RNA–Protein interactions for RNA: ENST00000506351.6

TNPO1-204, Transcript of transportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-204ENST00000506351 C4BP0C0L5 1744 aa8.76□□□□□ -1.01
TNPO1-204ENST00000506351 IRS4O14654 1257 aaPredicted RBP8.76□□□□□ -1.01
TNPO1-204ENST00000506351 ITPK1Q13572 414 aa8.76□□□□□ -1.01
TNPO1-204ENST00000506351 SKOR2Q2VWA4 1001 aaPredicted RBP8.76□□□□□ -1.01
TNPO1-204ENST00000506351 TICAM2Q86XR7 235 aa8.76□□□□□ -1.01
TNPO1-204ENST00000506351 TTLL11Q8NHH1 800 aa8.76□□□□□ -1.01
TNPO1-204ENST00000506351 GREM2Q9H772 168 aa8.76□□□□□ -1.01
TNPO1-204ENST00000506351 PDRG1Q9NUG6 133 aa8.76□□□□□ -1.01
TNPO1-204ENST00000506351 LIMCH1Q9UPQ0 1083 aa8.76□□□□□ -1.01
TNPO1-204ENST00000506351 AKAP2Q9Y2D5 859 aa8.76□□□□□ -1.01
TNPO1-204ENST00000506351 CYP46A1Q9Y6A2 500 aa8.76□□□□□ -1.01
TNPO1-204ENST00000506351 TAF1P21675 1872 aa8.76□□□□□ -1.01
TNPO1-204ENST00000506351 MYH13Q9UKX3 1938 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 GOLIM4O00461 696 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 BRD1O95696 1058 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 CHGBP05060 677 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 IFIT1P09914 478 aaKnown RBP8.75□□□□□ -1.01
TNPO1-204ENST00000506351 ITGA6P23229 1130 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 RNF20Q5VTR2 975 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 USPL1Q5W0Q7 1092 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 HMG20BQ9P0W2 317 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 TRMT112Q9UI30 125 aaKnown RBP8.75□□□□□ -1.01
TNPO1-204ENST00000506351 PDE8AO60658 829 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 LARGE1O95461 756 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 ADORA1P30542 326 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 VPS72Q15906 364 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 MCMDC2Q4G0Z9 681 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 MCTP1Q6DN14 999 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 CCDC129Q6ZRS4 1044 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 GZF1Q9H116 711 aaPredicted RBP8.75□□□□□ -1.01
TNPO1-204ENST00000506351 ANKRD18BA2A2Z9 1011 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 UBAP1LF5GYI3 381 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 XAGE2Q96GT9 111 aa8.75□□□□□ -1.01
TNPO1-204ENST00000506351 SEC62Q99442 399 aaKnown RBP8.75□□□□□ -1.01
TNPO1-204ENST00000506351 COL4A1P02462 1669 aa8.74□□□□□ -1.01
TNPO1-204ENST00000506351 CAMTA2O94983 1202 aa8.74□□□□□ -1.01
TNPO1-204ENST00000506351 PSMA5P28066 241 aa8.74□□□□□ -1.01
TNPO1-204ENST00000506351 FAM98CQ17RN3 349 aaKnown RBP8.74□□□□□ -1.01
TNPO1-204ENST00000506351 TSGA10IPQ3SY00 556 aa8.74□□□□□ -1.01
TNPO1-204ENST00000506351 TTC39AQ5SRH9 613 aa8.74□□□□□ -1.01
TNPO1-204ENST00000506351 SMARCC1Q92922 1105 aaPredicted RBP8.74□□□□□ -1.01
TNPO1-204ENST00000506351 HELLSQ9NRZ9 838 aa8.74□□□□□ -1.01
TNPO1-204ENST00000506351 RIPOR2Q9Y4F9 1068 aa8.74□□□□□ -1.01
TNPO1-204ENST00000506351 TAF6LQ9Y6J9 622 aa8.74□□□□□ -1.01
TNPO1-204ENST00000506351 FSD2A1L4K1 749 aa8.74□□□□□ -1.01
TNPO1-204ENST00000506351 ZMYM1Q5SVZ6 1142 aa8.74□□□□□ -1.01
TNPO1-204ENST00000506351 AK7Q96M32 723 aa8.74□□□□□ -1.01
TNPO1-204ENST00000506351 C8orf37Q96NL8 207 aa8.74□□□□□ -1.01
TNPO1-204ENST00000506351 LARP6Q9BRS8 491 aaKnown RBP8.74□□□□□ -1.01
TNPO1-204ENST00000506351 U3KPZ7 1027 aaPredicted RBP8.74□□□□□ -1.01
TNPO1-204ENST00000506351 KCNQ2O43526 872 aa8.73□□□□□ -1.01
TNPO1-204ENST00000506351 ATP2B3Q16720 1220 aa8.73□□□□□ -1.01
TNPO1-204ENST00000506351 METTL24Q5JXM2 366 aa8.73□□□□□ -1.01
TNPO1-204ENST00000506351 CCDC158Q5M9N0 1113 aa8.73□□□□□ -1.01
TNPO1-204ENST00000506351 VGLL2Q8N8G2 317 aa8.73□□□□□ -1.01
TNPO1-204ENST00000506351 ZSCAN31Q96LW9 406 aaPredicted RBP8.73□□□□□ -1.01
TNPO1-204ENST00000506351 SH2B1Q9NRF2 756 aaPredicted RBP8.73□□□□□ -1.01
TNPO1-204ENST00000506351 RPS6KB1P23443 525 aa8.73□□□□□ -1.01
TNPO1-204ENST00000506351 ST3GAL1Q11201 340 aa8.73□□□□□ -1.01
TNPO1-204ENST00000506351 COL9A3Q14050 684 aaPredicted RBP8.73□□□□□ -1.01
TNPO1-204ENST00000506351 KLHL40Q2TBA0 621 aa8.73□□□□□ -1.01
TNPO1-204ENST00000506351 L1TD1Q5T7N2 865 aaKnown RBP8.73□□□□□ -1.01
TNPO1-204ENST00000506351 SUSD4Q5VX71 490 aa8.73□□□□□ -1.01
TNPO1-204ENST00000506351 BLOC1S2Q6QNY1 142 aa8.73□□□□□ -1.01
TNPO1-204ENST00000506351 ALDH8A1Q9H2A2 487 aaPredicted RBP8.73□□□□□ -1.01
TNPO1-204ENST00000506351 LMBRD1Q9NUN5 540 aa8.73□□□□□ -1.01
TNPO1-204ENST00000506351 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.73□□□□□ -1.01
TNPO1-204ENST00000506351 MAST3O60307 1309 aa8.73□□□□□ -1.01
TNPO1-204ENST00000506351 RNF113AO15541 343 aaKnown RBP8.72□□□□□ -1.01
TNPO1-204ENST00000506351 SLFNL1Q499Z3 407 aa8.72□□□□□ -1.01
TNPO1-204ENST00000506351 GORABQ5T7V8 394 aa8.72□□□□□ -1.01
TNPO1-204ENST00000506351 FOXD4L5Q5VV16 416 aaPredicted RBP8.72□□□□□ -1.01
TNPO1-204ENST00000506351 LDHAL6AQ6ZMR3 332 aa8.72□□□□□ -1.01
TNPO1-204ENST00000506351 FOXD4L4Q8WXT5 416 aaPredicted RBP8.72□□□□□ -1.01
TNPO1-204ENST00000506351 CNNM1Q9NRU3 951 aa8.72□□□□□ -1.01
TNPO1-204ENST00000506351 SCARF1Q14162 830 aa8.72□□□□□ -1.01
TNPO1-204ENST00000506351 KRT32Q14532 448 aa8.72□□□□□ -1.01
TNPO1-204ENST00000506351 PARP10Q53GL7 1025 aa8.72□□□□□ -1.01
TNPO1-204ENST00000506351 CCDC83Q8IWF9 413 aa8.72□□□□□ -1.01
TNPO1-204ENST00000506351 NGLY1Q96IV0 654 aa8.72□□□□□ -1.01
TNPO1-204ENST00000506351 DSCC1Q9BVC3 393 aa8.72□□□□□ -1.01
TNPO1-204ENST00000506351 WDR33Q9C0J8 1336 aaKnown RBP8.72□□□□□ -1.01
TNPO1-204ENST00000506351 GOLGA6L3A6NEY3 463 aa8.72□□□□□ -1.01
TNPO1-204ENST00000506351 LINC00116Q8NCU8 138 aa8.72□□□□□ -1.01
TNPO1-204ENST00000506351 UTP14AQ9BVJ6 771 aaKnown RBP8.72□□□□□ -1.01
TNPO1-204ENST00000506351 RTL9Q8NET4 1388 aa8.72□□□□□ -1.01
TNPO1-204ENST00000506351 ATRNO75882 1429 aa8.72□□□□□ -1.01
TNPO1-204ENST00000506351 ECM29Q5VYK3 1845 aa8.71□□□□□ -1.01
TNPO1-204ENST00000506351 M0R2C6 588 aa8.71□□□□□ -1.01
TNPO1-204ENST00000506351 NTSR2O95665 410 aa8.71□□□□□ -1.01
TNPO1-204ENST00000506351 TOB2Q14106 344 aaPredicted RBP8.71□□□□□ -1.01
TNPO1-204ENST00000506351 ANKRD1Q15327 319 aa8.71□□□□□ -1.01
TNPO1-204ENST00000506351 ME3Q16798 604 aa8.71□□□□□ -1.01
TNPO1-204ENST00000506351 FNBP4Q8N3X1 1017 aaPredicted RBP8.71□□□□□ -1.01
TNPO1-204ENST00000506351 CHAMP1Q96JM3 812 aa8.71□□□□□ -1.01
TNPO1-204ENST00000506351 TPCN1Q9ULQ1 816 aa8.71□□□□□ -1.01
TNPO1-204ENST00000506351 SMC3Q9UQE7 1217 aa8.71□□□□□ -1.01
TNPO1-204ENST00000506351 DDX49Q9Y6V7 483 aaKnown RBP8.71□□□□□ -1.01
TNPO1-204ENST00000506351 SPATA31A6Q5VVP1 1343 aa8.71□□□□□ -1.01
TNPO1-204ENST00000506351 CYP21A2P08686 494 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 217.8 ms