RNA–Protein interactions for RNA: ENST00000497739.1

PTPN3-206, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 3

Gene PTPN3, Length 781 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-206ENST00000497739 ZNF710Q8N1W2 664 aa12.31□□□□□ -0.44
PTPN3-206ENST00000497739 NBPF15Q8N660 670 aa12.31□□□□□ -0.44
PTPN3-206ENST00000497739 CHMP4AQ9BY43 222 aa12.31□□□□□ -0.44
PTPN3-206ENST00000497739 ABCC12Q96J65 1359 aa12.3□□□□□ -0.44
PTPN3-206ENST00000497739 MYL6BP14649 208 aa12.3□□□□□ -0.44
PTPN3-206ENST00000497739 IARSP41252 1262 aaKnown RBP12.3□□□□□ -0.44
PTPN3-206ENST00000497739 FMR1Q06787 632 aaKnown RBP eCLIP12.3□□□□□ -0.44
PTPN3-206ENST00000497739 PDIA6Q15084 440 aa12.3□□□□□ -0.44
PTPN3-206ENST00000497739 DEFB115Q30KQ5 88 aa12.3□□□□□ -0.44
PTPN3-206ENST00000497739 RTKN2Q8IZC4 609 aa12.3□□□□□ -0.44
PTPN3-206ENST00000497739 NGEFQ8N5V2 710 aa12.3□□□□□ -0.44
PTPN3-206ENST00000497739 FAM163AQ96GL9 167 aaPredicted RBP12.3□□□□□ -0.44
PTPN3-206ENST00000497739 DDX21Q9NR30 783 aaKnown RBP eCLIP12.3□□□□□ -0.44
PTPN3-206ENST00000497739 RGS19P49795 217 aa12.29□□□□□ -0.44
PTPN3-206ENST00000497739 SCNN1DP51172 638 aa12.29□□□□□ -0.44
PTPN3-206ENST00000497739 MAP2K1Q02750 393 aaPredicted RBP12.29□□□□□ -0.44
PTPN3-206ENST00000497739 CCDC184Q52MB2 194 aa12.29□□□□□ -0.44
PTPN3-206ENST00000497739 PSMD1Q99460 953 aa12.29□□□□□ -0.44
PTPN3-206ENST00000497739 IFT57Q9NWB7 429 aa12.29□□□□□ -0.44
PTPN3-206ENST00000497739 ERBB4Q15303 1308 aa12.29□□□□□ -0.44
PTPN3-206ENST00000497739 EVI5O60447 810 aa12.28□□□□□ -0.44
PTPN3-206ENST00000497739 GTF2E1P29083 439 aaPredicted RBP12.28□□□□□ -0.44
PTPN3-206ENST00000497739 CST9Q5W186 159 aa12.28□□□□□ -0.44
PTPN3-206ENST00000497739 NIP7Q9Y221 180 aaKnown RBP eCLIP12.28□□□□□ -0.44
PTPN3-206ENST00000497739 RIC1Q4ADV7 1423 aa12.28□□□□□ -0.44
PTPN3-206ENST00000497739 SPDYE16A6NNV3 312 aaPredicted RBP12.27□□□□□ -0.45
PTPN3-206ENST00000497739 NUDT7P0C024 238 aa12.27□□□□□ -0.45
PTPN3-206ENST00000497739 HLFQ16534 295 aa12.27□□□□□ -0.45
PTPN3-206ENST00000497739 SYNE4Q8N205 404 aa12.27□□□□□ -0.45
PTPN3-206ENST00000497739 NECTIN2Q92692 538 aa12.27□□□□□ -0.45
PTPN3-206ENST00000497739 CAPNS2Q96L46 248 aa12.27□□□□□ -0.45
PTPN3-206ENST00000497739 ABT1Q9ULW3 272 aaKnown RBP12.27□□□□□ -0.45
PTPN3-206ENST00000497739 SALL2Q9Y467 1007 aaPredicted RBP12.27□□□□□ -0.45
PTPN3-206ENST00000497739 NUP98P52948 1817 aa12.26□□□□□ -0.45
PTPN3-206ENST00000497739 CHL1O00533 1208 aa12.26□□□□□ -0.45
PTPN3-206ENST00000497739 HOXB7P09629 217 aa12.26□□□□□ -0.45
PTPN3-206ENST00000497739 EPS15P42566 896 aa12.26□□□□□ -0.45
PTPN3-206ENST00000497739 HDGFL1Q5TGJ6 251 aa12.26□□□□□ -0.45
PTPN3-206ENST00000497739 TPTE2Q6XPS3 522 aa12.26□□□□□ -0.45
PTPN3-206ENST00000497739 TRAF5O00463 557 aa12.25□□□□□ -0.45
PTPN3-206ENST00000497739 HOXA10P31260 410 aaPredicted RBP12.25□□□□□ -0.45
PTPN3-206ENST00000497739 CCDC27Q2M243 656 aa12.25□□□□□ -0.45
PTPN3-206ENST00000497739 DIEXFQ68CQ4 756 aaKnown RBP12.25□□□□□ -0.45
PTPN3-206ENST00000497739 CYP4F22Q6NT55 531 aa12.25□□□□□ -0.45
PTPN3-206ENST00000497739 MBIPQ9NS73 344 aa12.25□□□□□ -0.45
PTPN3-206ENST00000497739 TLL2Q9Y6L7 1015 aa12.25□□□□□ -0.45
PTPN3-206ENST00000497739 ALDH1B1P30837 517 aa12.24□□□□□ -0.45
PTPN3-206ENST00000497739 IBTKQ9P2D0 1353 aaPredicted RBP12.24□□□□□ -0.45
PTPN3-206ENST00000497739 DBF4Q9UBU7 674 aaPredicted RBP12.24□□□□□ -0.45
PTPN3-206ENST00000497739 MAP3K15Q6ZN16 1313 aa12.23□□□□□ -0.45
PTPN3-206ENST00000497739 UBN2Q6ZU65 1347 aa12.23□□□□□ -0.45
PTPN3-206ENST00000497739 FAM177BA6PVY3 158 aa12.23□□□□□ -0.45
PTPN3-206ENST00000497739 MLLT1Q03111 559 aaPredicted RBP12.23□□□□□ -0.45
PTPN3-206ENST00000497739 AIMP1Q12904 312 aaKnown RBP12.23□□□□□ -0.45
PTPN3-206ENST00000497739 DUSP27Q5VZP5 1158 aa12.23□□□□□ -0.45
PTPN3-206ENST00000497739 NUTM1Q86Y26 1132 aa12.23□□□□□ -0.45
PTPN3-206ENST00000497739 WWC1Q8IX03 1113 aa12.23□□□□□ -0.45
PTPN3-206ENST00000497739 JDP2Q8WYK2 163 aa12.23□□□□□ -0.45
PTPN3-206ENST00000497739 GPR101Q96P66 508 aaPredicted RBP12.23□□□□□ -0.45
PTPN3-206ENST00000497739 STK31Q9BXU1 1019 aa12.23□□□□□ -0.45
PTPN3-206ENST00000497739 NYXQ9GZU5 481 aa12.23□□□□□ -0.45
PTPN3-206ENST00000497739 ZBTB3Q9H5J0 574 aa12.23□□□□□ -0.45
PTPN3-206ENST00000497739 MYH16Q9H6N6 1097 aa12.23□□□□□ -0.45
PTPN3-206ENST00000497739 IL16Q14005 1332 aa12.22□□□□□ -0.45
PTPN3-206ENST00000497739 ERVV-1B6SEH8 477 aa12.22□□□□□ -0.45
PTPN3-206ENST00000497739 CCER2I3L3R5 266 aa12.22□□□□□ -0.45
PTPN3-206ENST00000497739 ELL2O00472 640 aaPredicted RBP12.22□□□□□ -0.45
PTPN3-206ENST00000497739 AOC2O75106 756 aa12.22□□□□□ -0.45
PTPN3-206ENST00000497739 ECE1P42892 770 aa12.22□□□□□ -0.45
PTPN3-206ENST00000497739 HSP90AB3PQ58FF7 597 aa12.22□□□□□ -0.45
PTPN3-206ENST00000497739 CC2D2BQ6DHV5 1058 aa12.22□□□□□ -0.45
PTPN3-206ENST00000497739 USP50Q70EL3 339 aaPredicted RBP12.22□□□□□ -0.45
PTPN3-206ENST00000497739 SAPCD2Q86UD0 394 aa12.22□□□□□ -0.45
PTPN3-206ENST00000497739 HYPKQ9NX55 129 aa12.22□□□□□ -0.45
PTPN3-206ENST00000497739 TSKSQ9UJT2 592 aa12.22□□□□□ -0.45
PTPN3-206ENST00000497739 GJA3Q9Y6H8 435 aa12.22□□□□□ -0.45
PTPN3-206ENST00000497739 ANKRD36CQ5JPF3 1778 aa12.22□□□□□ -0.45
PTPN3-206ENST00000497739 CCDC85CA6NKD9 419 aa12.21□□□□□ -0.45
PTPN3-206ENST00000497739 SEMA3EO15041 775 aa12.21□□□□□ -0.45
PTPN3-206ENST00000497739 EIF6P56537 245 aaKnown RBP12.21□□□□□ -0.45
PTPN3-206ENST00000497739 CCDC30Q5VVM6 783 aa12.21□□□□□ -0.45
PTPN3-206ENST00000497739 CHPF2Q9P2E5 772 aa12.21□□□□□ -0.45
PTPN3-206ENST00000497739 LHX6Q9UPM6 363 aa12.21□□□□□ -0.45
PTPN3-206ENST00000497739 CACNA1FO60840 1977 aa12.2□□□□□ -0.46
PTPN3-206ENST00000497739 DDX58O95786 925 aaKnown RBP12.2□□□□□ -0.46
PTPN3-206ENST00000497739 LMOD1P29536 600 aaPredicted RBP12.2□□□□□ -0.46
PTPN3-206ENST00000497739 MAP2K2P36507 400 aa12.2□□□□□ -0.46
PTPN3-206ENST00000497739 KRT24Q2M2I5 525 aa12.2□□□□□ -0.46
PTPN3-206ENST00000497739 PPP1R42Q7Z4L9 355 aa12.2□□□□□ -0.46
PTPN3-206ENST00000497739 WDR63Q8IWG1 891 aa12.2□□□□□ -0.46
PTPN3-206ENST00000497739 LARGE2Q8N3Y3 721 aa12.2□□□□□ -0.46
PTPN3-206ENST00000497739 TSR2Q969E8 191 aaKnown RBP12.2□□□□□ -0.46
PTPN3-206ENST00000497739 GPRC5DQ9NZD1 345 aa12.2□□□□□ -0.46
PTPN3-206ENST00000497739 NTSR2O95665 410 aa12.19□□□□□ -0.46
PTPN3-206ENST00000497739 ZNF853P0CG23 659 aa12.19□□□□□ -0.46
PTPN3-206ENST00000497739 GPTP24298 496 aa12.19□□□□□ -0.46
PTPN3-206ENST00000497739 GRIPAP1Q4V328 841 aa12.19□□□□□ -0.46
PTPN3-206ENST00000497739 PARP10Q53GL7 1025 aa12.19□□□□□ -0.46
PTPN3-206ENST00000497739 GIGYF2Q6Y7W6 1299 aaKnown RBP12.19□□□□□ -0.46
PTPN3-206ENST00000497739 COPS6Q7L5N1 327 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms