RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 EIF2B5Q13144 721 aaKnown RBP10.48□□□□□ -0.73
HTT-203ENST00000506137 COL13A1Q5TAT6 717 aaPredicted RBP10.48□□□□□ -0.73
HTT-203ENST00000506137 PIP4P2Q8N4L2 257 aa10.48□□□□□ -0.73
HTT-203ENST00000506137 ZNF496Q96IT1 587 aaPredicted RBP10.48□□□□□ -0.73
HTT-203ENST00000506137 ZNF594Q96JF6 807 aaPredicted RBP10.48□□□□□ -0.73
HTT-203ENST00000506137 ARNT2Q9HBZ2 717 aa10.48□□□□□ -0.73
HTT-203ENST00000506137 MED4Q9NPJ6 270 aa10.48□□□□□ -0.73
HTT-203ENST00000506137 USP25Q9UHP3 1055 aa10.48□□□□□ -0.73
HTT-203ENST00000506137 MED14O60244 1454 aa10.48□□□□□ -0.73
HTT-203ENST00000506137 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.48□□□□□ -0.73
HTT-203ENST00000506137 UGGT2Q9NYU1 1516 aa10.48□□□□□ -0.73
HTT-203ENST00000506137 DEPDC5O75140 1603 aa10.47□□□□□ -0.73
HTT-203ENST00000506137 BIVM-ERCC5R4GMW8 1640 aa10.47□□□□□ -0.73
HTT-203ENST00000506137 IQGAP1P46940 1657 aa10.47□□□□□ -0.73
HTT-203ENST00000506137 ERICH4A6NGS2 130 aa10.47□□□□□ -0.73
HTT-203ENST00000506137 FXR2P51116 673 aaKnown RBP eCLIP10.47□□□□□ -0.737e-7■□□□□ 8.2
HTT-203ENST00000506137 AMPD3Q01432 767 aa10.47□□□□□ -0.73
HTT-203ENST00000506137 INO80DQ53TQ3 878 aaPredicted RBP10.47□□□□□ -0.73
HTT-203ENST00000506137 SYCP2LQ5T4T6 812 aa10.47□□□□□ -0.73
HTT-203ENST00000506137 C9orf131Q5VYM1 1079 aa10.47□□□□□ -0.73
HTT-203ENST00000506137 POTEHQ6S545 545 aa10.47□□□□□ -0.73
HTT-203ENST00000506137 GIGYF2Q6Y7W6 1299 aaKnown RBP10.47□□□□□ -0.73
HTT-203ENST00000506137 IFNL3Q8IZI9 196 aa10.47□□□□□ -0.73
HTT-203ENST00000506137 MYRIPQ8NFW9 859 aa10.47□□□□□ -0.73
HTT-203ENST00000506137 ZNF396Q96N95 335 aaPredicted RBP10.47□□□□□ -0.73
HTT-203ENST00000506137 BRMS1Q9HCU9 246 aa10.47□□□□□ -0.73
HTT-203ENST00000506137 DCAF16Q9NXF7 216 aa10.47□□□□□ -0.73
HTT-203ENST00000506137 HOXC10Q9NYD6 342 aa10.47□□□□□ -0.73
HTT-203ENST00000506137 EVLQ9UI08 416 aaPredicted RBP10.47□□□□□ -0.73
HTT-203ENST00000506137 HDAC9Q9UKV0 1011 aa10.47□□□□□ -0.73
HTT-203ENST00000506137 PPP2R3BQ9Y5P8 575 aa10.47□□□□□ -0.73
HTT-203ENST00000506137 NPHP4O75161 1426 aaPredicted RBP10.47□□□□□ -0.73
HTT-203ENST00000506137 KIAA0754O94854 1291 aa10.46□□□□□ -0.73
HTT-203ENST00000506137 U2AF1L5P0DN76 240 aaPredicted RBP10.46□□□□□ -0.73
HTT-203ENST00000506137 NAT2P11245 290 aa10.46□□□□□ -0.73
HTT-203ENST00000506137 STIP1P31948 543 aaKnown RBP10.46□□□□□ -0.73
HTT-203ENST00000506137 CCT2P78371 535 aaKnown RBP10.46□□□□□ -0.73
HTT-203ENST00000506137 U2AF1Q01081 240 aaKnown RBP eCLIP10.46□□□□□ -0.73
HTT-203ENST00000506137 DDB1Q16531 1140 aa10.46□□□□□ -0.73
HTT-203ENST00000506137 RC3H1Q5TC82 1133 aaKnown RBP10.46□□□□□ -0.73
HTT-203ENST00000506137 TAS1R3Q7RTX0 852 aa10.46□□□□□ -0.73
HTT-203ENST00000506137 ZNF467Q7Z7K2 595 aaPredicted RBP10.46□□□□□ -0.73
HTT-203ENST00000506137 TAX1BP1Q86VP1 789 aa10.46□□□□□ -0.73
HTT-203ENST00000506137 TTC30AQ86WT1 665 aa10.46□□□□□ -0.73
HTT-203ENST00000506137 ANKLE2Q86XL3 938 aa10.46□□□□□ -0.73
HTT-203ENST00000506137 C17orf50Q8WW18 174 aa10.46□□□□□ -0.73
HTT-203ENST00000506137 IER2Q9BTL4 223 aa10.46□□□□□ -0.73
HTT-203ENST00000506137 TRIM6Q9C030 488 aaPredicted RBP10.46□□□□□ -0.73
HTT-203ENST00000506137 PARP2Q9UGN5 583 aa10.46□□□□□ -0.73
HTT-203ENST00000506137 ZMYM3Q14202 1370 aa10.46□□□□□ -0.74
HTT-203ENST00000506137 KDM5DQ9BY66 1539 aa10.45□□□□□ -0.74
HTT-203ENST00000506137 GRXCR2A6NFK2 248 aa10.45□□□□□ -0.74
HTT-203ENST00000506137 FIBPO43427 364 aa10.45□□□□□ -0.74
HTT-203ENST00000506137 BPNT1O95861 308 aa10.45□□□□□ -0.74
HTT-203ENST00000506137 CDC27P30260 824 aa10.45□□□□□ -0.74
HTT-203ENST00000506137 KIF22Q14807 665 aa10.45□□□□□ -0.74
HTT-203ENST00000506137 C11orf91Q3C1V1 193 aa10.45□□□□□ -0.74
HTT-203ENST00000506137 TTC31Q49AM3 519 aaPredicted RBP10.45□□□□□ -0.74
HTT-203ENST00000506137 PLEKHG4Q58EX7 1191 aa10.45□□□□□ -0.74
HTT-203ENST00000506137 HYIQ5T013 277 aa10.45□□□□□ -0.74
HTT-203ENST00000506137 DEFB132Q7Z7B7 95 aa10.45□□□□□ -0.74
HTT-203ENST00000506137 HELQQ8TDG4 1101 aa10.45□□□□□ -0.74
HTT-203ENST00000506137 VMP1Q96GC9 406 aa10.45□□□□□ -0.74
HTT-203ENST00000506137 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.45□□□□□ -0.74
HTT-203ENST00000506137 BIN2Q9UBW5 565 aaPredicted RBP10.45□□□□□ -0.74
HTT-203ENST00000506137 PCSK1NQ9UHG2 260 aa10.45□□□□□ -0.74
HTT-203ENST00000506137 CCDC196A0A1B0GTZ2 297 aa10.44□□□□□ -0.74
HTT-203ENST00000506137 ANKRD18BA2A2Z9 1011 aa10.44□□□□□ -0.74
HTT-203ENST00000506137 PRRT4C9JH25 899 aa10.44□□□□□ -0.74
HTT-203ENST00000506137 CPLX1O14810 134 aa10.44□□□□□ -0.74
HTT-203ENST00000506137 SLC26A4O43511 780 aa10.44□□□□□ -0.74
HTT-203ENST00000506137 E2F6O75461 281 aa10.44□□□□□ -0.74
HTT-203ENST00000506137 LMOD1P29536 600 aaPredicted RBP10.44□□□□□ -0.74
HTT-203ENST00000506137 KIF5BP33176 963 aa10.44□□□□□ -0.74
HTT-203ENST00000506137 MLLT3P42568 568 aaPredicted RBP10.44□□□□□ -0.74
HTT-203ENST00000506137 TAF7Q15545 349 aaPredicted RBP10.44□□□□□ -0.74
HTT-203ENST00000506137 PARP10Q53GL7 1025 aa10.44□□□□□ -0.74
HTT-203ENST00000506137 MFSD4BQ5TF39 518 aa10.44□□□□□ -0.74
HTT-203ENST00000506137 ANKRD45Q5TZF3 282 aa10.44□□□□□ -0.74
HTT-203ENST00000506137 TSHZ3Q63HK5 1081 aa10.44□□□□□ -0.74
HTT-203ENST00000506137 KANK3Q6NY19 840 aa10.44□□□□□ -0.74
HTT-203ENST00000506137 PPP1R18Q6NYC8 613 aa10.44□□□□□ -0.74
HTT-203ENST00000506137 WDR75Q8IWA0 830 aaKnown RBP10.44□□□□□ -0.74
HTT-203ENST00000506137 SUGP1Q8IWZ8 645 aaKnown RBP10.44□□□□□ -0.74
HTT-203ENST00000506137 TEX9Q8N6V9 391 aa10.44□□□□□ -0.74
HTT-203ENST00000506137 XPO4Q9C0E2 1151 aaKnown RBP10.44□□□□□ -0.74
HTT-203ENST00000506137 IQCGQ9H095 443 aaKnown RBP10.44□□□□□ -0.74
HTT-203ENST00000506137 CD248Q9HCU0 757 aa10.44□□□□□ -0.74
HTT-203ENST00000506137 CAMTA1Q9Y6Y1 1673 aa10.44□□□□□ -0.74
HTT-203ENST00000506137 TMCO5BA8MYB1 307 aa10.43□□□□□ -0.74
HTT-203ENST00000506137 GPR37O15354 613 aa10.43□□□□□ -0.74
HTT-203ENST00000506137 PRKAR2AP13861 404 aaKnown RBP10.43□□□□□ -0.74
HTT-203ENST00000506137 SESN3P58005 492 aa10.43□□□□□ -0.74
HTT-203ENST00000506137 PDE1CQ14123 709 aaPredicted RBP10.43□□□□□ -0.74
HTT-203ENST00000506137 GRAMD1BQ3KR37 738 aa10.43□□□□□ -0.74
HTT-203ENST00000506137 N4BP2L2Q92802 583 aaPredicted RBP10.43□□□□□ -0.74
HTT-203ENST00000506137 UIMC1Q96RL1 719 aa10.43□□□□□ -0.74
HTT-203ENST00000506137 ATP10BO94823 1461 aa10.42□□□□□ -0.74
HTT-203ENST00000506137 NINLQ9Y2I6 1382 aa10.42□□□□□ -0.74
HTT-203ENST00000506137 MDM2Q00987 491 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms