RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 PDGFDQ9GZP0 370 aaPredicted RBP12.94□□□□□ -0.34
AC055717.1-201ENST00000502221 ZSWIM6Q9HCJ5 1215 aa12.94□□□□□ -0.34
AC055717.1-201ENST00000502221 PDRG1Q9NUG6 133 aa12.94□□□□□ -0.34
AC055717.1-201ENST00000502221 IMPACTQ9P2X3 320 aa12.94□□□□□ -0.34
AC055717.1-201ENST00000502221 EXOC6BQ9Y2D4 811 aa12.94□□□□□ -0.34
AC055717.1-201ENST00000502221 V9GYY5 206 aaPredicted RBP12.94□□□□□ -0.34
AC055717.1-201ENST00000502221 GPS2Q13227 327 aa12.94□□□□□ -0.34
AC055717.1-201ENST00000502221 LUZP1Q86V48 1076 aa12.94□□□□□ -0.34
AC055717.1-201ENST00000502221 TXLNBQ8N3L3 684 aa12.94□□□□□ -0.34
AC055717.1-201ENST00000502221 IP6K1Q92551 441 aa12.94□□□□□ -0.34
AC055717.1-201ENST00000502221 SRRTQ9BXP5 876 aaKnown RBP12.94□□□□□ -0.34
AC055717.1-201ENST00000502221 CHMP4AQ9BY43 222 aa12.94□□□□□ -0.34
AC055717.1-201ENST00000502221 DOT1LQ8TEK3 1739 aa12.94□□□□□ -0.34
AC055717.1-201ENST00000502221 TTC41PQ6P2S7 1318 aa12.93□□□□□ -0.34
AC055717.1-201ENST00000502221 IGSF3O75054 1194 aa12.93□□□□□ -0.34
AC055717.1-201ENST00000502221 IL2RBP14784 551 aa12.93□□□□□ -0.34
AC055717.1-201ENST00000502221 ZKSCAN1P17029 563 aaPredicted RBP12.93□□□□□ -0.34
AC055717.1-201ENST00000502221 LARP1BQ659C4 914 aaKnown RBP12.93□□□□□ -0.34
AC055717.1-201ENST00000502221 FILIP1Q7Z7B0 1213 aa12.93□□□□□ -0.34
AC055717.1-201ENST00000502221 CACTINQ8WUQ7 758 aaKnown RBP12.93□□□□□ -0.34
AC055717.1-201ENST00000502221 USP42Q9H9J4 1324 aaKnown RBP12.93□□□□□ -0.34
AC055717.1-201ENST00000502221 PAPPAQ13219 1627 aa12.93□□□□□ -0.34
AC055717.1-201ENST00000502221 H2AFXP16104 143 aaPredicted RBP12.92□□□□□ -0.34
AC055717.1-201ENST00000502221 EIF4A2Q14240 407 aaKnown RBP12.92□□□□□ -0.34
AC055717.1-201ENST00000502221 NBPF14Q5TI25 921 aa12.92□□□□□ -0.34
AC055717.1-201ENST00000502221 L2HGDHQ9H9P8 463 aa12.92□□□□□ -0.34
AC055717.1-201ENST00000502221 ZNF215Q9UL58 517 aaPredicted RBP12.92□□□□□ -0.34
AC055717.1-201ENST00000502221 FLT4P35916 1363 aa12.92□□□□□ -0.34
AC055717.1-201ENST00000502221 MAP3K5Q99683 1374 aa12.92□□□□□ -0.34
AC055717.1-201ENST00000502221 N4BP2Q86UW6 1770 aaPredicted RBP12.92□□□□□ -0.34
AC055717.1-201ENST00000502221 HIP1O00291 1037 aa12.92□□□□□ -0.34
AC055717.1-201ENST00000502221 LRMPQ12912 555 aa12.92□□□□□ -0.34
AC055717.1-201ENST00000502221 MUM1L1Q5H9M0 696 aa12.92□□□□□ -0.34
AC055717.1-201ENST00000502221 CTR9Q6PD62 1173 aa12.92□□□□□ -0.34
AC055717.1-201ENST00000502221 TTC6Q86TZ1 520 aa12.92□□□□□ -0.34
AC055717.1-201ENST00000502221 SSH3Q8TE77 659 aa12.92□□□□□ -0.34
AC055717.1-201ENST00000502221 SPATA32Q96LK8 384 aa12.92□□□□□ -0.34
AC055717.1-201ENST00000502221 EFCC1Q9HA90 598 aa12.92□□□□□ -0.34
AC055717.1-201ENST00000502221 VPS37CA5D8V6 355 aaPredicted RBP12.91□□□□□ -0.34
AC055717.1-201ENST00000502221 SKILP12757 684 aa12.91□□□□□ -0.34
AC055717.1-201ENST00000502221 CASTP20810 708 aaKnown RBP12.91□□□□□ -0.34
AC055717.1-201ENST00000502221 CCDC30Q5VVM6 783 aa12.91□□□□□ -0.34
AC055717.1-201ENST00000502221 CCAR2Q8N163 923 aaKnown RBP12.91□□□□□ -0.34
AC055717.1-201ENST00000502221 BABAM1Q9NWV8 329 aa12.91□□□□□ -0.34
AC055717.1-201ENST00000502221 DACT1Q9NYF0 836 aa12.91□□□□□ -0.34
AC055717.1-201ENST00000502221 CFAP45Q9UL16 551 aa12.91□□□□□ -0.34
AC055717.1-201ENST00000502221 MEGF6O75095 1541 aa12.91□□□□□ -0.34
AC055717.1-201ENST00000502221 TXNRD1Q16881 649 aa12.9□□□□□ -0.34
AC055717.1-201ENST00000502221 KRT24Q2M2I5 525 aa12.9□□□□□ -0.34
AC055717.1-201ENST00000502221 ATL3Q6DD88 541 aa12.9□□□□□ -0.34
AC055717.1-201ENST00000502221 FBXO38Q6PIJ6 1188 aa12.9□□□□□ -0.34
AC055717.1-201ENST00000502221 SLC4A10Q6U841 1118 aa12.9□□□□□ -0.34
AC055717.1-201ENST00000502221 CCDC83Q8IWF9 413 aa12.9□□□□□ -0.34
AC055717.1-201ENST00000502221 USHBP1Q8N6Y0 703 aa12.9□□□□□ -0.34
AC055717.1-201ENST00000502221 ZNF592Q92610 1267 aa12.9□□□□□ -0.34
AC055717.1-201ENST00000502221 NAT10Q9H0A0 1025 aaKnown RBP12.9□□□□□ -0.34
AC055717.1-201ENST00000502221 ZSCAN16Q9H4T2 348 aaPredicted RBP12.9□□□□□ -0.34
AC055717.1-201ENST00000502221 CWC15Q9P013 229 aaKnown RBP12.9□□□□□ -0.34
AC055717.1-201ENST00000502221 CACNA1FO60840 1977 aa12.9□□□□□ -0.34
AC055717.1-201ENST00000502221 GLRX3O76003 335 aaKnown RBP12.9□□□□□ -0.34
AC055717.1-201ENST00000502221 STX1AQ16623 288 aa12.9□□□□□ -0.34
AC055717.1-201ENST00000502221 CCDC150Q8NCX0 1101 aa12.89□□□□□ -0.35
AC055717.1-201ENST00000502221 LIG1P18858 919 aa12.89□□□□□ -0.35
AC055717.1-201ENST00000502221 PI4K2BQ8TCG2 481 aa12.89□□□□□ -0.35
AC055717.1-201ENST00000502221 GPATCH3Q96I76 525 aa12.89□□□□□ -0.35
AC055717.1-201ENST00000502221 OSBPL5Q9H0X9 879 aaPredicted RBP12.89□□□□□ -0.35
AC055717.1-201ENST00000502221 ANO10Q9NW15 660 aa12.89□□□□□ -0.35
AC055717.1-201ENST00000502221 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.89□□□□□ -0.35
AC055717.1-201ENST00000502221 NRBP1Q9UHY1 535 aa12.89□□□□□ -0.35
AC055717.1-201ENST00000502221 HDAC5Q9UQL6 1122 aa12.89□□□□□ -0.35
AC055717.1-201ENST00000502221 BECN2A8MW95 431 aa12.88□□□□□ -0.35
AC055717.1-201ENST00000502221 POLA2Q14181 598 aa12.88□□□□□ -0.35
AC055717.1-201ENST00000502221 DCTN1Q14203 1278 aa12.88□□□□□ -0.35
AC055717.1-201ENST00000502221 IQCB1Q15051 598 aa12.88□□□□□ -0.35
AC055717.1-201ENST00000502221 NBPF6Q5VWK0 638 aa12.88□□□□□ -0.35
AC055717.1-201ENST00000502221 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
AC055717.1-201ENST00000502221 LEO1Q8WVC0 666 aaPredicted RBP12.88□□□□□ -0.35
AC055717.1-201ENST00000502221 NBPF4Q96M43 638 aa12.88□□□□□ -0.35
AC055717.1-201ENST00000502221 EYA1Q99502 592 aa12.88□□□□□ -0.35
AC055717.1-201ENST00000502221 LY75O60449 1722 aa12.87□□□□□ -0.35
AC055717.1-201ENST00000502221 PNMA6EA0A0J9YXQ4 647 aa12.87□□□□□ -0.35
AC055717.1-201ENST00000502221 UBTFL1P0CB47 393 aaPredicted RBP12.87□□□□□ -0.35
AC055717.1-201ENST00000502221 ELF2Q15723 593 aa12.87□□□□□ -0.35
AC055717.1-201ENST00000502221 TAF7LQ5H9L4 462 aa12.87□□□□□ -0.35
AC055717.1-201ENST00000502221 TMCO3Q6UWJ1 677 aa12.87□□□□□ -0.35
AC055717.1-201ENST00000502221 CHMP4CQ96CF2 233 aa12.87□□□□□ -0.35
AC055717.1-201ENST00000502221 JAKMIP1Q96N16 626 aaKnown RBP12.87□□□□□ -0.35
AC055717.1-201ENST00000502221 CCDC69A6NI79 296 aa12.87□□□□□ -0.35
AC055717.1-201ENST00000502221 SNW1Q13573 536 aaKnown RBP12.87□□□□□ -0.35
AC055717.1-201ENST00000502221 CAMK4Q16566 473 aa12.87□□□□□ -0.35
AC055717.1-201ENST00000502221 CCDC93Q567U6 631 aa12.87□□□□□ -0.35
AC055717.1-201ENST00000502221 TSHZ3Q63HK5 1081 aa12.87□□□□□ -0.35
AC055717.1-201ENST00000502221 CKAP2LQ8IYA6 745 aa12.87□□□□□ -0.35
AC055717.1-201ENST00000502221 RHPN1Q8TCX5 695 aa12.87□□□□□ -0.35
AC055717.1-201ENST00000502221 BICD2Q8TD16 824 aa12.87□□□□□ -0.35
AC055717.1-201ENST00000502221 DDX54Q8TDD1 881 aaKnown RBP12.87□□□□□ -0.35
AC055717.1-201ENST00000502221 CCZ1BP86790 482 aa12.86□□□□□ -0.35
AC055717.1-201ENST00000502221 CCZ1P86791 482 aaPredicted RBP12.86□□□□□ -0.35
AC055717.1-201ENST00000502221 FLIIQ13045 1269 aa12.86□□□□□ -0.35
AC055717.1-201ENST00000502221 CCDC144BQ3MJ40 725 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms