RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 RFC4P35249 363 aa5.09□□□□□ -1.59
USP46-205ENST00000504078 TGFB2P61812 414 aa5.09□□□□□ -1.59
USP46-205ENST00000504078 GRIPAP1Q4V328 841 aa5.09□□□□□ -1.59
USP46-205ENST00000504078 CCDC24Q8N4L8 307 aa5.09□□□□□ -1.59
USP46-205ENST00000504078 RDH13Q8NBN7 331 aa5.09□□□□□ -1.59
USP46-205ENST00000504078 ANKRD31Q8N7Z5 1873 aa5.09□□□□□ -1.6
USP46-205ENST00000504078 SCN7AQ01118 1682 aa5.08□□□□□ -1.6
USP46-205ENST00000504078 CNTNAP4Q9C0A0 1308 aa5.08□□□□□ -1.6
USP46-205ENST00000504078 USP42Q9H9J4 1324 aaKnown RBP5.08□□□□□ -1.6
USP46-205ENST00000504078 ST20-MTHFSA0A0A6YYL1 179 aa5.08□□□□□ -1.6
USP46-205ENST00000504078 NFKBIEO00221 500 aa5.08□□□□□ -1.6
USP46-205ENST00000504078 FYB1O15117 783 aa5.08□□□□□ -1.6
USP46-205ENST00000504078 BMP1P13497 986 aa5.08□□□□□ -1.6
USP46-205ENST00000504078 TNNT2P45379 298 aaPredicted RBP5.08□□□□□ -1.6
USP46-205ENST00000504078 CRKLP46109 303 aaKnown RBP5.08□□□□□ -1.6
USP46-205ENST00000504078 Q3C1V9 767 aa5.08□□□□□ -1.6
USP46-205ENST00000504078 TRAPPC3LQ5T215 181 aa5.08□□□□□ -1.6
USP46-205ENST00000504078 PIM2Q9P1W9 311 aa5.08□□□□□ -1.6
USP46-205ENST00000504078 DAXXQ9UER7 740 aaPredicted RBP5.08□□□□□ -1.6
USP46-205ENST00000504078 NRXN2Q9P2S2 1712 aa5.08□□□□□ -1.6
USP46-205ENST00000504078 ZNF831Q5JPB2 1677 aa5.08□□□□□ -1.6
USP46-205ENST00000504078 CNTNAP1P78357 1384 aa5.07□□□□□ -1.6
USP46-205ENST00000504078 TONSLQ96HA7 1378 aa5.07□□□□□ -1.6
USP46-205ENST00000504078 POLRMTO00411 1230 aaKnown RBP5.07□□□□□ -1.6
USP46-205ENST00000504078 GCGRP47871 477 aa5.07□□□□□ -1.6
USP46-205ENST00000504078 LBX1P52954 281 aa5.07□□□□□ -1.6
USP46-205ENST00000504078 SKOR1P84550 965 aa5.07□□□□□ -1.6
USP46-205ENST00000504078 GRM1Q13255 1194 aa5.07□□□□□ -1.6
USP46-205ENST00000504078 NLGN1Q8N2Q7 840 aa5.07□□□□□ -1.6
USP46-205ENST00000504078 ZFP42Q96MM3 310 aa5.07□□□□□ -1.6
USP46-205ENST00000504078 TESK2Q96S53 571 aa5.07□□□□□ -1.6
USP46-205ENST00000504078 SPG7Q9UQ90 795 aa5.07□□□□□ -1.6
USP46-205ENST00000504078 COL15A1P39059 1388 aa5.06□□□□□ -1.6
USP46-205ENST00000504078 GLTPD2A6NH11 291 aa5.06□□□□□ -1.6
USP46-205ENST00000504078 RPS6KA4O75676 772 aa5.06□□□□□ -1.6
USP46-205ENST00000504078 LMNB1P20700 586 aa5.06□□□□□ -1.6
USP46-205ENST00000504078 FOXK2Q01167 660 aa5.06□□□□□ -1.6
USP46-205ENST00000504078 XP32Q5T750 250 aa5.06□□□□□ -1.6
USP46-205ENST00000504078 USPL1Q5W0Q7 1092 aa5.06□□□□□ -1.6
USP46-205ENST00000504078 ZNF530Q6P9A1 599 aaPredicted RBP5.06□□□□□ -1.6
USP46-205ENST00000504078 BICDL1Q6ZP65 573 aa5.06□□□□□ -1.6
USP46-205ENST00000504078 METTL3Q86U44 580 aaKnown RBP5.06□□□□□ -1.6
USP46-205ENST00000504078 AEBP1Q8IUX7 1158 aa5.06□□□□□ -1.6
USP46-205ENST00000504078 SULF1Q8IWU6 871 aa5.06□□□□□ -1.6
USP46-205ENST00000504078 KCNV2Q8TDN2 545 aa5.06□□□□□ -1.6
USP46-205ENST00000504078 AIDAQ96BJ3 306 aa5.06□□□□□ -1.6
USP46-205ENST00000504078 POLR3GLQ9BT43 218 aa5.06□□□□□ -1.6
USP46-205ENST00000504078 WASF2Q9Y6W5 498 aa5.06□□□□□ -1.6
USP46-205ENST00000504078 VIRMAQ69YN4 1812 aaKnown RBP5.06□□□□□ -1.6
USP46-205ENST00000504078 LTBP1Q14766 1721 aa5.06□□□□□ -1.6
USP46-205ENST00000504078 THSD7BQ9C0I4 1608 aa5.05□□□□□ -1.6
USP46-205ENST00000504078 CCDC85CA6NKD9 419 aa5.05□□□□□ -1.6
USP46-205ENST00000504078 SIAH2O43255 324 aa5.05□□□□□ -1.6
USP46-205ENST00000504078 C21orf2O43822 256 aa5.05□□□□□ -1.6
USP46-205ENST00000504078 DXOO77932 396 aaKnown RBP5.05□□□□□ -1.6
USP46-205ENST00000504078 DDNO94850 711 aaPredicted RBP5.05□□□□□ -1.6
USP46-205ENST00000504078 HSPA8P11142 646 aaKnown RBP5.05□□□□□ -1.6
USP46-205ENST00000504078 VEGFAP15692 232 aaPredicted RBP5.05□□□□□ -1.6
USP46-205ENST00000504078 CABP4P57796 275 aa5.05□□□□□ -1.6
USP46-205ENST00000504078 EIF4A2Q14240 407 aaKnown RBP5.05□□□□□ -1.6
USP46-205ENST00000504078 HIC1Q14526 733 aa5.05□□□□□ -1.6
USP46-205ENST00000504078 NFIXQ14938 502 aa5.05□□□□□ -1.6
USP46-205ENST00000504078 EAPPQ56P03 285 aaPredicted RBP5.05□□□□□ -1.6
USP46-205ENST00000504078 RNF19BQ6ZMZ0 732 aa5.05□□□□□ -1.6
USP46-205ENST00000504078 C2CD5Q86YS7 1000 aa5.05□□□□□ -1.6
USP46-205ENST00000504078 DNAJC10Q8IXB1 793 aa5.05□□□□□ -1.6
USP46-205ENST00000504078 IFNL2Q8IZJ0 200 aa5.05□□□□□ -1.6
USP46-205ENST00000504078 ABHD8Q96I13 439 aa5.05□□□□□ -1.6
USP46-205ENST00000504078 ZNF330Q9Y3S2 320 aaPredicted RBP5.05□□□□□ -1.6
USP46-205ENST00000504078 DNMT3AQ9Y6K1 912 aaPredicted RBP5.05□□□□□ -1.6
USP46-205ENST00000504078 SCN11AQ9UI33 1791 aa5.05□□□□□ -1.6
USP46-205ENST00000504078 FER1L6Q2WGJ9 1857 aa5.05□□□□□ -1.6
USP46-205ENST00000504078 SOS1Q07889 1333 aaPredicted RBP5.04□□□□□ -1.6
USP46-205ENST00000504078 ZNF541Q9H0D2 1346 aa5.04□□□□□ -1.6
USP46-205ENST00000504078 DDX11L8A8MPP1 907 aa5.04□□□□□ -1.6
USP46-205ENST00000504078 CTCFP49711 727 aaPredicted RBP5.04□□□□□ -1.6
USP46-205ENST00000504078 FMR1Q06787 632 aaKnown RBP eCLIP5.04□□□□□ -1.6
USP46-205ENST00000504078 SCARF1Q14162 830 aa5.04□□□□□ -1.6
USP46-205ENST00000504078 ERFEQ4G0M1 354 aa5.04□□□□□ -1.6
USP46-205ENST00000504078 SLC51AQ86UW1 340 aa5.04□□□□□ -1.6
USP46-205ENST00000504078 ZNF622Q969S3 477 aaKnown RBP eCLIP5.04□□□□□ -1.6
USP46-205ENST00000504078 CARD14Q9BXL6 1004 aa5.04□□□□□ -1.6
USP46-205ENST00000504078 ADAMTS8Q9UP79 889 aa5.04□□□□□ -1.6
USP46-205ENST00000504078 ZBTB1Q9Y2K1 713 aa5.04□□□□□ -1.6
USP46-205ENST00000504078 BCORQ6W2J9 1755 aa5.04□□□□□ -1.6
USP46-205ENST00000504078 ADAMTSL1Q8N6G6 1762 aa5.04□□□□□ -1.6
USP46-205ENST00000504078 ARFGEF2Q9Y6D5 1785 aa5.04□□□□□ -1.6
USP46-205ENST00000504078 DICER1Q9UPY3 1922 aaKnown RBP5.03□□□□□ -1.6
USP46-205ENST00000504078 MRC1P22897 1456 aa5.03□□□□□ -1.6
USP46-205ENST00000504078 SLX4Q8IY92 1834 aa5.03□□□□□ -1.6
USP46-205ENST00000504078 SLC39A6Q13433 755 aa5.03□□□□□ -1.6
USP46-205ENST00000504078 INTS5Q6P9B9 1019 aaKnown RBP5.03□□□□□ -1.6
USP46-205ENST00000504078 OLFM4Q6UX06 510 aa5.03□□□□□ -1.6
USP46-205ENST00000504078 TTLL6Q8N841 843 aa5.03□□□□□ -1.6
USP46-205ENST00000504078 USB1Q9BQ65 265 aaKnown RBP5.03□□□□□ -1.6
USP46-205ENST00000504078 KIF24Q5T7B8 1368 aa5.03□□□□□ -1.6
USP46-205ENST00000504078 COL4A5P29400 1685 aa5.02□□□□□ -1.61
USP46-205ENST00000504078 RNF123Q5XPI4 1314 aa5.02□□□□□ -1.61
USP46-205ENST00000504078 ZC3H4Q9UPT8 1303 aaKnown RBP5.02□□□□□ -1.61
USP46-205ENST00000504078 UBR2Q8IWV8 1755 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms