RNA–Protein interactions for RNA: ENST00000509078.1

SMUG1-216, Transcript of single-strand-selective monofunctional uracil-DNA glycosylase 1, human

TSL 4

Gene SMUG1, Length 598 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMUG1-216	ENST00000509078	SPEF2	Q9C093	1822 aa		13.71	□□□□□ -0.22
SMUG1-216	ENST00000509078	HMMR	O75330	724 aa		13.7	□□□□□ -0.22
SMUG1-216	ENST00000509078	RFX5	P48382	616 aa	Predicted RBP	13.7	□□□□□ -0.22
SMUG1-216	ENST00000509078	ST5	P78524	1137 aa		13.7	□□□□□ -0.22
SMUG1-216	ENST00000509078	ZNF594	Q96JF6	807 aa	Predicted RBP	13.7	□□□□□ -0.22
SMUG1-216	ENST00000509078	COL4A1	P02462	1669 aa		13.69	□□□□□ -0.22
SMUG1-216	ENST00000509078	APBB1	O00213	710 aa		13.69	□□□□□ -0.22
SMUG1-216	ENST00000509078	CAPN15	O75808	1086 aa		13.69	□□□□□ -0.22
SMUG1-216	ENST00000509078	HSP90B1	P14625	803 aa	Known RBP	13.69	□□□□□ -0.22
SMUG1-216	ENST00000509078	NLRP3	Q96P20	1036 aa		13.69	□□□□□ -0.22
SMUG1-216	ENST00000509078	EXOC6B	Q9Y2D4	811 aa		13.69	□□□□□ -0.22
SMUG1-216	ENST00000509078	SURF6	O75683	361 aa	Known RBP	13.68	□□□□□ -0.22
SMUG1-216	ENST00000509078	ITGA6	P23229	1130 aa		13.68	□□□□□ -0.22
SMUG1-216	ENST00000509078	CCDC57	Q2TAC2	916 aa		13.68	□□□□□ -0.22
SMUG1-216	ENST00000509078	CCDC152	Q4G0S7	254 aa		13.68	□□□□□ -0.22
SMUG1-216	ENST00000509078	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.68	□□□□□ -0.22
SMUG1-216	ENST00000509078	SIL1	Q9H173	461 aa		13.68	□□□□□ -0.22
SMUG1-216	ENST00000509078	TAOK3	Q9H2K8	898 aa		13.68	□□□□□ -0.22
SMUG1-216	ENST00000509078	DCTPP1	Q9H773	170 aa		13.68	□□□□□ -0.22
SMUG1-216	ENST00000509078	SEC31B	Q9NQW1	1179 aa		13.68	□□□□□ -0.22
SMUG1-216	ENST00000509078	RIC1	Q4ADV7	1423 aa		13.67	□□□□□ -0.22
SMUG1-216	ENST00000509078	PTPN12	Q05209	780 aa	Known RBP	13.67	□□□□□ -0.22
SMUG1-216	ENST00000509078	IFIT5	Q13325	482 aa	Known RBP	13.67	□□□□□ -0.22
SMUG1-216	ENST00000509078	SF3B3	Q15393	1217 aa	Known RBP	13.67	□□□□□ -0.22
SMUG1-216	ENST00000509078	STYK1	Q6J9G0	422 aa		13.67	□□□□□ -0.22
SMUG1-216	ENST00000509078	JMY	Q8N9B5	988 aa		13.67	□□□□□ -0.22
SMUG1-216	ENST00000509078	MASTL	Q96GX5	879 aa		13.67	□□□□□ -0.22
SMUG1-216	ENST00000509078	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.67	□□□□□ -0.22
SMUG1-216	ENST00000509078	ZNF541	Q9H0D2	1346 aa		13.66	□□□□□ -0.22
SMUG1-216	ENST00000509078	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.66	□□□□□ -0.22
SMUG1-216	ENST00000509078	ANKRD18B	A2A2Z9	1011 aa		13.66	□□□□□ -0.22
SMUG1-216	ENST00000509078	TAF7L	Q5H9L4	462 aa		13.66	□□□□□ -0.22
SMUG1-216	ENST00000509078	DPY19L2	Q6NUT2	758 aa		13.66	□□□□□ -0.22
SMUG1-216	ENST00000509078	SMC5	Q8IY18	1101 aa		13.66	□□□□□ -0.22
SMUG1-216	ENST00000509078	C7orf43	Q8WVR3	580 aa		13.66	□□□□□ -0.22
SMUG1-216	ENST00000509078	CNKSR1	Q969H4	720 aa		13.66	□□□□□ -0.22
SMUG1-216	ENST00000509078	PUS3	Q9BZE2	481 aa	Known RBP	13.66	□□□□□ -0.22
SMUG1-216	ENST00000509078	BCL11A	Q9H165	835 aa		13.66	□□□□□ -0.22
SMUG1-216	ENST00000509078	COL4A5	P29400	1685 aa		13.66	□□□□□ -0.22
SMUG1-216	ENST00000509078	SMARCA5	O60264	1052 aa	Predicted RBP	13.65	□□□□□ -0.22
SMUG1-216	ENST00000509078	OS9	Q13438	667 aa	Predicted RBP	13.65	□□□□□ -0.22
SMUG1-216	ENST00000509078	SKAP1	Q86WV1	359 aa		13.65	□□□□□ -0.22
SMUG1-216	ENST00000509078	COPRS	Q9NQ92	184 aa		13.65	□□□□□ -0.22
SMUG1-216	ENST00000509078	RTL9	Q8NET4	1388 aa		13.65	□□□□□ -0.22
SMUG1-216	ENST00000509078	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
SMUG1-216	ENST00000509078	LRRC24	Q50LG9	513 aa		13.64	□□□□□ -0.23
SMUG1-216	ENST00000509078	ANKRD45	Q5TZF3	282 aa		13.64	□□□□□ -0.23
SMUG1-216	ENST00000509078	RPGR	Q92834	1020 aa	Known RBP	13.64	□□□□□ -0.23
SMUG1-216	ENST00000509078	GCC1	Q96CN9	775 aa		13.64	□□□□□ -0.23
SMUG1-216	ENST00000509078	MKRN1	Q9UHC7	482 aa	Known RBP	13.64	□□□□□ -0.23
SMUG1-216	ENST00000509078	PDZRN3	Q9UPQ7	1066 aa		13.64	□□□□□ -0.23
SMUG1-216	ENST00000509078	NOP58	Q9Y2X3	529 aa	Known RBP	13.64	□□□□□ -0.23
SMUG1-216	ENST00000509078	SCN4A	P35499	1836 aa		13.64	□□□□□ -0.23
SMUG1-216	ENST00000509078	LTBP3	Q9NS15	1303 aa		13.64	□□□□□ -0.23
SMUG1-216	ENST00000509078	KLRG2	A4D1S0	409 aa	Predicted RBP	13.63	□□□□□ -0.23
SMUG1-216	ENST00000509078	HSPA1A	P0DMV8	641 aa	Known RBP	13.63	□□□□□ -0.23
SMUG1-216	ENST00000509078	HSPA1B	P0DMV9	641 aa	Known RBP	13.63	□□□□□ -0.23
SMUG1-216	ENST00000509078	NPR1	P16066	1061 aa		13.63	□□□□□ -0.23
SMUG1-216	ENST00000509078	CRY2	Q49AN0	593 aa		13.63	□□□□□ -0.23
SMUG1-216	ENST00000509078	DDX46	Q7L014	1031 aa	Known RBP	13.63	□□□□□ -0.23
SMUG1-216	ENST00000509078	ATG9A	Q7Z3C6	839 aa		13.63	□□□□□ -0.23
SMUG1-216	ENST00000509078	CELF1	Q92879	486 aa	Known RBP	13.63	□□□□□ -0.23
SMUG1-216	ENST00000509078	EYA2	O00167	538 aa		13.62	□□□□□ -0.23
SMUG1-216	ENST00000509078	SASH1	O94885	1247 aa		13.62	□□□□□ -0.23
SMUG1-216	ENST00000509078	CCDC93	Q567U6	631 aa		13.62	□□□□□ -0.23
SMUG1-216	ENST00000509078	EAPP	Q56P03	285 aa	Predicted RBP	13.62	□□□□□ -0.23
SMUG1-216	ENST00000509078	LDHAL6A	Q6ZMR3	332 aa		13.62	□□□□□ -0.23
SMUG1-216	ENST00000509078	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.62	□□□□□ -0.23
SMUG1-216	ENST00000509078	LTBP1	Q14766	1721 aa		13.61	□□□□□ -0.23
SMUG1-216	ENST00000509078	RAB11FIP3	O75154	756 aa		13.61	□□□□□ -0.23
SMUG1-216	ENST00000509078	HOXA10	P31260	410 aa	Predicted RBP	13.61	□□□□□ -0.23
SMUG1-216	ENST00000509078	IGHMBP2	P38935	993 aa	Known RBP	13.61	□□□□□ -0.23
SMUG1-216	ENST00000509078	NUCB1	Q02818	461 aa		13.61	□□□□□ -0.23
SMUG1-216	ENST00000509078	TFCP2	Q12800	502 aa		13.61	□□□□□ -0.23
SMUG1-216	ENST00000509078	CHADL	Q6NUI6	762 aa		13.61	□□□□□ -0.23
SMUG1-216	ENST00000509078	ANKRD18A	Q8IVF6	992 aa		13.61	□□□□□ -0.23
SMUG1-216	ENST00000509078	RHPN1	Q8TCX5	695 aa		13.61	□□□□□ -0.23
SMUG1-216	ENST00000509078	RBM17	Q96I25	401 aa	Known RBP	13.61	□□□□□ -0.23
SMUG1-216	ENST00000509078	CDC5L	Q99459	802 aa	Known RBP	13.61	□□□□□ -0.23
SMUG1-216	ENST00000509078	LNPK	Q9C0E8	428 aa		13.61	□□□□□ -0.23
SMUG1-216	ENST00000509078	IL1RAPL2	Q9NP60	686 aa		13.61	□□□□□ -0.23
SMUG1-216	ENST00000509078	CNNM1	Q9NRU3	951 aa		13.61	□□□□□ -0.23
SMUG1-216	ENST00000509078		A0A1B0GUL6	1792 aa		13.6	□□□□□ -0.23
SMUG1-216	ENST00000509078	CIAO1	O76071	339 aa		13.6	□□□□□ -0.23
SMUG1-216	ENST00000509078	IL15	P40933	162 aa	Predicted RBP	13.6	□□□□□ -0.23
SMUG1-216	ENST00000509078	RPS8	P62241	208 aa	Known RBP	13.6	□□□□□ -0.23
SMUG1-216	ENST00000509078	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
SMUG1-216	ENST00000509078	GRAP	Q13588	217 aa		13.6	□□□□□ -0.23
SMUG1-216	ENST00000509078	HSP90AB4P	Q58FF6	505 aa		13.6	□□□□□ -0.23
SMUG1-216	ENST00000509078	CHD1L	Q86WJ1	897 aa		13.6	□□□□□ -0.23
SMUG1-216	ENST00000509078	HELB	Q8NG08	1087 aa	Predicted RBP	13.6	□□□□□ -0.23
SMUG1-216	ENST00000509078	GRAPL	Q8TC17	118 aa	Predicted RBP	13.6	□□□□□ -0.23
SMUG1-216	ENST00000509078	MPHOSPH8	Q99549	860 aa		13.6	□□□□□ -0.23
SMUG1-216	ENST00000509078	LRRCC1	Q9C099	1032 aa		13.6	□□□□□ -0.23
SMUG1-216	ENST00000509078	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.6	□□□□□ -0.23
SMUG1-216	ENST00000509078	RIPOR2	Q9Y4F9	1068 aa		13.6	□□□□□ -0.23
SMUG1-216	ENST00000509078	ADAMTSL1	Q8N6G6	1762 aa		13.6	□□□□□ -0.23
SMUG1-216	ENST00000509078	PDE4A	P27815	886 aa		13.59	□□□□□ -0.23
SMUG1-216	ENST00000509078	FMR1	Q06787	632 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
SMUG1-216	ENST00000509078	ERC1	Q8IUD2	1116 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms