RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 COL6A3P12111 3177 aa14.89□□□□□ -0.03
NEDD9-212ENST00000508800 C6orf229H3BNL8 230 aa14.89□□□□□ -0.03
NEDD9-212ENST00000508800 DLL1O00548 723 aa14.89□□□□□ -0.03
NEDD9-212ENST00000508800 PER1O15534 1290 aaPredicted RBP14.89□□□□□ -0.03
NEDD9-212ENST00000508800 NF2P35240 595 aa14.89□□□□□ -0.03
NEDD9-212ENST00000508800 TCIRG1Q13488 830 aa14.89□□□□□ -0.03
NEDD9-212ENST00000508800 SCARF1Q14162 830 aa14.89□□□□□ -0.03
NEDD9-212ENST00000508800 COLQQ9Y215 455 aaPredicted RBP14.89□□□□□ -0.03
NEDD9-212ENST00000508800 TRIM17Q9Y577 477 aa14.89□□□□□ -0.03
NEDD9-212ENST00000508800 SH3TC1Q8TE82 1336 aa14.89□□□□□ -0.03
NEDD9-212ENST00000508800 HCLS1P14317 486 aaPredicted RBP14.88□□□□□ -0.03
NEDD9-212ENST00000508800 INHBEP58166 350 aa14.88□□□□□ -0.03
NEDD9-212ENST00000508800 EIF4A1P60842 406 aaKnown RBP14.88□□□□□ -0.03
NEDD9-212ENST00000508800 DCTN1Q14203 1278 aa14.88□□□□□ -0.03
NEDD9-212ENST00000508800 ASTN2O75129 1339 aaPredicted RBP14.88□□□□□ -0.03
NEDD9-212ENST00000508800 CLSPNQ9HAW4 1339 aa14.88□□□□□ -0.03
NEDD9-212ENST00000508800 RIMBP2O15034 1052 aa14.87□□□□□ -0.03
NEDD9-212ENST00000508800 OTOP1Q7RTM1 612 aa14.87□□□□□ -0.03
NEDD9-212ENST00000508800 NLRP10Q86W26 655 aa14.87□□□□□ -0.03
NEDD9-212ENST00000508800 ARMC5Q96C12 935 aa14.87□□□□□ -0.03
NEDD9-212ENST00000508800 TRMT112Q9UI30 125 aaKnown RBP14.87□□□□□ -0.03
NEDD9-212ENST00000508800 LAMB1P07942 1786 aa14.87□□□□□ -0.03
NEDD9-212ENST00000508800 UBE2Q2LH0YL09 131 aa14.86□□□□□ -0.03
NEDD9-212ENST00000508800 TTLL12Q14166 644 aaPredicted RBP14.86□□□□□ -0.03
NEDD9-212ENST00000508800 RSBN1LQ6PCB5 846 aaPredicted RBP14.86□□□□□ -0.03
NEDD9-212ENST00000508800 ERO1AQ96HE7 468 aa14.86□□□□□ -0.03
NEDD9-212ENST00000508800 TMEM106CQ9BVX2 250 aa14.86□□□□□ -0.03
NEDD9-212ENST00000508800 ZC3H12CQ9C0D7 883 aaKnown RBP14.86□□□□□ -0.03
NEDD9-212ENST00000508800 MIS18AQ9NYP9 233 aa14.86□□□□□ -0.03
NEDD9-212ENST00000508800 POLLQ9UGP5 575 aa14.86□□□□□ -0.03
NEDD9-212ENST00000508800 DLG5Q8TDM6 1919 aa14.86□□□□□ -0.03
NEDD9-212ENST00000508800 G3V3G9 751 aa14.85□□□□□ -0.03
NEDD9-212ENST00000508800 U2AF1L5P0DN76 240 aaPredicted RBP14.85□□□□□ -0.03
NEDD9-212ENST00000508800 U2AF1Q01081 240 aaKnown RBP eCLIP14.85□□□□□ -0.03
NEDD9-212ENST00000508800 DOK7Q18PE1 504 aa14.85□□□□□ -0.03
NEDD9-212ENST00000508800 DCAF8Q5TAQ9 597 aa14.85□□□□□ -0.03
NEDD9-212ENST00000508800 MYOZ2Q9NPC6 264 aa14.85□□□□□ -0.03
NEDD9-212ENST00000508800 KCNQ5Q9NR82 932 aa14.85□□□□□ -0.03
NEDD9-212ENST00000508800 USP17L8P0C7I0 530 aa14.84□□□□□ -0.03
NEDD9-212ENST00000508800 MOB2Q70IA6 237 aa14.84□□□□□ -0.03
NEDD9-212ENST00000508800 ARMC9Q7Z3E5 817 aa14.84□□□□□ -0.03
NEDD9-212ENST00000508800 SLC17A8Q8NDX2 589 aa14.84□□□□□ -0.03
NEDD9-212ENST00000508800 TBC1D16Q8TBP0 767 aa14.84□□□□□ -0.03
NEDD9-212ENST00000508800 PTPN22Q9Y2R2 807 aa14.84□□□□□ -0.03
NEDD9-212ENST00000508800 MANSC4A6NHS7 340 aaPredicted RBP14.83□□□□□ -0.04
NEDD9-212ENST00000508800 NEFMP07197 916 aa14.83□□□□□ -0.04
NEDD9-212ENST00000508800 EN2P19622 333 aaPredicted RBP14.83□□□□□ -0.04
NEDD9-212ENST00000508800 GPSM2P81274 684 aa14.83□□□□□ -0.04
NEDD9-212ENST00000508800 SF3B3Q15393 1217 aaKnown RBP14.83□□□□□ -0.04
NEDD9-212ENST00000508800 LRP10Q7Z4F1 713 aa14.83□□□□□ -0.04
NEDD9-212ENST00000508800 R3HDMLQ9H3Y0 253 aa14.83□□□□□ -0.04
NEDD9-212ENST00000508800 PODXL2Q9NZ53 605 aa14.83□□□□□ -0.04
NEDD9-212ENST00000508800 MMP14P50281 582 aa14.82□□□□□ -0.04
NEDD9-212ENST00000508800 SPRYD7Q5W111 196 aa14.82□□□□□ -0.04
NEDD9-212ENST00000508800 GMLQ99445 158 aa14.82□□□□□ -0.04
NEDD9-212ENST00000508800 MKRN3Q13064 507 aaKnown RBP14.81□□□□□ -0.04
NEDD9-212ENST00000508800 PDIA6Q15084 440 aa14.81□□□□□ -0.04
NEDD9-212ENST00000508800 NBPF11Q86T75 865 aa14.81□□□□□ -0.04
NEDD9-212ENST00000508800 CELF1Q92879 486 aaKnown RBP14.81□□□□□ -0.04
NEDD9-212ENST00000508800 OTUD5Q96G74 571 aa14.81□□□□□ -0.04
NEDD9-212ENST00000508800 LAMA3Q16787 3333 aa14.81□□□□□ -0.04
NEDD9-212ENST00000508800 ZBTB48P10074 688 aaPredicted RBP14.8□□□□□ -0.04
NEDD9-212ENST00000508800 ARHGEF6Q15052 776 aa14.8□□□□□ -0.04
NEDD9-212ENST00000508800 OTUD7BQ6GQQ9 843 aa14.8□□□□□ -0.04
NEDD9-212ENST00000508800 IFNL1Q8IU54 200 aa14.8□□□□□ -0.04
NEDD9-212ENST00000508800 EFCC1Q9HA90 598 aa14.8□□□□□ -0.04
NEDD9-212ENST00000508800 UFL1O94874 794 aa14.79□□□□□ -0.04
NEDD9-212ENST00000508800 COL1A1P02452 1464 aaPredicted RBP14.79□□□□□ -0.04
NEDD9-212ENST00000508800 RPS8P62241 208 aaKnown RBP14.79□□□□□ -0.04
NEDD9-212ENST00000508800 PTPN12Q05209 780 aaKnown RBP14.79□□□□□ -0.04
NEDD9-212ENST00000508800 LDLRAD1Q5T700 205 aa14.79□□□□□ -0.04
NEDD9-212ENST00000508800 OGFOD1Q8N543 542 aa14.79□□□□□ -0.04
NEDD9-212ENST00000508800 ZNF333Q96JL9 665 aa14.79□□□□□ -0.04
NEDD9-212ENST00000508800 GGA1Q9UJY5 639 aa14.79□□□□□ -0.04
NEDD9-212ENST00000508800 MYO3BQ8WXR4 1341 aa14.78□□□□□ -0.04
NEDD9-212ENST00000508800 USP17L3A6NCW0 530 aa14.78□□□□□ -0.04
NEDD9-212ENST00000508800 USP17L4A6NCW7 530 aa14.78□□□□□ -0.04
NEDD9-212ENST00000508800 UNCXA6NJT0 531 aa14.78□□□□□ -0.04
NEDD9-212ENST00000508800 H0YGN5 161 aa14.78□□□□□ -0.04
NEDD9-212ENST00000508800 HSP90B1P14625 803 aaKnown RBP14.78□□□□□ -0.04
NEDD9-212ENST00000508800 USP17L1Q7RTZ2 530 aa14.78□□□□□ -0.04
NEDD9-212ENST00000508800 PODNQ7Z5L7 613 aa14.78□□□□□ -0.04
NEDD9-212ENST00000508800 APOBEC3FQ8IUX4 373 aaKnown RBP14.78□□□□□ -0.04
NEDD9-212ENST00000508800 THUMPD2Q9BTF0 503 aaKnown RBP14.78□□□□□ -0.04
NEDD9-212ENST00000508800 ANKIB1Q9P2G1 1089 aa14.78□□□□□ -0.04
NEDD9-212ENST00000508800 MNX1P50219 401 aaPredicted RBP14.77□□□□□ -0.05
NEDD9-212ENST00000508800 EIF2S2P20042 333 aaKnown RBP14.76□□□□□ -0.05
NEDD9-212ENST00000508800 SP3Q02447 781 aa14.76□□□□□ -0.05
NEDD9-212ENST00000508800 NBPF9Q3BBW0 867 aa14.76□□□□□ -0.05
NEDD9-212ENST00000508800 SLC9C1Q4G0N8 1177 aa14.76□□□□□ -0.05
NEDD9-212ENST00000508800 PRAMEF18Q5VWM3 479 aa14.76□□□□□ -0.05
NEDD9-212ENST00000508800 CHRDL2Q6WN34 429 aa14.76□□□□□ -0.05
NEDD9-212ENST00000508800 COPS6Q7L5N1 327 aa14.76□□□□□ -0.05
NEDD9-212ENST00000508800 CD99L2Q8TCZ2 262 aa14.76□□□□□ -0.05
NEDD9-212ENST00000508800 SLC10A4Q96EP9 437 aa14.76□□□□□ -0.05
NEDD9-212ENST00000508800 WNT10BO00744 389 aa14.75□□□□□ -0.05
NEDD9-212ENST00000508800 MAP3K11Q16584 847 aa14.75□□□□□ -0.05
NEDD9-212ENST00000508800 PROSER3Q2NL68 480 aa14.75□□□□□ -0.05
NEDD9-212ENST00000508800 SLC4A8Q2Y0W8 1093 aa14.75□□□□□ -0.05
NEDD9-212ENST00000508800 XAGE3Q8WTP9 111 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms