RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 HFE2Q6ZVN8 426 aa10.32□□□□□ -0.76
NIPBL-203ENST00000503274 ASB16Q96NS5 453 aa10.32□□□□□ -0.76
NIPBL-203ENST00000503274 NIF3L1Q9GZT8 377 aa10.32□□□□□ -0.76
NIPBL-203ENST00000503274 CHRDQ9H2X0 955 aa10.32□□□□□ -0.76
NIPBL-203ENST00000503274 CPB1P15086 417 aa10.31□□□□□ -0.76
NIPBL-203ENST00000503274 CCDC27Q2M243 656 aa10.31□□□□□ -0.76
NIPBL-203ENST00000503274 KANK3Q6NY19 840 aa10.31□□□□□ -0.76
NIPBL-203ENST00000503274 ALKBH8Q96BT7 664 aaKnown RBP10.31□□□□□ -0.76
NIPBL-203ENST00000503274 STARD13Q9Y3M8 1113 aa10.31□□□□□ -0.76
NIPBL-203ENST00000503274 J3QW42 95 aa10.3□□□□□ -0.76
NIPBL-203ENST00000503274 COL13A1Q5TAT6 717 aaPredicted RBP10.3□□□□□ -0.76
NIPBL-203ENST00000503274 TMEM151AQ8N4L1 468 aa10.3□□□□□ -0.76
NIPBL-203ENST00000503274 ZFYVE28Q9HCC9 887 aa10.3□□□□□ -0.76
NIPBL-203ENST00000503274 KANSL3Q9P2N6 904 aa10.3□□□□□ -0.76
NIPBL-203ENST00000503274 NAGPAQ9UK23 515 aa10.3□□□□□ -0.76
NIPBL-203ENST00000503274 EREGO14944 169 aa10.29□□□□□ -0.76
NIPBL-203ENST00000503274 KIF4AO95239 1232 aa10.29□□□□□ -0.76
NIPBL-203ENST00000503274 PLCB3Q01970 1234 aa10.29□□□□□ -0.76
NIPBL-203ENST00000503274 PSAPL1Q6NUJ1 521 aa10.29□□□□□ -0.76
NIPBL-203ENST00000503274 NCAPG2Q86XI2 1143 aa10.29□□□□□ -0.76
NIPBL-203ENST00000503274 SPACA7Q96KW9 195 aa10.29□□□□□ -0.76
NIPBL-203ENST00000503274 RRAGCQ9HB90 399 aa10.29□□□□□ -0.76
NIPBL-203ENST00000503274 RNF225M0QZC1 329 aaPredicted RBP10.28□□□□□ -0.76
NIPBL-203ENST00000503274 TREHO43280 583 aa10.28□□□□□ -0.76
NIPBL-203ENST00000503274 GHRHP01286 108 aa10.28□□□□□ -0.76
NIPBL-203ENST00000503274 EIF2AK2P19525 551 aaKnown RBP10.28□□□□□ -0.76
NIPBL-203ENST00000503274 ORC1Q13415 861 aa10.28□□□□□ -0.76
NIPBL-203ENST00000503274 DSC3Q14574 896 aa10.28□□□□□ -0.76
NIPBL-203ENST00000503274 PERM1Q5SV97 790 aa10.28□□□□□ -0.76
NIPBL-203ENST00000503274 ELMSAN1Q6PJG2 1045 aa10.28□□□□□ -0.76
NIPBL-203ENST00000503274 C20orf204Q6ZNR8 217 aa10.28□□□□□ -0.76
NIPBL-203ENST00000503274 RBSNQ9H1K0 784 aa10.28□□□□□ -0.76
NIPBL-203ENST00000503274 FRRS1LQ9P0K9 344 aa10.28□□□□□ -0.76
NIPBL-203ENST00000503274 SALL4Q9UJQ4 1053 aa10.28□□□□□ -0.76
NIPBL-203ENST00000503274 GDF11O95390 407 aa10.27□□□□□ -0.77
NIPBL-203ENST00000503274 ALBP02768 609 aa10.27□□□□□ -0.77
NIPBL-203ENST00000503274 TMCO4Q5TGY1 634 aa10.27□□□□□ -0.77
NIPBL-203ENST00000503274 MICALL1Q8N3F8 863 aa10.27□□□□□ -0.77
NIPBL-203ENST00000503274 NUDT8Q8WV74 236 aa10.27□□□□□ -0.77
NIPBL-203ENST00000503274 AMOTL2Q9Y2J4 779 aa10.27□□□□□ -0.77
NIPBL-203ENST00000503274 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.27□□□□□ -0.77
NIPBL-203ENST00000503274 LOC100996750A0A140TA64 210 aa10.26□□□□□ -0.77
NIPBL-203ENST00000503274 M0R082 166 aa10.26□□□□□ -0.77
NIPBL-203ENST00000503274 CPNE3O75131 537 aaKnown RBP10.26□□□□□ -0.77
NIPBL-203ENST00000503274 RGS9O75916 674 aaPredicted RBP10.26□□□□□ -0.77
NIPBL-203ENST00000503274 HOXB4P17483 251 aaPredicted RBP10.26□□□□□ -0.77
NIPBL-203ENST00000503274 RASSF7Q02833 373 aa10.26□□□□□ -0.77
NIPBL-203ENST00000503274 SUZ12Q15022 739 aaKnown RBP10.26□□□□□ -0.77
NIPBL-203ENST00000503274 ZNF417Q8TAU3 575 aa10.26□□□□□ -0.77
NIPBL-203ENST00000503274 ZNF587Q96SQ5 575 aaPredicted RBP10.26□□□□□ -0.77
NIPBL-203ENST00000503274 LPIN3Q9BQK8 851 aa10.26□□□□□ -0.77
NIPBL-203ENST00000503274 KRTAP4-6Q9BYQ5 205 aa10.26□□□□□ -0.77
NIPBL-203ENST00000503274 DNAJC25Q9H1X3 360 aa10.26□□□□□ -0.77
NIPBL-203ENST00000503274 EIF1AYO14602 144 aaKnown RBP10.25□□□□□ -0.77
NIPBL-203ENST00000503274 EDN3P14138 238 aa10.25□□□□□ -0.77
NIPBL-203ENST00000503274 DGKGP49619 791 aa10.25□□□□□ -0.77
NIPBL-203ENST00000503274 CEP120Q8N960 986 aa10.25□□□□□ -0.77
NIPBL-203ENST00000503274 PLD4Q96BZ4 506 aa10.25□□□□□ -0.77
NIPBL-203ENST00000503274 CSRNP1Q96S65 589 aa10.25□□□□□ -0.77
NIPBL-203ENST00000503274 SMG9Q9H0W8 520 aaKnown RBP10.25□□□□□ -0.77
NIPBL-203ENST00000503274 JPH1Q9HDC5 661 aaPredicted RBP10.25□□□□□ -0.77
NIPBL-203ENST00000503274 NISCHQ9Y2I1 1504 aa10.24□□□□□ -0.77
NIPBL-203ENST00000503274 ANKRD33BA6NCL7 494 aa10.24□□□□□ -0.77
NIPBL-203ENST00000503274 LILRB5O75023 590 aa10.24□□□□□ -0.77
NIPBL-203ENST00000503274 SNRPNP63162 240 aaKnown RBP10.24□□□□□ -0.77
NIPBL-203ENST00000503274 USPL1Q5W0Q7 1092 aa10.24□□□□□ -0.77
NIPBL-203ENST00000503274 DNAJC14Q6Y2X3 702 aaPredicted RBP10.24□□□□□ -0.77
NIPBL-203ENST00000503274 TTC9Q92623 222 aa10.24□□□□□ -0.77
NIPBL-203ENST00000503274 PRDM6Q9NQX0 595 aa10.24□□□□□ -0.77
NIPBL-203ENST00000503274 POLR3DP05423 398 aaPredicted RBP10.23□□□□□ -0.77
NIPBL-203ENST00000503274 C8orf86Q6ZUL3 223 aa10.23□□□□□ -0.77
NIPBL-203ENST00000503274 FMR1Q06787 632 aaKnown RBP eCLIP10.22□□□□□ -0.77
NIPBL-203ENST00000503274 PODNQ7Z5L7 613 aa10.22□□□□□ -0.77
NIPBL-203ENST00000503274 GALNT12Q8IXK2 581 aa10.22□□□□□ -0.77
NIPBL-203ENST00000503274 BEND7Q8N7W2 519 aaPredicted RBP10.22□□□□□ -0.77
NIPBL-203ENST00000503274 MKL2Q9ULH7 1088 aa10.22□□□□□ -0.77
NIPBL-203ENST00000503274 MAPK8P45983 427 aa10.21□□□□□ -0.77
NIPBL-203ENST00000503274 ATP11AP98196 1134 aa10.21□□□□□ -0.77
NIPBL-203ENST00000503274 LINC00114Q6XXX2 140 aa10.21□□□□□ -0.77
NIPBL-203ENST00000503274 PBX4Q9BYU1 374 aa10.21□□□□□ -0.77
NIPBL-203ENST00000503274 RASSF4Q9H2L5 321 aa10.21□□□□□ -0.77
NIPBL-203ENST00000503274 PNMA6FA0A0J9YX94 578 aa10.2□□□□□ -0.78
NIPBL-203ENST00000503274 SMNDC1O75940 238 aaKnown RBP eCLIP10.2□□□□□ -0.78
NIPBL-203ENST00000503274 ACPPP15309 386 aa10.2□□□□□ -0.78
NIPBL-203ENST00000503274 ERCC3P19447 782 aa10.2□□□□□ -0.78
NIPBL-203ENST00000503274 IRS1P35568 1242 aa10.2□□□□□ -0.78
NIPBL-203ENST00000503274 AFF1P51825 1210 aaKnown RBP10.2□□□□□ -0.78
NIPBL-203ENST00000503274 ENOX2Q16206 610 aaKnown RBP10.2□□□□□ -0.78
NIPBL-203ENST00000503274 CEP135Q66GS9 1140 aa10.2□□□□□ -0.78
NIPBL-203ENST00000503274 CNTNAP5Q8WYK1 1306 aa10.2□□□□□ -0.78
NIPBL-203ENST00000503274 CCDC74AQ96AQ1 378 aa10.2□□□□□ -0.78
NIPBL-203ENST00000503274 SCARF2Q96GP6 870 aaPredicted RBP10.2□□□□□ -0.78
NIPBL-203ENST00000503274 DZANK1Q9NVP4 752 aa10.2□□□□□ -0.78
NIPBL-203ENST00000503274 PIK3R2O00459 728 aa10.19□□□□□ -0.78
NIPBL-203ENST00000503274 COL9A3Q14050 684 aaPredicted RBP10.19□□□□□ -0.78
NIPBL-203ENST00000503274 COL19A1Q14993 1142 aa10.19□□□□□ -0.78
NIPBL-203ENST00000503274 GRIK5Q16478 980 aa10.19□□□□□ -0.78
NIPBL-203ENST00000503274 PEAR1Q5VY43 1037 aaPredicted RBP10.19□□□□□ -0.78
NIPBL-203ENST00000503274 OSMRQ99650 979 aa10.19□□□□□ -0.78
NIPBL-203ENST00000503274 LATS2Q9NRM7 1088 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms