RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 XKR5Q6UX68 686 aa9.65□□□□□ -0.86
DHFR-204ENST00000508282 ZNF438Q7Z4V0 828 aa9.65□□□□□ -0.86
DHFR-204ENST00000508282 GLYCTKQ8IVS8 523 aa9.65□□□□□ -0.86
DHFR-204ENST00000508282 CYP2E1P05181 493 aaPredicted RBP9.64□□□□□ -0.87
DHFR-204ENST00000508282 EIF2AK2P19525 551 aaKnown RBP9.64□□□□□ -0.87
DHFR-204ENST00000508282 GRIK5Q16478 980 aa9.64□□□□□ -0.87
DHFR-204ENST00000508282 ELMSAN1Q6PJG2 1045 aa9.64□□□□□ -0.87
DHFR-204ENST00000508282 KCTD17Q8N5Z5 321 aa9.64□□□□□ -0.87
DHFR-204ENST00000508282 CCER1Q8TC90 406 aaPredicted RBP9.64□□□□□ -0.87
DHFR-204ENST00000508282 KRBA1A5PL33 1030 aa9.63□□□□□ -0.87
DHFR-204ENST00000508282 ARHGAP4P98171 946 aa9.63□□□□□ -0.87
DHFR-204ENST00000508282 ALYREFQ86V81 257 aaKnown RBP9.63□□□□□ -0.87
DHFR-204ENST00000508282 SMG9Q9H0W8 520 aaKnown RBP9.63□□□□□ -0.87
DHFR-204ENST00000508282 CNTN3Q9P232 1028 aa9.63□□□□□ -0.87
DHFR-204ENST00000508282 ITGB2P05107 769 aa9.62□□□□□ -0.87
DHFR-204ENST00000508282 GJD3Q8N144 294 aa9.62□□□□□ -0.87
DHFR-204ENST00000508282 TTC16Q8NEE8 873 aa9.62□□□□□ -0.87
DHFR-204ENST00000508282 TTC9Q92623 222 aa9.62□□□□□ -0.87
DHFR-204ENST00000508282 GNEQ9Y223 722 aaKnown RBP9.62□□□□□ -0.87
DHFR-204ENST00000508282 USP5P45974 858 aa9.61□□□□□ -0.87
DHFR-204ENST00000508282 ILDR2Q71H61 639 aa9.61□□□□□ -0.87
DHFR-204ENST00000508282 C1orf127Q8N9H9 656 aa9.61□□□□□ -0.87
DHFR-204ENST00000508282 PLD4Q96BZ4 506 aa9.61□□□□□ -0.87
DHFR-204ENST00000508282 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.61□□□□□ -0.87
DHFR-204ENST00000508282 GHRHP01286 108 aa9.6□□□□□ -0.87
DHFR-204ENST00000508282 HYAL2Q12891 473 aa9.6□□□□□ -0.87
DHFR-204ENST00000508282 PLA2G4EQ3MJ16 856 aa9.6□□□□□ -0.87
DHFR-204ENST00000508282 CHRDQ9H2X0 955 aa9.6□□□□□ -0.87
DHFR-204ENST00000508282 SOWAHDA6NJG2 315 aa9.59□□□□□ -0.87
DHFR-204ENST00000508282 SPDYE3A6NKU9 549 aa9.59□□□□□ -0.87
DHFR-204ENST00000508282 FAM229AH3BQW9 127 aa9.59□□□□□ -0.87
DHFR-204ENST00000508282 KIF4AO95239 1232 aa9.59□□□□□ -0.87
DHFR-204ENST00000508282 TRAIPQ9BWF2 469 aa9.59□□□□□ -0.87
DHFR-204ENST00000508282 KANSL3Q9P2N6 904 aa9.59□□□□□ -0.87
DHFR-204ENST00000508282 TNFRSF21O75509 655 aa9.58□□□□□ -0.88
DHFR-204ENST00000508282 EHHADHQ08426 723 aa9.58□□□□□ -0.88
DHFR-204ENST00000508282 TRAPPC3LQ5T215 181 aa9.58□□□□□ -0.88
DHFR-204ENST00000508282 MSL1Q68DK7 614 aa9.58□□□□□ -0.88
DHFR-204ENST00000508282 BRPF3Q9ULD4 1205 aa9.58□□□□□ -0.88
DHFR-204ENST00000508282 SPATA31C1P0DKV0 1188 aa9.57□□□□□ -0.88
DHFR-204ENST00000508282 CES1P23141 567 aa9.57□□□□□ -0.88
DHFR-204ENST00000508282 ATP11AP98196 1134 aa9.57□□□□□ -0.88
DHFR-204ENST00000508282 DMRTC2Q8IXT2 367 aaPredicted RBP9.57□□□□□ -0.88
DHFR-204ENST00000508282 RBSNQ9H1K0 784 aa9.57□□□□□ -0.88
DHFR-204ENST00000508282 SALL4Q9UJQ4 1053 aa9.57□□□□□ -0.88
DHFR-204ENST00000508282 A0A0A0MRY4 1105 aa9.56□□□□□ -0.88
DHFR-204ENST00000508282 BAG6P46379 1132 aa9.56□□□□□ -0.88
DHFR-204ENST00000508282 TRIM28Q13263 835 aaKnown RBP9.56□□□□□ -0.88
DHFR-204ENST00000508282 PRRT3Q5FWE3 981 aa9.56□□□□□ -0.88
DHFR-204ENST00000508282 GPAT2Q6NUI2 795 aa9.56□□□□□ -0.88
DHFR-204ENST00000508282 NCAPG2Q86XI2 1143 aa9.56□□□□□ -0.88
DHFR-204ENST00000508282 CEP120Q8N960 986 aa9.56□□□□□ -0.88
DHFR-204ENST00000508282 SPACA7Q96KW9 195 aa9.56□□□□□ -0.88
DHFR-204ENST00000508282 FOXD3Q9UJU5 478 aaPredicted RBP9.56□□□□□ -0.88
DHFR-204ENST00000508282 TRIM33Q9UPN9 1127 aa9.56□□□□□ -0.88
DHFR-204ENST00000508282 WFDC8Q8IUA0 241 aa9.55□□□□□ -0.88
DHFR-204ENST00000508282 SNX29Q8TEQ0 813 aa9.55□□□□□ -0.88
DHFR-204ENST00000508282 RASSF4Q9H2L5 321 aa9.55□□□□□ -0.88
DHFR-204ENST00000508282 EREGO14944 169 aa9.54□□□□□ -0.88
DHFR-204ENST00000508282 NDUFB5O43674 189 aa9.54□□□□□ -0.88
DHFR-204ENST00000508282 ACPPP15309 386 aa9.54□□□□□ -0.88
DHFR-204ENST00000508282 CHRNA4P43681 627 aa9.54□□□□□ -0.88
DHFR-204ENST00000508282 GDF6Q6KF10 455 aaPredicted RBP9.54□□□□□ -0.88
DHFR-204ENST00000508282 CD163Q86VB7 1156 aa9.54□□□□□ -0.88
DHFR-204ENST00000508282 IVNS1ABPQ9Y6Y0 642 aa9.54□□□□□ -0.88
DHFR-204ENST00000508282 C1QTNF9BB2RNN3 333 aa9.53□□□□□ -0.88
DHFR-204ENST00000508282 PHACTR2O75167 634 aa9.53□□□□□ -0.88
DHFR-204ENST00000508282 KCNA1Q09470 495 aa9.53□□□□□ -0.88
DHFR-204ENST00000508282 ADAMTSL4Q6UY14 1074 aa9.53□□□□□ -0.88
DHFR-204ENST00000508282 PMEPA1Q969W9 287 aa9.53□□□□□ -0.88
DHFR-204ENST00000508282 PBX4Q9BYU1 374 aa9.53□□□□□ -0.88
DHFR-204ENST00000508282 GRIK4Q16099 956 aa9.52□□□□□ -0.89
DHFR-204ENST00000508282 CEP135Q66GS9 1140 aa9.52□□□□□ -0.89
DHFR-204ENST00000508282 FMR1NBQ8N0W7 255 aaPredicted RBP9.52□□□□□ -0.89
DHFR-204ENST00000508282 FAM129BQ96TA1 746 aa9.52□□□□□ -0.89
DHFR-204ENST00000508282 IGHA2P01877 340 aa9.51□□□□□ -0.89
DHFR-204ENST00000508282 RAC1P63000 192 aa9.51□□□□□ -0.89
DHFR-204ENST00000508282 IL22RA1Q8N6P7 574 aa9.51□□□□□ -0.89
DHFR-204ENST00000508282 SPOCK3Q9BQ16 436 aa9.51□□□□□ -0.89
DHFR-204ENST00000508282 ZFYVE28Q9HCC9 887 aa9.51□□□□□ -0.89
DHFR-204ENST00000508282 BIN2Q9UBW5 565 aaPredicted RBP9.51□□□□□ -0.89
DHFR-204ENST00000508282 NFKBIEO00221 500 aa9.5□□□□□ -0.89
DHFR-204ENST00000508282 SMNDC1O75940 238 aaKnown RBP eCLIP9.5□□□□□ -0.89
DHFR-204ENST00000508282 IGHA1P01876 353 aa9.5□□□□□ -0.89
DHFR-204ENST00000508282 PROCP04070 461 aa9.5□□□□□ -0.89
DHFR-204ENST00000508282 ELNP15502 786 aa9.5□□□□□ -0.89
DHFR-204ENST00000508282 DTWD1Q8N5C7 304 aa9.5□□□□□ -0.89
DHFR-204ENST00000508282 CITED4Q96RK1 184 aa9.5□□□□□ -0.89
DHFR-204ENST00000508282 LACRTQ9GZZ8 138 aa9.5□□□□□ -0.89
DHFR-204ENST00000508282 DZANK1Q9NVP4 752 aa9.5□□□□□ -0.89
DHFR-204ENST00000508282 DEAF1O75398 565 aaPredicted RBP9.49□□□□□ -0.89
DHFR-204ENST00000508282 TRPA1O75762 1119 aa9.49□□□□□ -0.89
DHFR-204ENST00000508282 PDE3BQ13370 1112 aa9.49□□□□□ -0.89
DHFR-204ENST00000508282 HHIPQ96QV1 700 aa9.49□□□□□ -0.89
DHFR-204ENST00000508282 POP1Q99575 1024 aaKnown RBP9.49□□□□□ -0.89
DHFR-204ENST00000508282 AMOTL2Q9Y2J4 779 aa9.49□□□□□ -0.89
DHFR-204ENST00000508282 MSTNO14793 375 aa9.48□□□□□ -0.89
DHFR-204ENST00000508282 GPR182O15218 404 aa9.48□□□□□ -0.89
DHFR-204ENST00000508282 APBA3O96018 575 aa9.48□□□□□ -0.89
DHFR-204ENST00000508282 POLR3DP05423 398 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms