RNA–Protein interactions for RNA: ENST00000498069.5

SCG5-208, Transcript of secretogranin V, human

TSL 2

Gene SCG5, Length 612 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCG5-208	ENST00000498069	GPRC5D	Q9NZD1	345 aa		12.84	□□□□□ -0.35
SCG5-208	ENST00000498069	MINPP1	Q9UNW1	487 aa		12.84	□□□□□ -0.35
SCG5-208	ENST00000498069	CHMP3	Q9Y3E7	222 aa		12.84	□□□□□ -0.35
SCG5-208	ENST00000498069	SBF1	O95248	1867 aa		12.83	□□□□□ -0.36
SCG5-208	ENST00000498069	YDJC	A8MPS7	323 aa		12.83	□□□□□ -0.36
SCG5-208	ENST00000498069		H7C1D1	291 aa		12.83	□□□□□ -0.36
SCG5-208	ENST00000498069	GRM8	O00222	908 aa		12.83	□□□□□ -0.36
SCG5-208	ENST00000498069	ECE2	O60344	883 aa		12.83	□□□□□ -0.36
SCG5-208	ENST00000498069	IFIT5	Q13325	482 aa	Known RBP	12.83	□□□□□ -0.36
SCG5-208	ENST00000498069	ALDH1L2	Q3SY69	923 aa		12.83	□□□□□ -0.36
SCG5-208	ENST00000498069	MAP1S	Q66K74	1059 aa	Predicted RBP	12.83	□□□□□ -0.36
SCG5-208	ENST00000498069	TRMT2A	Q8IZ69	625 aa	Known RBP	12.83	□□□□□ -0.36
SCG5-208	ENST00000498069	SSH1	Q8WYL5	1049 aa		12.83	□□□□□ -0.36
SCG5-208	ENST00000498069	GPR101	Q96P66	508 aa	Predicted RBP	12.83	□□□□□ -0.36
SCG5-208	ENST00000498069	ANKRD2	Q9GZV1	360 aa		12.83	□□□□□ -0.36
SCG5-208	ENST00000498069	CNOT7	Q9UIV1	285 aa	Known RBP	12.83	□□□□□ -0.36
SCG5-208	ENST00000498069	ARFGEF2	Q9Y6D5	1785 aa		12.83	□□□□□ -0.36
SCG5-208	ENST00000498069	PTPRC	P08575	1304 aa		12.83	□□□□□ -0.36
SCG5-208	ENST00000498069	RTL9	Q8NET4	1388 aa		12.82	□□□□□ -0.36
SCG5-208	ENST00000498069	WDR90	Q96KV7	1748 aa		12.82	□□□□□ -0.36
SCG5-208	ENST00000498069	CT47B1	P0C2W7	299 aa	Predicted RBP	12.82	□□□□□ -0.36
SCG5-208	ENST00000498069	FOXO4	P98177	505 aa		12.82	□□□□□ -0.36
SCG5-208	ENST00000498069	CCDC57	Q2TAC2	916 aa		12.82	□□□□□ -0.36
SCG5-208	ENST00000498069	FAM161A	Q3B820	660 aa		12.82	□□□□□ -0.36
SCG5-208	ENST00000498069	TAF7L	Q5H9L4	462 aa		12.82	□□□□□ -0.36
SCG5-208	ENST00000498069	LMBR1L	Q6UX01	489 aa		12.82	□□□□□ -0.36
SCG5-208	ENST00000498069	KLRG1	Q96E93	195 aa		12.82	□□□□□ -0.36
SCG5-208	ENST00000498069	LEMD3	Q9Y2U8	911 aa		12.82	□□□□□ -0.36
SCG5-208	ENST00000498069	PSMD14	O00487	310 aa		12.81	□□□□□ -0.36
SCG5-208	ENST00000498069	ITGBL1	O95965	494 aa	Predicted RBP	12.81	□□□□□ -0.36
SCG5-208	ENST00000498069	CCT4	P50991	539 aa	Known RBP	12.81	□□□□□ -0.36
SCG5-208	ENST00000498069	DPF2	Q92785	391 aa		12.81	□□□□□ -0.36
SCG5-208	ENST00000498069	CREBZF	Q9NS37	354 aa		12.81	□□□□□ -0.36
SCG5-208	ENST00000498069	SMC4	Q9NTJ3	1288 aa		12.81	□□□□□ -0.36
SCG5-208	ENST00000498069	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.81	□□□□□ -0.36
SCG5-208	ENST00000498069	TIAM2	Q8IVF5	1701 aa		12.8	□□□□□ -0.36
SCG5-208	ENST00000498069	ANKRD36C	Q5JPF3	1778 aa		12.8	□□□□□ -0.36
SCG5-208	ENST00000498069	RPS12	P25398	132 aa	Known RBP	12.8	□□□□□ -0.36
SCG5-208	ENST00000498069	KCNJ4	P48050	445 aa		12.8	□□□□□ -0.36
SCG5-208	ENST00000498069	PODN	Q7Z5L7	613 aa		12.8	□□□□□ -0.36
SCG5-208	ENST00000498069	MICALL2	Q8IY33	904 aa		12.8	□□□□□ -0.36
SCG5-208	ENST00000498069	KCNQ5	Q9NR82	932 aa		12.8	□□□□□ -0.36
SCG5-208	ENST00000498069	COL4A5	P29400	1685 aa		12.8	□□□□□ -0.36
SCG5-208	ENST00000498069	TMEM88B	A6NKF7	163 aa		12.79	□□□□□ -0.36
SCG5-208	ENST00000498069	VIL1	P09327	827 aa	Known RBP	12.79	□□□□□ -0.36
SCG5-208	ENST00000498069	LDHAL6A	Q6ZMR3	332 aa		12.79	□□□□□ -0.36
SCG5-208	ENST00000498069	ZC3H15	Q8WU90	426 aa	Known RBP	12.79	□□□□□ -0.36
SCG5-208	ENST00000498069	PASK	Q96RG2	1323 aa		12.79	□□□□□ -0.36
SCG5-208	ENST00000498069	WTIP	A6NIX2	430 aa	Predicted RBP	12.78	□□□□□ -0.36
SCG5-208	ENST00000498069	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.78	□□□□□ -0.36
SCG5-208	ENST00000498069	CHRND	Q07001	517 aa		12.78	□□□□□ -0.36
SCG5-208	ENST00000498069	EPHA10	Q5JZY3	1008 aa		12.78	□□□□□ -0.36
SCG5-208	ENST00000498069	RBM26	Q5T8P6	1007 aa	Known RBP	12.78	□□□□□ -0.36
SCG5-208	ENST00000498069	COA1	Q9GZY4	146 aa		12.78	□□□□□ -0.36
SCG5-208	ENST00000498069	CNNM1	Q9NRU3	951 aa		12.78	□□□□□ -0.36
SCG5-208	ENST00000498069	NOB1	Q9ULX3	412 aa	Known RBP	12.78	□□□□□ -0.36
SCG5-208	ENST00000498069	ZNF804B	A4D1E1	1349 aa		12.78	□□□□□ -0.36
SCG5-208	ENST00000498069	CACNA1S	Q13698	1873 aa		12.77	□□□□□ -0.37
SCG5-208	ENST00000498069	USP17L3	A6NCW0	530 aa		12.77	□□□□□ -0.37
SCG5-208	ENST00000498069	USP17L4	A6NCW7	530 aa		12.77	□□□□□ -0.37
SCG5-208	ENST00000498069	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
SCG5-208	ENST00000498069	USP17L1	Q7RTZ2	530 aa		12.77	□□□□□ -0.37
SCG5-208	ENST00000498069	AGBL3	Q8NEM8	1001 aa		12.77	□□□□□ -0.37
SCG5-208	ENST00000498069	SUCLG2	Q96I99	432 aa		12.77	□□□□□ -0.37
SCG5-208	ENST00000498069	PLIN1	O60240	522 aa		12.76	□□□□□ -0.37
SCG5-208	ENST00000498069	TAF5L	O75529	589 aa		12.76	□□□□□ -0.37
SCG5-208	ENST00000498069	HIRA	P54198	1017 aa	Predicted RBP	12.76	□□□□□ -0.37
SCG5-208	ENST00000498069	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.76	□□□□□ -0.37
SCG5-208	ENST00000498069	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.76	□□□□□ -0.37
SCG5-208	ENST00000498069	CDC37L1	Q7L3B6	337 aa		12.76	□□□□□ -0.37
SCG5-208	ENST00000498069	SAMD7	Q7Z3H4	446 aa		12.76	□□□□□ -0.37
SCG5-208	ENST00000498069	JMY	Q8N9B5	988 aa		12.76	□□□□□ -0.37
SCG5-208	ENST00000498069	HELB	Q8NG08	1087 aa	Predicted RBP	12.76	□□□□□ -0.37
SCG5-208	ENST00000498069	FBXW7	Q969H0	707 aa		12.76	□□□□□ -0.37
SCG5-208	ENST00000498069	ZNF594	Q96JF6	807 aa	Predicted RBP	12.76	□□□□□ -0.37
SCG5-208	ENST00000498069	API5	Q9BZZ5	524 aa	Known RBP	12.76	□□□□□ -0.37
SCG5-208	ENST00000498069	MKRN1	Q9UHC7	482 aa	Known RBP	12.76	□□□□□ -0.37
SCG5-208	ENST00000498069	PGAP2	Q9UHJ9	254 aa		12.76	□□□□□ -0.37
SCG5-208	ENST00000498069	UTY	O14607	1347 aa		12.76	□□□□□ -0.37
SCG5-208	ENST00000498069	DDX60	Q8IY21	1712 aa	Known RBP	12.76	□□□□□ -0.37
SCG5-208	ENST00000498069	SHTN1	A0MZ66	631 aa		12.75	□□□□□ -0.37
SCG5-208	ENST00000498069	RARS	P54136	660 aa	Known RBP	12.75	□□□□□ -0.37
SCG5-208	ENST00000498069	TRPM4	Q8TD43	1214 aa		12.75	□□□□□ -0.37
SCG5-208	ENST00000498069	DCPS	Q96C86	337 aa	Known RBP	12.75	□□□□□ -0.37
SCG5-208	ENST00000498069	USP44	Q9H0E7	712 aa		12.75	□□□□□ -0.37
SCG5-208	ENST00000498069	MED23	Q9ULK4	1368 aa		12.75	□□□□□ -0.37
SCG5-208	ENST00000498069	ABT1	Q9ULW3	272 aa	Known RBP	12.75	□□□□□ -0.37
SCG5-208	ENST00000498069	HDAC5	Q9UQL6	1122 aa		12.75	□□□□□ -0.37
SCG5-208	ENST00000498069	IPO8	O15397	1037 aa	Known RBP	12.74	□□□□□ -0.37
SCG5-208	ENST00000498069	USP17L8	P0C7I0	530 aa		12.74	□□□□□ -0.37
SCG5-208	ENST00000498069	BRPF1	P55201	1214 aa	Predicted RBP	12.74	□□□□□ -0.37
SCG5-208	ENST00000498069	DEFB115	Q30KQ5	88 aa		12.74	□□□□□ -0.37
SCG5-208	ENST00000498069	STRIP1	Q5VSL9	837 aa		12.74	□□□□□ -0.37
SCG5-208	ENST00000498069	TTLL5	Q6EMB2	1281 aa		12.74	□□□□□ -0.37
SCG5-208	ENST00000498069	TXNRD3	Q86VQ6	643 aa		12.74	□□□□□ -0.37
SCG5-208	ENST00000498069	OGFOD1	Q8N543	542 aa		12.74	□□□□□ -0.37
SCG5-208	ENST00000498069	KAZALD1	Q96I82	304 aa		12.74	□□□□□ -0.37
SCG5-208	ENST00000498069	BICC1	Q9H694	974 aa	Known RBP	12.74	□□□□□ -0.37
SCG5-208	ENST00000498069	DUOX1	Q9NRD9	1551 aa		12.73	□□□□□ -0.37
SCG5-208	ENST00000498069	DICER1	Q9UPY3	1922 aa	Known RBP	12.73	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms