RNA–Protein interactions for RNA: ENST00000507594.1

SMAD1-207, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-207ENST00000507594 LRP5O75197 1615 aa11.23□□□□□ -0.61
SMAD1-207ENST00000507594 APBB1O00213 710 aa11.22□□□□□ -0.61
SMAD1-207ENST00000507594 PPEF1O14829 653 aaPredicted RBP11.22□□□□□ -0.61
SMAD1-207ENST00000507594 ALDH1B1P30837 517 aa11.22□□□□□ -0.61
SMAD1-207ENST00000507594 TGFB2P61812 414 aa11.22□□□□□ -0.61
SMAD1-207ENST00000507594 GRAPQ13588 217 aa11.22□□□□□ -0.61
SMAD1-207ENST00000507594 SF3B3Q15393 1217 aaKnown RBP11.22□□□□□ -0.61
SMAD1-207ENST00000507594 RPAP2Q8IXW5 612 aaPredicted RBP11.22□□□□□ -0.61
SMAD1-207ENST00000507594 GRAPLQ8TC17 118 aaPredicted RBP11.22□□□□□ -0.61
SMAD1-207ENST00000507594 CNKSR1Q969H4 720 aa11.22□□□□□ -0.61
SMAD1-207ENST00000507594 ZNF594Q96JF6 807 aaPredicted RBP11.22□□□□□ -0.61
SMAD1-207ENST00000507594 KIF13BQ9NQT8 1826 aa11.22□□□□□ -0.61
SMAD1-207ENST00000507594 SEC31BQ9NQW1 1179 aa11.22□□□□□ -0.61
SMAD1-207ENST00000507594 TAF1P21675 1872 aa11.21□□□□□ -0.61
SMAD1-207ENST00000507594 PNMA6EA0A0J9YXQ4 647 aa11.21□□□□□ -0.61
SMAD1-207ENST00000507594 SRGNP10124 158 aa11.21□□□□□ -0.61
SMAD1-207ENST00000507594 ATP8B2P98198 1209 aa11.21□□□□□ -0.61
SMAD1-207ENST00000507594 G3BP1Q13283 466 aaKnown RBP eCLIP11.21□□□□□ -0.61
SMAD1-207ENST00000507594 RABL6Q3YEC7 729 aaPredicted RBP11.21□□□□□ -0.61
SMAD1-207ENST00000507594 STYK1Q6J9G0 422 aa11.21□□□□□ -0.61
SMAD1-207ENST00000507594 NLGN2Q8NFZ4 835 aa11.21□□□□□ -0.61
SMAD1-207ENST00000507594 KLHDC4Q8TBB5 520 aa11.21□□□□□ -0.61
SMAD1-207ENST00000507594 KAZALD1Q96I82 304 aa11.21□□□□□ -0.61
SMAD1-207ENST00000507594 CCDC136Q96JN2 1154 aa11.21□□□□□ -0.61
SMAD1-207ENST00000507594 RWDD1Q9H446 243 aaPredicted RBP11.21□□□□□ -0.61
SMAD1-207ENST00000507594 PIM2Q9P1W9 311 aa11.21□□□□□ -0.61
SMAD1-207ENST00000507594 CLEC11AQ9Y240 323 aa11.21□□□□□ -0.61
SMAD1-207ENST00000507594 DLEC1Q9Y238 1755 aa11.21□□□□□ -0.62
SMAD1-207ENST00000507594 SURF6O75683 361 aaKnown RBP11.2□□□□□ -0.62
SMAD1-207ENST00000507594 CSF1RP07333 972 aa11.2□□□□□ -0.62
SMAD1-207ENST00000507594 KCNJ4P48050 445 aa11.2□□□□□ -0.62
SMAD1-207ENST00000507594 CRY2Q49AN0 593 aa11.2□□□□□ -0.62
SMAD1-207ENST00000507594 DALRD3Q5D0E6 543 aaKnown RBP11.2□□□□□ -0.62
SMAD1-207ENST00000507594 LDHAL6AQ6ZMR3 332 aa11.2□□□□□ -0.62
SMAD1-207ENST00000507594 TTLL6Q8N841 843 aa11.2□□□□□ -0.62
SMAD1-207ENST00000507594 CELF1Q92879 486 aaKnown RBP11.2□□□□□ -0.62
SMAD1-207ENST00000507594 PA2G4Q9UQ80 394 aaKnown RBP11.2□□□□□ -0.62
SMAD1-207ENST00000507594 BCS1LQ9Y276 419 aa11.2□□□□□ -0.62
SMAD1-207ENST00000507594 RTL9Q8NET4 1388 aa11.19□□□□□ -0.62
SMAD1-207ENST00000507594 RPS8P62241 208 aaKnown RBP11.19□□□□□ -0.62
SMAD1-207ENST00000507594 METTL24Q5JXM2 366 aa11.19□□□□□ -0.62
SMAD1-207ENST00000507594 PRPF40BQ6NWY9 871 aaKnown RBP11.19□□□□□ -0.62
SMAD1-207ENST00000507594 CRAMP1Q96RY5 1269 aa11.19□□□□□ -0.62
SMAD1-207ENST00000507594 EXOC6BQ9Y2D4 811 aa11.19□□□□□ -0.62
SMAD1-207ENST00000507594 PCDHB15Q9Y5E8 787 aa11.19□□□□□ -0.62
SMAD1-207ENST00000507594 HOXA10P31260 410 aaPredicted RBP11.18□□□□□ -0.62
SMAD1-207ENST00000507594 MTX1Q13505 466 aa11.18□□□□□ -0.62
SMAD1-207ENST00000507594 HSP90AB4PQ58FF6 505 aa11.18□□□□□ -0.62
SMAD1-207ENST00000507594 REM2Q8IYK8 340 aaPredicted RBP11.18□□□□□ -0.62
SMAD1-207ENST00000507594 SYT17Q9BSW7 474 aa11.18□□□□□ -0.62
SMAD1-207ENST00000507594 ANKIB1Q9P2G1 1089 aa11.18□□□□□ -0.62
SMAD1-207ENST00000507594 KLRG2A4D1S0 409 aaPredicted RBP11.17□□□□□ -0.62
SMAD1-207ENST00000507594 EYA2O00167 538 aa11.17□□□□□ -0.62
SMAD1-207ENST00000507594 C21orf2O43822 256 aa11.17□□□□□ -0.62
SMAD1-207ENST00000507594 BBOX1O75936 387 aa11.17□□□□□ -0.62
SMAD1-207ENST00000507594 TMC4Q7Z404 712 aa11.17□□□□□ -0.62
SMAD1-207ENST00000507594 ERC1Q8IUD2 1116 aa11.17□□□□□ -0.62
SMAD1-207ENST00000507594 SSH3Q8TE77 659 aa11.17□□□□□ -0.62
SMAD1-207ENST00000507594 KIAA1551Q9HCM1 1747 aa11.17□□□□□ -0.62
SMAD1-207ENST00000507594 SLX4Q8IY92 1834 aa11.16□□□□□ -0.62
SMAD1-207ENST00000507594 IL15P40933 162 aaPredicted RBP11.16□□□□□ -0.62
SMAD1-207ENST00000507594 PTPN12Q05209 780 aaKnown RBP11.16□□□□□ -0.62
SMAD1-207ENST00000507594 GPR162Q16538 588 aa11.16□□□□□ -0.62
SMAD1-207ENST00000507594 LRRC24Q50LG9 513 aa11.16□□□□□ -0.62
SMAD1-207ENST00000507594 CCDC93Q567U6 631 aa11.16□□□□□ -0.62
SMAD1-207ENST00000507594 SOGA3Q5TF21 947 aa11.16□□□□□ -0.62
SMAD1-207ENST00000507594 ERICH6BQ5W0A0 696 aa11.16□□□□□ -0.62
SMAD1-207ENST00000507594 B4GALNT3Q6L9W6 998 aa11.16□□□□□ -0.62
SMAD1-207ENST00000507594 DPP8Q6V1X1 898 aaPredicted RBP11.16□□□□□ -0.62
SMAD1-207ENST00000507594 HELBQ8NG08 1087 aaPredicted RBP11.16□□□□□ -0.62
SMAD1-207ENST00000507594 PUS3Q9BZE2 481 aaKnown RBP11.16□□□□□ -0.62
SMAD1-207ENST00000507594 ANKRD2Q9GZV1 360 aa11.16□□□□□ -0.62
SMAD1-207ENST00000507594 COPRSQ9NQ92 184 aa11.16□□□□□ -0.62
SMAD1-207ENST00000507594 BSDC1Q9NW68 430 aaPredicted RBP11.16□□□□□ -0.62
SMAD1-207ENST00000507594 PPP4R2Q9NY27 417 aa11.16□□□□□ -0.62
SMAD1-207ENST00000507594 CEP126Q9P2H0 1117 aa11.16□□□□□ -0.62
SMAD1-207ENST00000507594 NSFL1CQ9UNZ2 370 aaKnown RBP11.16□□□□□ -0.62
SMAD1-207ENST00000507594 MROH5Q6ZUA9 1318 aa11.15□□□□□ -0.62
SMAD1-207ENST00000507594 G3V3G9 751 aa11.15□□□□□ -0.62
SMAD1-207ENST00000507594 C6orf229H3BNL8 230 aa11.15□□□□□ -0.62
SMAD1-207ENST00000507594 RFX5P48382 616 aaPredicted RBP11.15□□□□□ -0.62
SMAD1-207ENST00000507594 CHRNDQ07001 517 aa11.15□□□□□ -0.62
SMAD1-207ENST00000507594 SIRT2Q8IXJ6 389 aa11.15□□□□□ -0.62
SMAD1-207ENST00000507594 GTF3C3Q9Y5Q9 886 aa11.15□□□□□ -0.62
SMAD1-207ENST00000507594 BRCA1P38398 1863 aaKnown RBP11.15□□□□□ -0.63
SMAD1-207ENST00000507594 COL4A1P02462 1669 aa11.14□□□□□ -0.63
SMAD1-207ENST00000507594 TAF5LO75529 589 aa11.14□□□□□ -0.63
SMAD1-207ENST00000507594 CIAO1O76071 339 aa11.14□□□□□ -0.63
SMAD1-207ENST00000507594 UFL1O94874 794 aa11.14□□□□□ -0.63
SMAD1-207ENST00000507594 HDAC1Q13547 482 aaPredicted RBP11.14□□□□□ -0.63
SMAD1-207ENST00000507594 GORABQ5T7V8 394 aa11.14□□□□□ -0.63
SMAD1-207ENST00000507594 OLFM4Q6UX06 510 aa11.14□□□□□ -0.63
SMAD1-207ENST00000507594 SP8Q8IXZ3 490 aa11.14□□□□□ -0.63
SMAD1-207ENST00000507594 RASEFQ8IZ41 740 aa11.14□□□□□ -0.63
SMAD1-207ENST00000507594 MPNDQ8N594 471 aa11.14□□□□□ -0.63
SMAD1-207ENST00000507594 GCC1Q96CN9 775 aa11.14□□□□□ -0.63
SMAD1-207ENST00000507594 NEUROD6Q96NK8 337 aa11.14□□□□□ -0.63
SMAD1-207ENST00000507594 GGA1Q9UJY5 639 aa11.14□□□□□ -0.63
SMAD1-207ENST00000507594 ATP6V0A2Q9Y487 856 aa11.14□□□□□ -0.63
SMAD1-207ENST00000507594 XDHP47989 1333 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms