RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 RPS12P25398 132 aaKnown RBP19.75■□□□□ 0.75
DDR1-258ENST00000506573 DBNDD1Q9H9R9 158 aa19.75■□□□□ 0.75
DDR1-258ENST00000506573 BSDC1Q9NW68 430 aaPredicted RBP19.75■□□□□ 0.75
DDR1-258ENST00000506573 E9PSI1 815 aa19.74■□□□□ 0.75
DDR1-258ENST00000506573 DPF2Q92785 391 aa19.74■□□□□ 0.75
DDR1-258ENST00000506573 PLA2G12BQ9BX93 195 aa19.74■□□□□ 0.75
DDR1-258ENST00000506573 SPINK5Q9NQ38 1064 aaPredicted RBP19.74■□□□□ 0.75
DDR1-258ENST00000506573 CNOT7Q9UIV1 285 aaKnown RBP19.74■□□□□ 0.75
DDR1-258ENST00000506573 CACNA1FO60840 1977 aa19.74■□□□□ 0.75
DDR1-258ENST00000506573 DOK7Q18PE1 504 aa19.73■□□□□ 0.75
DDR1-258ENST00000506573 ZC3H15Q8WU90 426 aaKnown RBP19.73■□□□□ 0.75
DDR1-258ENST00000506573 MPHOSPH8Q99549 860 aa19.73■□□□□ 0.75
DDR1-258ENST00000506573 GREM2Q9H772 168 aa19.73■□□□□ 0.75
DDR1-258ENST00000506573 TAF1P21675 1872 aa19.73■□□□□ 0.75
DDR1-258ENST00000506573 YDJCA8MPS7 323 aa19.72■□□□□ 0.75
DDR1-258ENST00000506573 DUOX1Q9NRD9 1551 aa19.72■□□□□ 0.75
DDR1-258ENST00000506573 MKRN1Q9UHC7 482 aaKnown RBP19.72■□□□□ 0.75
DDR1-258ENST00000506573 PSMD14O00487 310 aa19.71■□□□□ 0.75
DDR1-258ENST00000506573 ANKRD2Q9GZV1 360 aa19.71■□□□□ 0.75
DDR1-258ENST00000506573 C9orf78Q9NZ63 289 aaPredicted RBP19.71■□□□□ 0.75
DDR1-258ENST00000506573 ABT1Q9ULW3 272 aaKnown RBP19.71■□□□□ 0.75
DDR1-258ENST00000506573 ZNF521Q96K83 1311 aa19.71■□□□□ 0.75
DDR1-258ENST00000506573 ADAMTSL1Q8N6G6 1762 aa19.7■□□□□ 0.74
DDR1-258ENST00000506573 ANKRD18BA2A2Z9 1011 aa19.7■□□□□ 0.74
DDR1-258ENST00000506573 CCER2I3L3R5 266 aa19.7■□□□□ 0.74
DDR1-258ENST00000506573 ITGA6P23229 1130 aa19.7■□□□□ 0.74
DDR1-258ENST00000506573 MICALL2Q8IY33 904 aa19.7■□□□□ 0.74
DDR1-258ENST00000506573 MINPP1Q9UNW1 487 aa19.7■□□□□ 0.74
DDR1-258ENST00000506573 CNTNAP1P78357 1384 aa19.7■□□□□ 0.74
DDR1-258ENST00000506573 F6X3S4 739 aa19.69■□□□□ 0.74
DDR1-258ENST00000506573 BEND3Q5T5X7 828 aa19.69■□□□□ 0.74
DDR1-258ENST00000506573 SLC4A10Q6U841 1118 aa19.69■□□□□ 0.74
DDR1-258ENST00000506573 PODNQ7Z5L7 613 aa19.69■□□□□ 0.74
DDR1-258ENST00000506573 CHMP3Q9Y3E7 222 aa19.69■□□□□ 0.74
DDR1-258ENST00000506573 ALDH1L1O75891 902 aa19.68■□□□□ 0.74
DDR1-258ENST00000506573 CSF1RP07333 972 aa19.68■□□□□ 0.74
DDR1-258ENST00000506573 KCNJ4P48050 445 aa19.68■□□□□ 0.74
DDR1-258ENST00000506573 IFIT5Q13325 482 aaKnown RBP19.68■□□□□ 0.74
DDR1-258ENST00000506573 DEFB115Q30KQ5 88 aa19.68■□□□□ 0.74
DDR1-258ENST00000506573 GPR101Q96P66 508 aaPredicted RBP19.68■□□□□ 0.74
DDR1-258ENST00000506573 SRCIN1Q9C0H9 1055 aa19.68■□□□□ 0.74
DDR1-258ENST00000506573 LEMD3Q9Y2U8 911 aa19.68■□□□□ 0.74
DDR1-258ENST00000506573 ZBTB12Q9Y330 459 aaPredicted RBP19.68■□□□□ 0.74
DDR1-258ENST00000506573 GRM8O00222 908 aa19.67■□□□□ 0.74
DDR1-258ENST00000506573 CCT4P50991 539 aaKnown RBP19.67■□□□□ 0.74
DDR1-258ENST00000506573 CASP7P55210 303 aa19.67■□□□□ 0.74
DDR1-258ENST00000506573 FAM161AQ3B820 660 aa19.67■□□□□ 0.74
DDR1-258ENST00000506573 CDC37L1Q7L3B6 337 aa19.67■□□□□ 0.74
DDR1-258ENST00000506573 PGAP2Q9UHJ9 254 aa19.67■□□□□ 0.74
DDR1-258ENST00000506573 LTBP1Q14766 1721 aa19.67■□□□□ 0.74
DDR1-258ENST00000506573 VIL1P09327 827 aaKnown RBP19.66■□□□□ 0.74
DDR1-258ENST00000506573 CCDC57Q2TAC2 916 aa19.66■□□□□ 0.74
DDR1-258ENST00000506573 TAF7LQ5H9L4 462 aa19.66■□□□□ 0.74
DDR1-258ENST00000506573 AGBL3Q8NEM8 1001 aa19.66■□□□□ 0.74
DDR1-258ENST00000506573 PCNTO95613 3336 aa19.66■□□□□ 0.74
DDR1-258ENST00000506573 PTPRCP08575 1304 aa19.66■□□□□ 0.74
DDR1-258ENST00000506573 MYH3P11055 1940 aa19.66■□□□□ 0.74
DDR1-258ENST00000506573 MED23Q9ULK4 1368 aa19.66■□□□□ 0.74
DDR1-258ENST00000506573 USP17L3A6NCW0 530 aa19.65■□□□□ 0.74
DDR1-258ENST00000506573 USP17L4A6NCW7 530 aa19.65■□□□□ 0.74
DDR1-258ENST00000506573 RASSF10A6NK89 507 aa19.65■□□□□ 0.74
DDR1-258ENST00000506573 USP17L1Q7RTZ2 530 aa19.65■□□□□ 0.74
DDR1-258ENST00000506573 AIDAQ96BJ3 306 aa19.65■□□□□ 0.74
DDR1-258ENST00000506573 DCPSQ96C86 337 aaKnown RBP19.65■□□□□ 0.74
DDR1-258ENST00000506573 HSPA1AP0DMV8 641 aaKnown RBP19.64■□□□□ 0.73
DDR1-258ENST00000506573 HSPA1BP0DMV9 641 aaKnown RBP19.64■□□□□ 0.73
DDR1-258ENST00000506573 ECE1P42892 770 aa19.64■□□□□ 0.73
DDR1-258ENST00000506573 RSBN1LQ6PCB5 846 aaPredicted RBP19.64■□□□□ 0.73
DDR1-258ENST00000506573 PAXIP1Q6ZW49 1069 aaPredicted RBP19.64■□□□□ 0.73
DDR1-258ENST00000506573 COA1Q9GZY4 146 aa19.64■□□□□ 0.73
DDR1-258ENST00000506573 COL4A1P02462 1669 aa19.64■□□□□ 0.73
DDR1-258ENST00000506573 ZNF804BA4D1E1 1349 aa19.63■□□□□ 0.73
DDR1-258ENST00000506573 VEGFBP49765 207 aa19.63■□□□□ 0.73
DDR1-258ENST00000506573 SLFN5Q08AF3 891 aa19.63■□□□□ 0.73
DDR1-258ENST00000506573 TBC1D10BQ4KMP7 808 aaPredicted RBP19.63■□□□□ 0.73
DDR1-258ENST00000506573 RBM26Q5T8P6 1007 aaKnown RBP19.63■□□□□ 0.73
DDR1-258ENST00000506573 SAMD7Q7Z3H4 446 aa19.63■□□□□ 0.73
DDR1-258ENST00000506573 TRPM4Q8TD43 1214 aa19.63■□□□□ 0.73
DDR1-258ENST00000506573 KCNQ5Q9NR82 932 aa19.63■□□□□ 0.73
DDR1-258ENST00000506573 MYO3BQ8WXR4 1341 aa19.62■□□□□ 0.73
DDR1-258ENST00000506573 TRAF5O00463 557 aa19.62■□□□□ 0.73
DDR1-258ENST00000506573 CELF2O95319 508 aaKnown RBP19.62■□□□□ 0.73
DDR1-258ENST00000506573 MMP14P50281 582 aa19.62■□□□□ 0.73
DDR1-258ENST00000506573 HIRAP54198 1017 aaPredicted RBP19.62■□□□□ 0.73
DDR1-258ENST00000506573 KIF4BQ2VIQ3 1234 aa19.62■□□□□ 0.73
DDR1-258ENST00000506573 LMBR1LQ6UX01 489 aa19.62■□□□□ 0.73
DDR1-258ENST00000506573 OGFOD1Q8N543 542 aa19.62■□□□□ 0.73
DDR1-258ENST00000506573 CT47B1P0C2W7 299 aaPredicted RBP19.61■□□□□ 0.73
DDR1-258ENST00000506573 USP17L8P0C7I0 530 aa19.61■□□□□ 0.73
DDR1-258ENST00000506573 FOXO4P98177 505 aa19.61■□□□□ 0.73
DDR1-258ENST00000506573 CHRNDQ07001 517 aa19.61■□□□□ 0.73
DDR1-258ENST00000506573 ALDH1L2Q3SY69 923 aa19.61■□□□□ 0.73
DDR1-258ENST00000506573 IFFO2Q5TF58 517 aa19.61■□□□□ 0.73
DDR1-258ENST00000506573 MRPL50Q8N5N7 158 aaKnown RBP19.61■□□□□ 0.73
DDR1-258ENST00000506573 FBXW7Q969H0 707 aa19.61■□□□□ 0.73
DDR1-258ENST00000506573 GLIS2Q9BZE0 524 aaPredicted RBP19.61■□□□□ 0.73
DDR1-258ENST00000506573 ZNF408Q9H9D4 720 aa19.61■□□□□ 0.73
DDR1-258ENST00000506573 MAP2K1Q02750 393 aaPredicted RBP19.6■□□□□ 0.73
DDR1-258ENST00000506573 LDHAL6AQ6ZMR3 332 aa19.6■□□□□ 0.73
DDR1-258ENST00000506573 KRT26Q7Z3Y9 468 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms