RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 HIRAP54198 1017 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-207ENST00000498698 BEND3Q5T5X7 828 aa12.08□□□□□ -0.48
HMGCL-207ENST00000498698 DPF2Q92785 391 aa12.08□□□□□ -0.48
HMGCL-207ENST00000498698 BCL2L13Q9BXK5 485 aa12.08□□□□□ -0.48
HMGCL-207ENST00000498698 ZC3H12CQ9C0D7 883 aaKnown RBP12.08□□□□□ -0.48
HMGCL-207ENST00000498698 KCNQ5Q9NR82 932 aa12.08□□□□□ -0.48
HMGCL-207ENST00000498698 BSDC1Q9NW68 430 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-207ENST00000498698 MKRN1Q9UHC7 482 aaKnown RBP12.08□□□□□ -0.48
HMGCL-207ENST00000498698 PGAP2Q9UHJ9 254 aa12.08□□□□□ -0.48
HMGCL-207ENST00000498698 CNOT7Q9UIV1 285 aaKnown RBP12.08□□□□□ -0.48
HMGCL-207ENST00000498698 GGA1Q9UJY5 639 aa12.08□□□□□ -0.48
HMGCL-207ENST00000498698 ZBTB12Q9Y330 459 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-207ENST00000498698 DDX60Q8IY21 1712 aaKnown RBP12.08□□□□□ -0.48
HMGCL-207ENST00000498698 SCN4AP35499 1836 aa12.07□□□□□ -0.48
HMGCL-207ENST00000498698 SHTN1A0MZ66 631 aa12.07□□□□□ -0.48
HMGCL-207ENST00000498698 WTIPA6NIX2 430 aaPredicted RBP12.07□□□□□ -0.48
HMGCL-207ENST00000498698 ECE2O60344 883 aa12.07□□□□□ -0.48
HMGCL-207ENST00000498698 FMR1Q06787 632 aaKnown RBP eCLIP12.07□□□□□ -0.48
HMGCL-207ENST00000498698 LTBP1Q14766 1721 aa12.07□□□□□ -0.48
HMGCL-207ENST00000498698 MINPP1Q9UNW1 487 aa12.07□□□□□ -0.48
HMGCL-207ENST00000498698 LAMB2P55268 1798 aa12.07□□□□□ -0.48
HMGCL-207ENST00000498698 XDHP47989 1333 aa12.07□□□□□ -0.48
HMGCL-207ENST00000498698 CNTNAP1P78357 1384 aa12.06□□□□□ -0.48
HMGCL-207ENST00000498698 ADAMTSL1Q8N6G6 1762 aa12.06□□□□□ -0.48
HMGCL-207ENST00000498698 H7C1D1 291 aa12.06□□□□□ -0.48
HMGCL-207ENST00000498698 TRAF5O00463 557 aa12.06□□□□□ -0.48
HMGCL-207ENST00000498698 VIL1P09327 827 aaKnown RBP12.06□□□□□ -0.48
HMGCL-207ENST00000498698 ATP2B4P23634 1241 aa12.06□□□□□ -0.48
HMGCL-207ENST00000498698 MICALL2Q8IY33 904 aa12.06□□□□□ -0.48
HMGCL-207ENST00000498698 TRPM4Q8TD43 1214 aa12.06□□□□□ -0.48
HMGCL-207ENST00000498698 ZC3H15Q8WU90 426 aaKnown RBP12.06□□□□□ -0.48
HMGCL-207ENST00000498698 LRRC37AA6NMS7 1700 aa12.06□□□□□ -0.48
HMGCL-207ENST00000498698 ITGA6P23229 1130 aa12.05□□□□□ -0.48
HMGCL-207ENST00000498698 RPS12P25398 132 aaKnown RBP12.05□□□□□ -0.48
HMGCL-207ENST00000498698 FOXO4P98177 505 aa12.05□□□□□ -0.48
HMGCL-207ENST00000498698 FAM161AQ3B820 660 aa12.05□□□□□ -0.48
HMGCL-207ENST00000498698 CST9Q5W186 159 aa12.05□□□□□ -0.48
HMGCL-207ENST00000498698 RASSF10A6NK89 507 aa12.04□□□□□ -0.48
HMGCL-207ENST00000498698 E9PSI1 815 aa12.04□□□□□ -0.48
HMGCL-207ENST00000498698 HSPA1AP0DMV8 641 aaKnown RBP12.04□□□□□ -0.48
HMGCL-207ENST00000498698 HSPA1BP0DMV9 641 aaKnown RBP12.04□□□□□ -0.48
HMGCL-207ENST00000498698 IGHMBP2P38935 993 aaKnown RBP12.04□□□□□ -0.48
HMGCL-207ENST00000498698 VEGFBP49765 207 aa12.04□□□□□ -0.48
HMGCL-207ENST00000498698 SLFN5Q08AF3 891 aa12.04□□□□□ -0.48
HMGCL-207ENST00000498698 G3V3G9 751 aa12.03□□□□□ -0.48
HMGCL-207ENST00000498698 CCER2I3L3R5 266 aa12.03□□□□□ -0.48
HMGCL-207ENST00000498698 GRM8O00222 908 aa12.03□□□□□ -0.48
HMGCL-207ENST00000498698 ALDH1L1O75891 902 aa12.03□□□□□ -0.48
HMGCL-207ENST00000498698 EGFRP00533 1210 aa12.03□□□□□ -0.48
HMGCL-207ENST00000498698 CCT4P50991 539 aaKnown RBP12.03□□□□□ -0.48
HMGCL-207ENST00000498698 DEFB115Q30KQ5 88 aa12.03□□□□□ -0.48
HMGCL-207ENST00000498698 DCAF8Q5TAQ9 597 aa12.03□□□□□ -0.48
HMGCL-207ENST00000498698 SAMD7Q7Z3H4 446 aa12.03□□□□□ -0.48
HMGCL-207ENST00000498698 PODNQ7Z5L7 613 aa12.03□□□□□ -0.48
HMGCL-207ENST00000498698 MRPL50Q8N5N7 158 aaKnown RBP12.03□□□□□ -0.48
HMGCL-207ENST00000498698 GLIS2Q9BZE0 524 aaPredicted RBP12.03□□□□□ -0.48
HMGCL-207ENST00000498698 LEMD3Q9Y2U8 911 aa12.03□□□□□ -0.48
HMGCL-207ENST00000498698 TAF1P21675 1872 aa12.03□□□□□ -0.48
HMGCL-207ENST00000498698 TBC1D10BQ4KMP7 808 aaPredicted RBP12.02□□□□□ -0.49
HMGCL-207ENST00000498698 EPHA10Q5JZY3 1008 aa12.02□□□□□ -0.49
HMGCL-207ENST00000498698 IFFO2Q5TF58 517 aa12.02□□□□□ -0.49
HMGCL-207ENST00000498698 RSBN1LQ6PCB5 846 aaPredicted RBP12.02□□□□□ -0.49
HMGCL-207ENST00000498698 CDC37L1Q7L3B6 337 aa12.02□□□□□ -0.49
HMGCL-207ENST00000498698 CDCA7LQ96GN5 454 aa12.02□□□□□ -0.49
HMGCL-207ENST00000498698 GMLQ99445 158 aa12.02□□□□□ -0.49
HMGCL-207ENST00000498698 MPHOSPH8Q99549 860 aa12.02□□□□□ -0.49
HMGCL-207ENST00000498698 ABT1Q9ULW3 272 aaKnown RBP12.02□□□□□ -0.49
HMGCL-207ENST00000498698 MED23Q9ULK4 1368 aa12.02□□□□□ -0.49
HMGCL-207ENST00000498698 ANKRD18BA2A2Z9 1011 aa12.01□□□□□ -0.49
HMGCL-207ENST00000498698 ZNF280AP59817 542 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-207ENST00000498698 IFIT5Q13325 482 aaKnown RBP12.01□□□□□ -0.49
HMGCL-207ENST00000498698 COL13A1Q5TAT6 717 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-207ENST00000498698 SLC4A10Q6U841 1118 aa12.01□□□□□ -0.49
HMGCL-207ENST00000498698 LMBR1LQ6UX01 489 aa12.01□□□□□ -0.49
HMGCL-207ENST00000498698 TXNRD3Q86VQ6 643 aa12.01□□□□□ -0.49
HMGCL-207ENST00000498698 TRMT2AQ8IZ69 625 aaKnown RBP12.01□□□□□ -0.49
HMGCL-207ENST00000498698 AGBL3Q8NEM8 1001 aa12.01□□□□□ -0.49
HMGCL-207ENST00000498698 SSH1Q8WYL5 1049 aa12.01□□□□□ -0.49
HMGCL-207ENST00000498698 SRCIN1Q9C0H9 1055 aa12.01□□□□□ -0.49
HMGCL-207ENST00000498698 ANKRD2Q9GZV1 360 aa12.01□□□□□ -0.49
HMGCL-207ENST00000498698 USP17L3A6NCW0 530 aa12□□□□□ -0.49
HMGCL-207ENST00000498698 USP17L4A6NCW7 530 aa12□□□□□ -0.49
HMGCL-207ENST00000498698 CELF2O95319 508 aaKnown RBP12□□□□□ -0.49
HMGCL-207ENST00000498698 CHRNDQ07001 517 aa12□□□□□ -0.49
HMGCL-207ENST00000498698 RBM26Q5T8P6 1007 aaKnown RBP12□□□□□ -0.49
HMGCL-207ENST00000498698 USP17L1Q7RTZ2 530 aa12□□□□□ -0.49
HMGCL-207ENST00000498698 USP48Q86UV5 1035 aa12□□□□□ -0.49
HMGCL-207ENST00000498698 COA1Q9GZY4 146 aa12□□□□□ -0.49
HMGCL-207ENST00000498698 C9orf78Q9NZ63 289 aaPredicted RBP12□□□□□ -0.49
HMGCL-207ENST00000498698 TLL2Q9Y6L7 1015 aa12□□□□□ -0.49
HMGCL-207ENST00000498698 ZNF804BA4D1E1 1349 aa12□□□□□ -0.49
HMGCL-207ENST00000498698 ZNF609O15014 1411 aa12□□□□□ -0.49
HMGCL-207ENST00000498698 SNAP23O00161 211 aa11.99□□□□□ -0.49
HMGCL-207ENST00000498698 USP17L8P0C7I0 530 aa11.99□□□□□ -0.49
HMGCL-207ENST00000498698 KLRK1P26718 216 aa11.99□□□□□ -0.49
HMGCL-207ENST00000498698 KIF4BQ2VIQ3 1234 aa11.99□□□□□ -0.49
HMGCL-207ENST00000498698 DACT2Q5SW24 774 aa11.99□□□□□ -0.49
HMGCL-207ENST00000498698 DLK2Q6UY11 383 aa11.99□□□□□ -0.49
HMGCL-207ENST00000498698 SAPCD2Q86UD0 394 aa11.99□□□□□ -0.49
HMGCL-207ENST00000498698 KAZALD1Q96I82 304 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms