RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 DOK7Q18PE1 504 aa12.01□□□□□ -0.49
FAM3D-205ENST00000498347 SPRYD7Q5W111 196 aa12.01□□□□□ -0.49
FAM3D-205ENST00000498347 GIGYF2Q6Y7W6 1299 aaKnown RBP12.01□□□□□ -0.49
FAM3D-205ENST00000498347 IFNL1Q8IU54 200 aa12.01□□□□□ -0.49
FAM3D-205ENST00000498347 GRAPLQ8TC17 118 aaPredicted RBP12.01□□□□□ -0.49
FAM3D-205ENST00000498347 EYA3Q99504 573 aa12.01□□□□□ -0.49
FAM3D-205ENST00000498347 ZBTB3Q9H5J0 574 aa12.01□□□□□ -0.49
FAM3D-205ENST00000498347 NSFL1CQ9UNZ2 370 aaKnown RBP12.01□□□□□ -0.49
FAM3D-205ENST00000498347 ARHGEF6Q15052 776 aa12□□□□□ -0.49
FAM3D-205ENST00000498347 PRAMEF18Q5VWM3 479 aa12□□□□□ -0.49
FAM3D-205ENST00000498347 ANKRD13DQ6ZTN6 518 aa12□□□□□ -0.49
FAM3D-205ENST00000498347 ARMC9Q7Z3E5 817 aa12□□□□□ -0.49
FAM3D-205ENST00000498347 AGBL3Q8NEM8 1001 aa12□□□□□ -0.49
FAM3D-205ENST00000498347 CD99L2Q8TCZ2 262 aa12□□□□□ -0.49
FAM3D-205ENST00000498347 PRO3102Q9H379 93 aa12□□□□□ -0.49
FAM3D-205ENST00000498347 A0A1W2PPC1 479 aa11.99□□□□□ -0.49
FAM3D-205ENST00000498347 G3V3G9 751 aa11.99□□□□□ -0.49
FAM3D-205ENST00000498347 SP3Q02447 781 aa11.99□□□□□ -0.49
FAM3D-205ENST00000498347 DCAF8Q5TAQ9 597 aa11.99□□□□□ -0.49
FAM3D-205ENST00000498347 OTUD7BQ6GQQ9 843 aa11.99□□□□□ -0.49
FAM3D-205ENST00000498347 RTF1Q92541 710 aaKnown RBP11.99□□□□□ -0.49
FAM3D-205ENST00000498347 SLC10A4Q96EP9 437 aa11.99□□□□□ -0.49
FAM3D-205ENST00000498347 ZC3H12CQ9C0D7 883 aaKnown RBP11.99□□□□□ -0.49
FAM3D-205ENST00000498347 POLLQ9UGP5 575 aa11.99□□□□□ -0.49
FAM3D-205ENST00000498347 RBBP6Q7Z6E9 1792 aaKnown RBP11.98□□□□□ -0.49
FAM3D-205ENST00000498347 RTL9Q8NET4 1388 aa11.98□□□□□ -0.49
FAM3D-205ENST00000498347 WTIPA6NIX2 430 aaPredicted RBP11.98□□□□□ -0.49
FAM3D-205ENST00000498347 U2SURPO15042 1029 aaKnown RBP11.98□□□□□ -0.49
FAM3D-205ENST00000498347 USP17L8P0C7I0 530 aa11.98□□□□□ -0.49
FAM3D-205ENST00000498347 TAF7Q15545 349 aaPredicted RBP11.98□□□□□ -0.49
FAM3D-205ENST00000498347 SLC9C1Q4G0N8 1177 aa11.98□□□□□ -0.49
FAM3D-205ENST00000498347 LDLRAD1Q5T700 205 aa11.98□□□□□ -0.49
FAM3D-205ENST00000498347 COL25A1Q9BXS0 654 aaPredicted RBP11.98□□□□□ -0.49
FAM3D-205ENST00000498347 MYOZ2Q9NPC6 264 aa11.98□□□□□ -0.49
FAM3D-205ENST00000498347 NR2E3Q9Y5X4 410 aa11.98□□□□□ -0.49
FAM3D-205ENST00000498347 HCLS1P14317 486 aaPredicted RBP11.97□□□□□ -0.49
FAM3D-205ENST00000498347 MYL6BP14649 208 aa11.97□□□□□ -0.49
FAM3D-205ENST00000498347 RSBN1LQ6PCB5 846 aaPredicted RBP11.97□□□□□ -0.49
FAM3D-205ENST00000498347 PHACTR3Q96KR7 559 aa11.97□□□□□ -0.49
FAM3D-205ENST00000498347 TIMELESSQ9UNS1 1208 aa11.97□□□□□ -0.49
FAM3D-205ENST00000498347 SCAF8Q9UPN6 1271 aaKnown RBP11.97□□□□□ -0.49
FAM3D-205ENST00000498347 NUP98P52948 1817 aa11.97□□□□□ -0.49
FAM3D-205ENST00000498347 SIPA1L3O60292 1781 aaPredicted RBP11.97□□□□□ -0.49
FAM3D-205ENST00000498347 IGF2BP3O00425 579 aaKnown RBP eCLIP11.95□□□□□ -0.5
FAM3D-205ENST00000498347 ZBTB48P10074 688 aaPredicted RBP11.95□□□□□ -0.5
FAM3D-205ENST00000498347 GPSM2P81274 684 aa11.95□□□□□ -0.5
FAM3D-205ENST00000498347 PRKG1Q13976 671 aa11.95□□□□□ -0.5
FAM3D-205ENST00000498347 GPR153Q6NV75 609 aa11.95□□□□□ -0.5
FAM3D-205ENST00000498347 MCM10Q7L590 875 aa11.95□□□□□ -0.5
FAM3D-205ENST00000498347 TBC1D16Q8TBP0 767 aa11.95□□□□□ -0.5
FAM3D-205ENST00000498347 GMLQ99445 158 aa11.95□□□□□ -0.5
FAM3D-205ENST00000498347 HTATIP2Q9BUP3 242 aa11.95□□□□□ -0.5
FAM3D-205ENST00000498347 SOX1O00570 391 aaPredicted RBP11.94□□□□□ -0.5
FAM3D-205ENST00000498347 HTATSF1O43719 755 aaKnown RBP11.94□□□□□ -0.5
FAM3D-205ENST00000498347 CRHR2Q13324 411 aa11.94□□□□□ -0.5
FAM3D-205ENST00000498347 LRCH3Q96II8 777 aa11.94□□□□□ -0.5
FAM3D-205ENST00000498347 MIS18AQ9NYP9 233 aa11.94□□□□□ -0.5
FAM3D-205ENST00000498347 TRMT112Q9UI30 125 aaKnown RBP11.94□□□□□ -0.5
FAM3D-205ENST00000498347 ANGEL1Q9UNK9 670 aaKnown RBP11.94□□□□□ -0.5
FAM3D-205ENST00000498347 STXBP5LQ9Y2K9 1186 aa11.94□□□□□ -0.5
FAM3D-205ENST00000498347 PTCH2Q9Y6C5 1203 aa11.94□□□□□ -0.5
FAM3D-205ENST00000498347 COL6A3P12111 3177 aa11.93□□□□□ -0.5
FAM3D-205ENST00000498347 MYCP01106 439 aaPredicted RBP11.93□□□□□ -0.5
FAM3D-205ENST00000498347 NBPF9Q3BBW0 867 aa11.93□□□□□ -0.5
FAM3D-205ENST00000498347 AMER1Q5JTC6 1135 aaPredicted RBP11.93□□□□□ -0.5
FAM3D-205ENST00000498347 YTHDC1Q96MU7 727 aaKnown RBP11.93□□□□□ -0.5
FAM3D-205ENST00000498347 UNCXA6NJT0 531 aa11.92□□□□□ -0.5
FAM3D-205ENST00000498347 ZBTB7BO15156 539 aaPredicted RBP11.92□□□□□ -0.5
FAM3D-205ENST00000498347 CAP1Q01518 475 aa11.92□□□□□ -0.5
FAM3D-205ENST00000498347 HSP90AB3PQ58FF7 597 aa11.92□□□□□ -0.5
FAM3D-205ENST00000498347 OGFOD1Q8N543 542 aa11.92□□□□□ -0.5
FAM3D-205ENST00000498347 DEFB123Q8N688 67 aa11.92□□□□□ -0.5
FAM3D-205ENST00000498347 NKX2-3Q8TAU0 364 aa11.92□□□□□ -0.5
FAM3D-205ENST00000498347 CELF1Q92879 486 aaKnown RBP11.92□□□□□ -0.5
FAM3D-205ENST00000498347 SH3TC1Q8TE82 1336 aa11.91□□□□□ -0.5
FAM3D-205ENST00000498347 USP17L3A6NCW0 530 aa11.91□□□□□ -0.5
FAM3D-205ENST00000498347 USP17L4A6NCW7 530 aa11.91□□□□□ -0.5
FAM3D-205ENST00000498347 PRKAR2BP31323 418 aa11.91□□□□□ -0.5
FAM3D-205ENST00000498347 RPS8P62241 208 aaKnown RBP11.91□□□□□ -0.5
FAM3D-205ENST00000498347 USP17L1Q7RTZ2 530 aa11.91□□□□□ -0.5
FAM3D-205ENST00000498347 NLRP10Q86W26 655 aa11.91□□□□□ -0.5
FAM3D-205ENST00000498347 PNISRQ8TF01 805 aaKnown RBP11.91□□□□□ -0.5
FAM3D-205ENST00000498347 WNK4Q96J92 1243 aa11.91□□□□□ -0.5
FAM3D-205ENST00000498347 PRDM6Q9NQX0 595 aa11.91□□□□□ -0.5
FAM3D-205ENST00000498347 PODXL2Q9NZ53 605 aa11.91□□□□□ -0.5
FAM3D-205ENST00000498347 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.91□□□□□ -0.5
FAM3D-205ENST00000498347 ZNF609O15014 1411 aa11.91□□□□□ -0.5
FAM3D-205ENST00000498347 RANBP2P49792 3224 aaKnown RBP11.9□□□□□ -0.5
FAM3D-205ENST00000498347 HTTP42858 3142 aa11.9□□□□□ -0.5
FAM3D-205ENST00000498347 WNT10BO00744 389 aa11.9□□□□□ -0.5
FAM3D-205ENST00000498347 MMP14P50281 582 aa11.9□□□□□ -0.5
FAM3D-205ENST00000498347 DCTN1Q14203 1278 aa11.9□□□□□ -0.5
FAM3D-205ENST00000498347 SF3B3Q15393 1217 aaKnown RBP11.9□□□□□ -0.5
FAM3D-205ENST00000498347 MAP3K11Q16584 847 aa11.9□□□□□ -0.5
FAM3D-205ENST00000498347 ERBB4Q15303 1308 aa11.89□□□□□ -0.51
FAM3D-205ENST00000498347 DUOX1Q9NRD9 1551 aa11.89□□□□□ -0.51
FAM3D-205ENST00000498347 TESPA1A2RU30 521 aaPredicted RBP11.89□□□□□ -0.51
FAM3D-205ENST00000498347 PPP1R12BO60237 982 aaPredicted RBP11.89□□□□□ -0.51
FAM3D-205ENST00000498347 EIF4A1P60842 406 aaKnown RBP11.89□□□□□ -0.51
FAM3D-205ENST00000498347 PODNQ7Z5L7 613 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms