RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 CNNM1Q9NRU3 951 aa16.11■□□□□ 0.17
LMNA-220ENST00000504687 DIAPH3Q9NSV4 1193 aa16.11■□□□□ 0.17
LMNA-220ENST00000504687 DAXXQ9UER7 740 aaPredicted RBP16.11■□□□□ 0.17
LMNA-220ENST00000504687 AKAP11Q9UKA4 1901 aa16.1■□□□□ 0.17
LMNA-220ENST00000504687 SOCS7O14512 581 aa16.1■□□□□ 0.17
LMNA-220ENST00000504687 MCCP23508 829 aa16.1■□□□□ 0.17
LMNA-220ENST00000504687 TIMM10P62072 90 aa16.1■□□□□ 0.17
LMNA-220ENST00000504687 ATP2B3Q16720 1220 aa16.1■□□□□ 0.17
LMNA-220ENST00000504687 ERFEQ4G0M1 354 aa16.1■□□□□ 0.17
LMNA-220ENST00000504687 METTL24Q5JXM2 366 aa16.1■□□□□ 0.17
LMNA-220ENST00000504687 CCDC158Q5M9N0 1113 aa16.1■□□□□ 0.17
LMNA-220ENST00000504687 AMIGO3Q86WK7 504 aa16.1■□□□□ 0.17
LMNA-220ENST00000504687 PROM2Q8N271 834 aa16.1■□□□□ 0.17
LMNA-220ENST00000504687 KBTBD3Q8NAB2 608 aa16.1■□□□□ 0.17
LMNA-220ENST00000504687 TBC1D2Q9BYX2 928 aa16.1■□□□□ 0.17
LMNA-220ENST00000504687 SRP68Q9UHB9 627 aaKnown RBP16.1■□□□□ 0.17
LMNA-220ENST00000504687 QSER1Q2KHR3 1735 aa16.1■□□□□ 0.17
LMNA-220ENST00000504687 EP400Q96L91 3159 aa16.09■□□□□ 0.17
LMNA-220ENST00000504687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.09■□□□□ 0.17
LMNA-220ENST00000504687 MAP4K4O95819 1239 aaPredicted RBP16.09■□□□□ 0.17
LMNA-220ENST00000504687 IGHMBP2P38935 993 aaKnown RBP16.09■□□□□ 0.17
LMNA-220ENST00000504687 LPIN2Q92539 896 aa16.09■□□□□ 0.17
LMNA-220ENST00000504687 XAGE2Q96GT9 111 aa16.09■□□□□ 0.17
LMNA-220ENST00000504687 NEUROD6Q96NK8 337 aa16.09■□□□□ 0.17
LMNA-220ENST00000504687 LSG1Q9H089 658 aaKnown RBP16.09■□□□□ 0.17
LMNA-220ENST00000504687 MED23Q9ULK4 1368 aa16.09■□□□□ 0.17
LMNA-220ENST00000504687 NRXN2Q9P2S2 1712 aa16.08■□□□□ 0.17
LMNA-220ENST00000504687 HSPA4P34932 840 aa16.08■□□□□ 0.16
LMNA-220ENST00000504687 PUM3Q15397 648 aaKnown RBP16.08■□□□□ 0.16
LMNA-220ENST00000504687 KCNB2Q92953 911 aa16.08■□□□□ 0.16
LMNA-220ENST00000504687 MYH7P12883 1935 aa16.07■□□□□ 0.16
LMNA-220ENST00000504687 IFIT1P09914 478 aaKnown RBP16.07■□□□□ 0.16
LMNA-220ENST00000504687 TM4SF1P30408 202 aa16.07■□□□□ 0.16
LMNA-220ENST00000504687 LRRFIP1Q32MZ4 808 aaKnown RBP16.07■□□□□ 0.16
LMNA-220ENST00000504687 NBPF5PQ86XG9 351 aaPredicted RBP16.07■□□□□ 0.16
LMNA-220ENST00000504687 FLAD1Q8NFF5 587 aa16.07■□□□□ 0.16
LMNA-220ENST00000504687 AKT1S1Q96B36 256 aa16.07■□□□□ 0.16
LMNA-220ENST00000504687 NLRP3Q96P20 1036 aa16.07■□□□□ 0.16
LMNA-220ENST00000504687 CCDC85AQ96PX6 553 aaPredicted RBP16.07■□□□□ 0.16
LMNA-220ENST00000504687 MPHOSPH8Q99549 860 aa16.07■□□□□ 0.16
LMNA-220ENST00000504687 FSD1Q9BTV5 496 aa16.07■□□□□ 0.16
LMNA-220ENST00000504687 ANO2Q9NQ90 1003 aa16.07■□□□□ 0.16
LMNA-220ENST00000504687 BSDC1Q9NW68 430 aaPredicted RBP16.07■□□□□ 0.16
LMNA-220ENST00000504687 TNRC6CQ9HCJ0 1690 aaKnown RBP16.06■□□□□ 0.16
LMNA-220ENST00000504687 UQCRFS1P1P0C7P4 283 aa16.06■□□□□ 0.16
LMNA-220ENST00000504687 GYS1P13807 737 aa16.06■□□□□ 0.16
LMNA-220ENST00000504687 ARID4AP29374 1257 aaPredicted RBP16.06■□□□□ 0.16
LMNA-220ENST00000504687 NFIXQ14938 502 aa16.06■□□□□ 0.16
LMNA-220ENST00000504687 KIAA1211Q6ZU35 1233 aa16.06■□□□□ 0.16
LMNA-220ENST00000504687 HSCBQ8IWL3 235 aa16.06■□□□□ 0.16
LMNA-220ENST00000504687 IL25Q9H293 177 aa16.06■□□□□ 0.16
LMNA-220ENST00000504687 SEC31BQ9NQW1 1179 aa16.06■□□□□ 0.16
LMNA-220ENST00000504687 PAG1Q9NWQ8 432 aa16.06■□□□□ 0.16
LMNA-220ENST00000504687 DOCK2Q92608 1830 aa16.05■□□□□ 0.16
LMNA-220ENST00000504687 FAM177BA6PVY3 158 aa16.05■□□□□ 0.16
LMNA-220ENST00000504687 GTF2E1P29083 439 aaPredicted RBP16.05■□□□□ 0.16
LMNA-220ENST00000504687 TTC39AQ5SRH9 613 aa16.05■□□□□ 0.16
LMNA-220ENST00000504687 CWC27Q6UX04 472 aaKnown RBP16.05■□□□□ 0.16
LMNA-220ENST00000504687 CCDC125Q86Z20 511 aa16.05■□□□□ 0.16
LMNA-220ENST00000504687 ANKRD18AQ8IVF6 992 aa16.05■□□□□ 0.16
LMNA-220ENST00000504687 COL4A1P02462 1669 aa16.05■□□□□ 0.16
LMNA-220ENST00000504687 CCDC171Q6TFL3 1326 aa16.04■□□□□ 0.16
LMNA-220ENST00000504687 ZFYP08048 801 aaPredicted RBP16.04■□□□□ 0.16
LMNA-220ENST00000504687 SLC5A1P13866 664 aa16.04■□□□□ 0.16
LMNA-220ENST00000504687 NMIQ13287 307 aaPredicted RBP16.04■□□□□ 0.16
LMNA-220ENST00000504687 GORABQ5T7V8 394 aa16.04■□□□□ 0.16
LMNA-220ENST00000504687 ERICH6Q7L0X2 663 aa16.04■□□□□ 0.16
LMNA-220ENST00000504687 DEFB132Q7Z7B7 95 aa16.04■□□□□ 0.16
LMNA-220ENST00000504687 MAP4K1Q92918 833 aa16.04■□□□□ 0.16
LMNA-220ENST00000504687 HELLSQ9NRZ9 838 aa16.04■□□□□ 0.16
LMNA-220ENST00000504687 APBA3O96018 575 aa16.03■□□□□ 0.16
LMNA-220ENST00000504687 ADORA1P30542 326 aa16.03■□□□□ 0.16
LMNA-220ENST00000504687 MCM2P49736 904 aa16.03■□□□□ 0.16
LMNA-220ENST00000504687 UBE4AQ14139 1066 aa16.03■□□□□ 0.16
LMNA-220ENST00000504687 BICDL1Q6ZP65 573 aa16.03■□□□□ 0.16
LMNA-220ENST00000504687 SMIM5Q71RC9 77 aa16.03■□□□□ 0.16
LMNA-220ENST00000504687 PHF14O94880 888 aa16.02■□□□□ 0.16
LMNA-220ENST00000504687 SF3B2Q13435 895 aaKnown RBP16.02■□□□□ 0.16
LMNA-220ENST00000504687 NECTIN1Q15223 517 aa16.02■□□□□ 0.16
LMNA-220ENST00000504687 TTF1Q15361 905 aaPredicted RBP16.02■□□□□ 0.16
LMNA-220ENST00000504687 C3orf67Q6ZVT6 689 aa16.02■□□□□ 0.16
LMNA-220ENST00000504687 FAM227BQ96M60 508 aa16.02■□□□□ 0.16
LMNA-220ENST00000504687 DNAJC2Q99543 621 aaKnown RBP16.02■□□□□ 0.16
LMNA-220ENST00000504687 ZNF804BA4D1E1 1349 aa16.01■□□□□ 0.15
LMNA-220ENST00000504687 A0A0D9SFI3 127 aa16.01■□□□□ 0.15
LMNA-220ENST00000504687 KLRG2A4D1S0 409 aaPredicted RBP16.01■□□□□ 0.15
LMNA-220ENST00000504687 K7ELQ4 463 aaPredicted RBP16.01■□□□□ 0.15
LMNA-220ENST00000504687 GOLIM4O00461 696 aa16.01■□□□□ 0.15
LMNA-220ENST00000504687 ST18O60284 1047 aa16.01■□□□□ 0.15
LMNA-220ENST00000504687 RPS8P62241 208 aaKnown RBP16.01■□□□□ 0.15
LMNA-220ENST00000504687 EN1Q05925 392 aaPredicted RBP16.01■□□□□ 0.15
LMNA-220ENST00000504687 CHRNDQ07001 517 aa16.01■□□□□ 0.15
LMNA-220ENST00000504687 TSGA10IPQ3SY00 556 aa16.01■□□□□ 0.15
LMNA-220ENST00000504687 CRY2Q49AN0 593 aa16.01■□□□□ 0.15
LMNA-220ENST00000504687 MCMDC2Q4G0Z9 681 aa16.01■□□□□ 0.15
LMNA-220ENST00000504687 ZMYM1Q5SVZ6 1142 aa16.01■□□□□ 0.15
LMNA-220ENST00000504687 CCDC102BQ68D86 513 aa16.01■□□□□ 0.15
LMNA-220ENST00000504687 CNBD1Q8NA66 436 aa16.01■□□□□ 0.15
LMNA-220ENST00000504687 TM6SF1Q9BZW5 370 aa16.01■□□□□ 0.15
LMNA-220ENST00000504687 TAF1P21675 1872 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms