RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 SARM1Q6SZW1 724 aa17.69■□□□□ 0.42
HERC6-206ENST00000506714 CLIP2Q9UDT6 1046 aa17.69■□□□□ 0.42
HERC6-206ENST00000506714 PRAMEF22A3QJZ6 481 aa17.69■□□□□ 0.42
HERC6-206ENST00000506714 NEURL1BA8MQ27 555 aa17.69■□□□□ 0.42
HERC6-206ENST00000506714 HMGB1P09429 215 aaKnown RBP17.69■□□□□ 0.42
HERC6-206ENST00000506714 PDIA6Q15084 440 aa17.69■□□□□ 0.42
HERC6-206ENST00000506714 ATL3Q6DD88 541 aa17.69■□□□□ 0.42
HERC6-206ENST00000506714 GTPBP4Q9BZE4 634 aaKnown RBP17.69■□□□□ 0.42
HERC6-206ENST00000506714 DNAJC25Q9H1X3 360 aa17.69■□□□□ 0.42
HERC6-206ENST00000506714 SLAIN2Q9P270 581 aa17.69■□□□□ 0.42
HERC6-206ENST00000506714 FAM177BA6PVY3 158 aa17.68■□□□□ 0.42
HERC6-206ENST00000506714 GOLGA6L19H0YKK7 550 aa17.68■□□□□ 0.42
HERC6-206ENST00000506714 ZSCAN20P17040 1043 aaPredicted RBP17.68■□□□□ 0.42
HERC6-206ENST00000506714 GCKRQ14397 625 aa17.68■□□□□ 0.42
HERC6-206ENST00000506714 Q6ZUG5 572 aa17.68■□□□□ 0.42
HERC6-206ENST00000506714 FEZ1Q99689 392 aa17.68■□□□□ 0.42
HERC6-206ENST00000506714 LAMA4Q16363 1823 aa17.68■□□□□ 0.42
HERC6-206ENST00000506714 HSP90B1P14625 803 aaKnown RBP17.68■□□□□ 0.42
HERC6-206ENST00000506714 SMARCC2Q8TAQ2 1214 aa17.68■□□□□ 0.42
HERC6-206ENST00000506714 JAK2O60674 1132 aa17.67■□□□□ 0.42
HERC6-206ENST00000506714 TNNT1P13805 278 aa17.67■□□□□ 0.42
HERC6-206ENST00000506714 CBX1P83916 185 aa17.67■□□□□ 0.42
HERC6-206ENST00000506714 LRMPQ12912 555 aa17.67■□□□□ 0.42
HERC6-206ENST00000506714 MCMDC2Q4G0Z9 681 aa17.67■□□□□ 0.42
HERC6-206ENST00000506714 NAA16Q6N069 864 aaPredicted RBP17.67■□□□□ 0.42
HERC6-206ENST00000506714 METTL22Q9BUU2 404 aaPredicted RBP17.67■□□□□ 0.42
HERC6-206ENST00000506714 NRBP1Q9UHY1 535 aa17.67■□□□□ 0.42
HERC6-206ENST00000506714 TNNI3KQ59H18 835 aa17.67■□□□□ 0.42
HERC6-206ENST00000506714 TICAM2Q86XR7 235 aa17.67■□□□□ 0.42
HERC6-206ENST00000506714 CHMP4CQ96CF2 233 aa17.67■□□□□ 0.42
HERC6-206ENST00000506714 MRFAP1L1Q96HT8 127 aa17.67■□□□□ 0.42
HERC6-206ENST00000506714 FPGT-TNNI3KV9GXZ4 949 aa17.67■□□□□ 0.42
HERC6-206ENST00000506714 SPATA31A3Q5VYP0 1347 aa17.66■□□□□ 0.42
HERC6-206ENST00000506714 ZC3H6P61129 1189 aaKnown RBP17.66■□□□□ 0.42
HERC6-206ENST00000506714 STX1AQ16623 288 aa17.66■□□□□ 0.42
HERC6-206ENST00000506714 ATP2B3Q16720 1220 aa17.66■□□□□ 0.42
HERC6-206ENST00000506714 KLHDC4Q8TBB5 520 aa17.66■□□□□ 0.42
HERC6-206ENST00000506714 C16orf45Q96MC5 204 aaPredicted RBP17.66■□□□□ 0.42
HERC6-206ENST00000506714 RCOR1Q9UKL0 485 aa17.66■□□□□ 0.42
HERC6-206ENST00000506714 COL15A1P39059 1388 aa17.66■□□□□ 0.42
HERC6-206ENST00000506714 AFDNP55196 1824 aaKnown RBP17.66■□□□□ 0.42
HERC6-206ENST00000506714 SCN11AQ9UI33 1791 aa17.66■□□□□ 0.42
HERC6-206ENST00000506714 PFKFB2O60825 505 aa17.65■□□□□ 0.42
HERC6-206ENST00000506714 IQCB1Q15051 598 aa17.65■□□□□ 0.42
HERC6-206ENST00000506714 ANKRD24Q8TF21 1146 aa17.65■□□□□ 0.42
HERC6-206ENST00000506714 PRDM10Q9NQV6 1147 aa17.65■□□□□ 0.42
HERC6-206ENST00000506714 DBNLQ9UJU6 430 aaKnown RBP17.65■□□□□ 0.42
HERC6-206ENST00000506714 C5P01031 1676 aa17.65■□□□□ 0.42
HERC6-206ENST00000506714 FGD1P98174 961 aa17.65■□□□□ 0.42
HERC6-206ENST00000506714 CACTINQ8WUQ7 758 aaKnown RBP17.65■□□□□ 0.42
HERC6-206ENST00000506714 TPD52L1Q16890 204 aaPredicted RBP17.64■□□□□ 0.41
HERC6-206ENST00000506714 ZNF790Q6PG37 636 aa17.64■□□□□ 0.41
HERC6-206ENST00000506714 HAUS7Q99871 368 aa17.64■□□□□ 0.41
HERC6-206ENST00000506714 ZNF609O15014 1411 aa17.64■□□□□ 0.41
HERC6-206ENST00000506714 CYP21A2P08686 494 aa17.64■□□□□ 0.41
HERC6-206ENST00000506714 SCRN1Q12765 414 aa17.64■□□□□ 0.41
HERC6-206ENST00000506714 CCDC112Q8NEF3 446 aa17.64■□□□□ 0.41
HERC6-206ENST00000506714 EDC3Q96F86 508 aaKnown RBP17.64■□□□□ 0.41
HERC6-206ENST00000506714 ZNF396Q96N95 335 aaPredicted RBP17.64■□□□□ 0.41
HERC6-206ENST00000506714 MYD88Q99836 296 aa17.64■□□□□ 0.41
HERC6-206ENST00000506714 RFX5P48382 616 aaPredicted RBP17.63■□□□□ 0.41
HERC6-206ENST00000506714 RBM6P78332 1123 aaKnown RBP17.63■□□□□ 0.41
HERC6-206ENST00000506714 PTPN12Q05209 780 aaKnown RBP17.63■□□□□ 0.41
HERC6-206ENST00000506714 NCBP1Q09161 790 aaKnown RBP17.63■□□□□ 0.41
HERC6-206ENST00000506714 EPHA10Q5JZY3 1008 aa17.63■□□□□ 0.41
HERC6-206ENST00000506714 CCDC73Q6ZRK6 1079 aa17.63■□□□□ 0.41
HERC6-206ENST00000506714 DHX32Q7L7V1 743 aaKnown RBP17.63■□□□□ 0.41
HERC6-206ENST00000506714 LRRC8AQ8IWT6 810 aa17.63■□□□□ 0.41
HERC6-206ENST00000506714 CCAR1Q8IX12 1150 aaKnown RBP17.63■□□□□ 0.41
HERC6-206ENST00000506714 CABLES1Q8TDN4 633 aa17.63■□□□□ 0.41
HERC6-206ENST00000506714 SH3TC1Q8TE82 1336 aa17.63■□□□□ 0.41
HERC6-206ENST00000506714 ADD1P35611 737 aaKnown RBP17.63■□□□□ 0.41
HERC6-206ENST00000506714 TFCP2Q12800 502 aa17.63■□□□□ 0.41
HERC6-206ENST00000506714 RABL6Q3YEC7 729 aaPredicted RBP17.63■□□□□ 0.41
HERC6-206ENST00000506714 XAGE3Q8WTP9 111 aa17.63■□□□□ 0.41
HERC6-206ENST00000506714 DDX11Q96FC9 970 aa17.63■□□□□ 0.41
HERC6-206ENST00000506714 CGNQ9P2M7 1197 aaKnown RBP17.63■□□□□ 0.41
HERC6-206ENST00000506714 BECN2A8MW95 431 aa17.62■□□□□ 0.41
HERC6-206ENST00000506714 ANKRD13DQ6ZTN6 518 aa17.62■□□□□ 0.41
HERC6-206ENST00000506714 COPS6Q7L5N1 327 aa17.62■□□□□ 0.41
HERC6-206ENST00000506714 NSUN7Q8NE18 718 aaKnown RBP17.62■□□□□ 0.41
HERC6-206ENST00000506714 ANO10Q9NW15 660 aa17.62■□□□□ 0.41
HERC6-206ENST00000506714 NHSL1Q5SYE7 1610 aa17.62■□□□□ 0.41
HERC6-206ENST00000506714 KINO60870 393 aaKnown RBP17.61■□□□□ 0.41
HERC6-206ENST00000506714 CCDC144BQ3MJ40 725 aa17.61■□□□□ 0.41
HERC6-206ENST00000506714 CCDC144CPQ8IYA2 1237 aa17.61■□□□□ 0.41
HERC6-206ENST00000506714 AXIN2Q9Y2T1 843 aa17.61■□□□□ 0.41
HERC6-206ENST00000506714 MYL6BP14649 208 aa17.61■□□□□ 0.41
HERC6-206ENST00000506714 CEP135Q66GS9 1140 aa17.61■□□□□ 0.41
HERC6-206ENST00000506714 KBTBD3Q8NAB2 608 aa17.61■□□□□ 0.41
HERC6-206ENST00000506714 DNAJC2Q99543 621 aaKnown RBP17.61■□□□□ 0.41
HERC6-206ENST00000506714 AGXT2Q9BYV1 514 aa17.61■□□□□ 0.41
HERC6-206ENST00000506714 HELLSQ9NRZ9 838 aa17.61■□□□□ 0.41
HERC6-206ENST00000506714 OGFRQ9NZT2 677 aa17.61■□□□□ 0.41
HERC6-206ENST00000506714 U2AF2P26368 475 aaKnown RBP eCLIP17.6■□□□□ 0.41
HERC6-206ENST00000506714 FAM160A1Q05DH4 1040 aa17.6■□□□□ 0.41
HERC6-206ENST00000506714 DSCC1Q9BVC3 393 aa17.6■□□□□ 0.41
HERC6-206ENST00000506714 NAT10Q9H0A0 1025 aaKnown RBP17.6■□□□□ 0.41
HERC6-206ENST00000506714 SLC52A2Q9HAB3 445 aa17.6■□□□□ 0.41
HERC6-206ENST00000506714 PALLDQ8WX93 1383 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms