted RBP9.25□□□□□ -0.93
RETREG1-205ENST00000509977 ATP6V0A2Q9Y487 856 aa9.25□□□□□ -0.93
RETREG1-205ENST00000509977 ZNF541Q9H0D2 1346 aa9.25□□□□□ -0.93
RETREG1-205ENST00000509977 SF3B3Q15393 1217 aaKnown RBP9.24□□□□□ -0.93
RETREG1-205ENST00000509977 C16orf71Q8IYS4 520 aaPredicted RBP9.24□□□□□ -0.93
RETREG1-205ENST00000509977 PHAXQ9H814 394 aaKnown RBP9.24□□□□□ -0.93
RETREG1-205ENST00000509977 HRO43593 1189 aa9.23□□□□□ -0.93
RETREG1-205ENST00000509977 BBOX1O75936 387 aa9.23□□□□□ -0.93
RETREG1-205ENST00000509977 HCLS1P14317 486 aaPredicted RBP9.23□□□□□ -0.93
RETREG1-205ENST00000509977 NBR1Q14596 966 aa9.23□□□□□ -0.93
RETREG1-205ENST00000509977 SP8Q8IXZ3 490 aa9.23□□□□□ -0.93
RETREG1-205ENST00000509977 KCNV2Q8TDN2 545 aa9.23□□□□□ -0.93
RETREG1-205ENST00000509977 CHMP4AQ9BY43 222 aa9.23□□□□□ -0.93
RETREG1-205ENST00000509977 MRS2Q9HD23 443 aa9.23□□□□□ -0.93
RETREG1-205ENST00000509977 TRMT112Q9UI30 125 aaKnown RBP9.23□□□□□ -0.93
RETREG1-205ENST00000509977 VPS9D1Q9Y2B5 631 aa9.23□□□□□ -0.93
RETREG1-205ENST00000509977 MYH3P11055 1940 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms