RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 CETN1Q12798 172 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 DOK7Q18PE1 504 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 PPP1R21Q6ZMI0 780 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 RAB34Q9BZG1 259 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 CEP131Q9UPN4 1083 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 SETD5Q9C0A6 1442 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 ACTN2P35609 894 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 ATP6V1E1P36543 226 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 HAND2P61296 217 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 C2CD5Q86YS7 1000 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 SLC4A7Q9Y6M7 1214 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 IDEP14735 1019 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 IRX5P78411 483 aaPredicted RBP5.93□□□□□ -1.46
MATR3-211ENST00000505625 TWISTNBQ3B726 338 aaPredicted RBP5.93□□□□□ -1.46
MATR3-211ENST00000505625 RAET1EQ8TD07 263 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 MORC4Q8TE76 937 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 GBP3Q9H0R5 595 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 CCDC8Q9H0W5 538 aaPredicted RBP5.93□□□□□ -1.46
MATR3-211ENST00000505625 CASTP20810 708 aaKnown RBP5.93□□□□□ -1.46
MATR3-211ENST00000505625 TPD52P55327 224 aaPredicted RBP5.93□□□□□ -1.46
MATR3-211ENST00000505625 CEP135Q66GS9 1140 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 SIX5Q8N196 739 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 NUDT16Q96DE0 195 aaKnown RBP5.93□□□□□ -1.46
MATR3-211ENST00000505625 AP5M1Q9H0R1 490 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 DACH1Q9UI36 760 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 ZNF644Q9H582 1327 aaPredicted RBP5.93□□□□□ -1.46
MATR3-211ENST00000505625 CCDC40Q4G0X9 1142 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 TPTE2Q6XPS3 522 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 STXBP4Q6ZWJ1 553 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 FCHSD1Q86WN1 690 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 C2orf69Q8N8R5 385 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.93□□□□□ -1.46
MATR3-211ENST00000505625 IKBKGQ9Y6K9 419 aa5.93□□□□□ -1.46
MATR3-211ENST00000505625 APOBRQ0VD83 1088 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 ISM2Q6H9L7 571 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 PANK1Q8TE04 598 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 TBC1D5Q92609 795 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 LRRC59Q96AG4 307 aaKnown RBP5.92□□□□□ -1.46
MATR3-211ENST00000505625 PHF8Q9UPP1 1060 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 FIBPO43427 364 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 YY1P25490 414 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 SEPT6Q14141 434 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 THUMPD2Q9BTF0 503 aaKnown RBP5.92□□□□□ -1.46
MATR3-211ENST00000505625 CWC25Q9NXE8 425 aaPredicted RBP5.92□□□□□ -1.46
MATR3-211ENST00000505625 SSTR3P32745 418 aaPredicted RBP5.92□□□□□ -1.46
MATR3-211ENST00000505625 CCT2P78371 535 aaKnown RBP5.92□□□□□ -1.46
MATR3-211ENST00000505625 PLCB4Q15147 1175 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 FKBP15Q5T1M5 1219 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 IFIT1BQ5T764 474 aaKnown RBP5.92□□□□□ -1.46
MATR3-211ENST00000505625 MPNDQ8N594 471 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 MTRQ99707 1265 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 CCDC77Q9BR77 488 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 MFSD1Q9H3U5 465 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 AZI2Q9H6S1 392 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 ZBED4O75132 1171 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 OSBPP22059 807 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 IGFBP4P22692 258 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 IRX4P78413 519 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 ELMOD1Q8N336 334 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 WASF1Q92558 559 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 TSR2Q969E8 191 aaKnown RBP5.92□□□□□ -1.46
MATR3-211ENST00000505625 GTPBP4Q9BZE4 634 aaKnown RBP5.92□□□□□ -1.46
MATR3-211ENST00000505625 MAP3K2Q9Y2U5 619 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 NSMCE1Q8WV22 266 aa5.92□□□□□ -1.46
MATR3-211ENST00000505625 FMN1Q68DA7 1419 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 GADD45BO75293 160 aaPredicted RBP5.91□□□□□ -1.46
MATR3-211ENST00000505625 GNAI3P08754 354 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 HELBQ8NG08 1087 aaPredicted RBP5.91□□□□□ -1.46
MATR3-211ENST00000505625 SMARCC1Q92922 1105 aaPredicted RBP5.91□□□□□ -1.46
MATR3-211ENST00000505625 SRPK1Q96SB4 655 aaKnown RBP5.91□□□□□ -1.46
MATR3-211ENST00000505625 ARHGEF10LQ9HCE6 1279 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 AGTPBP1Q9UPW5 1226 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 CYP46A1Q9Y6A2 500 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 KIF15Q9NS87 1388 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 SYNJ2BP-COX16A0A087WUM0 186 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 FASTKD5Q7L8L6 764 aaKnown RBP5.91□□□□□ -1.46
MATR3-211ENST00000505625 HACE1Q8IYU2 909 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 ZGPATQ8N5A5 531 aaKnown RBP5.91□□□□□ -1.46
MATR3-211ENST00000505625 MIGA1Q8NAN2 632 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 COX16Q9P0S2 106 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 UBN2Q6ZU65 1347 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 M0R2C6 588 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 DPYSL4O14531 572 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 MYBP10242 640 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 TMEM67Q5HYA8 995 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 RNF214Q8ND24 703 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 LEO1Q8WVC0 666 aaPredicted RBP5.91□□□□□ -1.46
MATR3-211ENST00000505625 L3MBTL2Q969R5 705 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 JAKMIP1Q96N16 626 aaKnown RBP5.91□□□□□ -1.46
MATR3-211ENST00000505625 COPRSQ9NQ92 184 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 MBIPQ9NS73 344 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 SLC4A4Q9Y6R1 1079 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 IFFO1Q0D2I5 559 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 PRR23CQ6ZRP0 262 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 CFAP36Q96G28 342 aa5.91□□□□□ -1.46
MATR3-211ENST00000505625 GLRX3O76003 335 aaKnown RBP5.91□□□□□ -1.46
MATR3-211ENST00000505625 ZSCAN20P17040 1043 aaPredicted RBP5.91□□□□□ -1.46
MATR3-211ENST00000505625 FBXO31Q5XUX0 539 aaPredicted RBP5.91□□□□□ -1.46
MATR3-211ENST00000505625 SREK1Q8WXA9 508 aaKnown RBP5.91□□□□□ -1.46
MATR3-211ENST00000505625 LARP6Q9BRS8 491 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms