RNA–Protein interactions for RNA: ENST00000497707.5

COMMD6-212, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-212ENST00000497707 PDGFDQ9GZP0 370 aaPredicted RBP13.52□□□□□ -0.25
COMMD6-212ENST00000497707 GPR108Q9NPR9 543 aa13.52□□□□□ -0.25
COMMD6-212ENST00000497707 CARMIL3Q8ND23 1372 aa13.52□□□□□ -0.25
COMMD6-212ENST00000497707 NRXN2Q9P2S2 1712 aa13.51□□□□□ -0.25
COMMD6-212ENST00000497707 AOX1Q06278 1338 aa13.51□□□□□ -0.25
COMMD6-212ENST00000497707 SDSP20132 328 aa13.51□□□□□ -0.25
COMMD6-212ENST00000497707 FXR2P51116 673 aaKnown RBP eCLIP13.51□□□□□ -0.25
COMMD6-212ENST00000497707 CCDC152Q4G0S7 254 aa13.51□□□□□ -0.25
COMMD6-212ENST00000497707 LDHAL6AQ6ZMR3 332 aa13.51□□□□□ -0.25
COMMD6-212ENST00000497707 CCDC125Q86Z20 511 aa13.51□□□□□ -0.25
COMMD6-212ENST00000497707 DBNLQ9UJU6 430 aaKnown RBP13.51□□□□□ -0.25
COMMD6-212ENST00000497707 LRP5O75197 1615 aa13.5□□□□□ -0.25
COMMD6-212ENST00000497707 RIC1Q4ADV7 1423 aa13.5□□□□□ -0.25
COMMD6-212ENST00000497707 HSP90B1P14625 803 aaKnown RBP13.5□□□□□ -0.25
COMMD6-212ENST00000497707 SF3B2Q13435 895 aaKnown RBP13.5□□□□□ -0.25
COMMD6-212ENST00000497707 NLGN1Q8N2Q7 840 aa13.5□□□□□ -0.25
COMMD6-212ENST00000497707 CELF1Q92879 486 aaKnown RBP13.5□□□□□ -0.25
COMMD6-212ENST00000497707 NLRP3Q96P20 1036 aa13.5□□□□□ -0.25
COMMD6-212ENST00000497707 DBNDD2Q9BQY9 259 aa13.5□□□□□ -0.25
COMMD6-212ENST00000497707 STK32BQ9NY57 414 aa13.5□□□□□ -0.25
COMMD6-212ENST00000497707 RBM19Q9Y4C8 960 aaKnown RBP13.5□□□□□ -0.25
COMMD6-212ENST00000497707 SPEF2Q9C093 1822 aa13.5□□□□□ -0.25
COMMD6-212ENST00000497707 ANKRD31Q8N7Z5 1873 aa13.49□□□□□ -0.25
COMMD6-212ENST00000497707 TTC41PQ6P2S7 1318 aa13.49□□□□□ -0.25
COMMD6-212ENST00000497707 KLRG2A4D1S0 409 aaPredicted RBP13.49□□□□□ -0.25
COMMD6-212ENST00000497707 IFIT2P09913 472 aaKnown RBP13.49□□□□□ -0.25
COMMD6-212ENST00000497707 GTF2E1P29083 439 aaPredicted RBP13.49□□□□□ -0.25
COMMD6-212ENST00000497707 ECHDC1Q9NTX5 307 aa13.49□□□□□ -0.25
COMMD6-212ENST00000497707 CEP126Q9P2H0 1117 aa13.49□□□□□ -0.25
COMMD6-212ENST00000497707 WTIPA6NIX2 430 aaPredicted RBP13.48□□□□□ -0.25
COMMD6-212ENST00000497707 FGFR2P21802 821 aa13.48□□□□□ -0.25
COMMD6-212ENST00000497707 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
COMMD6-212ENST00000497707 TAF7LQ5H9L4 462 aa13.48□□□□□ -0.25
COMMD6-212ENST00000497707 CNBD1Q8NA66 436 aa13.48□□□□□ -0.25
COMMD6-212ENST00000497707 HELBQ8NG08 1087 aaPredicted RBP13.48□□□□□ -0.25
COMMD6-212ENST00000497707 SP7Q8TDD2 431 aaPredicted RBP13.48□□□□□ -0.25
COMMD6-212ENST00000497707 A0A1B0GUL7 405 aa13.47□□□□□ -0.25
COMMD6-212ENST00000497707 SNAP23O00161 211 aa13.47□□□□□ -0.25
COMMD6-212ENST00000497707 PDE8BO95263 885 aa13.47□□□□□ -0.25
COMMD6-212ENST00000497707 ADORA1P30542 326 aa13.47□□□□□ -0.25
COMMD6-212ENST00000497707 MSL1Q68DK7 614 aa13.47□□□□□ -0.25
COMMD6-212ENST00000497707 TBC1D9Q6ZT07 1266 aa13.47□□□□□ -0.25
COMMD6-212ENST00000497707 SLC51AQ86UW1 340 aa13.47□□□□□ -0.25
COMMD6-212ENST00000497707 UPF1Q92900 1129 aaKnown RBP eCLIP13.47□□□□□ -0.25
COMMD6-212ENST00000497707 CNNM1Q9NRU3 951 aa13.47□□□□□ -0.25
COMMD6-212ENST00000497707 A0A1B0GUL6 1792 aa13.47□□□□□ -0.25
COMMD6-212ENST00000497707 ZNF609O15014 1411 aa13.47□□□□□ -0.25
COMMD6-212ENST00000497707 MAP4K4O95819 1239 aaPredicted RBP13.46□□□□□ -0.25
COMMD6-212ENST00000497707 MMP10P09238 476 aa13.46□□□□□ -0.25
COMMD6-212ENST00000497707 ATP5JP18859 108 aa13.46□□□□□ -0.25
COMMD6-212ENST00000497707 RPS8P62241 208 aaKnown RBP13.46□□□□□ -0.25
COMMD6-212ENST00000497707 CRY2Q49AN0 593 aa13.46□□□□□ -0.25
COMMD6-212ENST00000497707 METTL24Q5JXM2 366 aa13.46□□□□□ -0.25
COMMD6-212ENST00000497707 BSDC1Q9NW68 430 aaPredicted RBP13.46□□□□□ -0.25
COMMD6-212ENST00000497707 MROH5Q6ZUA9 1318 aa13.45□□□□□ -0.26
COMMD6-212ENST00000497707 TAF5LO75529 589 aa13.45□□□□□ -0.26
COMMD6-212ENST00000497707 GLRX3O76003 335 aaKnown RBP13.45□□□□□ -0.26
COMMD6-212ENST00000497707 CHRNDQ07001 517 aa13.45□□□□□ -0.26
COMMD6-212ENST00000497707 XAGE2Q96GT9 111 aa13.45□□□□□ -0.26
COMMD6-212ENST00000497707 NEUROD6Q96NK8 337 aa13.45□□□□□ -0.26
COMMD6-212ENST00000497707 MINPP1Q9UNW1 487 aa13.45□□□□□ -0.26
COMMD6-212ENST00000497707 HOXA10P31260 410 aaPredicted RBP13.44□□□□□ -0.26
COMMD6-212ENST00000497707 IGHMBP2P38935 993 aaKnown RBP13.44□□□□□ -0.26
COMMD6-212ENST00000497707 ANKRD18AQ8IVF6 992 aa13.44□□□□□ -0.26
COMMD6-212ENST00000497707 CDC5LQ99459 802 aaKnown RBP13.44□□□□□ -0.26
COMMD6-212ENST00000497707 MPHOSPH8Q99549 860 aa13.44□□□□□ -0.26
COMMD6-212ENST00000497707 BOLA2Q9H3K6 86 aa13.44□□□□□ -0.26
COMMD6-212ENST00000497707 AKAP2Q9Y2D5 859 aa13.44□□□□□ -0.26
COMMD6-212ENST00000497707 CDC45O75419 566 aa13.43□□□□□ -0.26
COMMD6-212ENST00000497707 CHMLP26374 656 aa13.43□□□□□ -0.26
COMMD6-212ENST00000497707 ST5P78524 1137 aa13.43□□□□□ -0.26
COMMD6-212ENST00000497707 ATP2B3Q16720 1220 aa13.43□□□□□ -0.26
COMMD6-212ENST00000497707 EDC3Q96F86 508 aaKnown RBP13.43□□□□□ -0.26
COMMD6-212ENST00000497707 BRIP1Q9BX63 1249 aa13.43□□□□□ -0.26
COMMD6-212ENST00000497707 NDUFB9Q9Y6M9 179 aa13.43□□□□□ -0.26
COMMD6-212ENST00000497707 AK9Q5TCS8 1911 aa13.43□□□□□ -0.26
COMMD6-212ENST00000497707 AKAP11Q9UKA4 1901 aa13.43□□□□□ -0.26
COMMD6-212ENST00000497707 ERC2O15083 957 aa13.42□□□□□ -0.26
COMMD6-212ENST00000497707 GRAPQ13588 217 aa13.42□□□□□ -0.26
COMMD6-212ENST00000497707 DDX46Q7L014 1031 aaKnown RBP13.42□□□□□ -0.26
COMMD6-212ENST00000497707 GRAPLQ8TC17 118 aaPredicted RBP13.42□□□□□ -0.26
COMMD6-212ENST00000497707 RILPL2Q969X0 211 aa13.42□□□□□ -0.26
COMMD6-212ENST00000497707 HAUS7Q99871 368 aa13.42□□□□□ -0.26
COMMD6-212ENST00000497707 IL25Q9H293 177 aa13.42□□□□□ -0.26
COMMD6-212ENST00000497707 PARP3Q9Y6F1 533 aa13.42□□□□□ -0.26
COMMD6-212ENST00000497707 ARAP2Q8WZ64 1704 aa13.42□□□□□ -0.26
COMMD6-212ENST00000497707 TRIM6-TRIM34B2RNG4 842 aa13.41□□□□□ -0.26
COMMD6-212ENST00000497707 HAX1O00165 279 aa13.41□□□□□ -0.26
COMMD6-212ENST00000497707 SCARF1Q14162 830 aa13.41□□□□□ -0.26
COMMD6-212ENST00000497707 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.41□□□□□ -0.26
COMMD6-212ENST00000497707 LPIN2Q92539 896 aa13.41□□□□□ -0.26
COMMD6-212ENST00000497707 CRAMP1Q96RY5 1269 aa13.41□□□□□ -0.26
COMMD6-212ENST00000497707 IRS2Q9Y4H2 1338 aa13.4□□□□□ -0.26
COMMD6-212ENST00000497707 NPHP1O15259 732 aa13.4□□□□□ -0.26
COMMD6-212ENST00000497707 SRGNP10124 158 aa13.4□□□□□ -0.26
COMMD6-212ENST00000497707 PUM3Q15397 648 aaKnown RBP13.4□□□□□ -0.26
COMMD6-212ENST00000497707 EVI5LQ96CN4 794 aa13.4□□□□□ -0.26
COMMD6-212ENST00000497707 GPATCH3Q96I76 525 aa13.4□□□□□ -0.26
COMMD6-212ENST00000497707 COL11A2P13942 1736 aaPredicted RBP13.39□□□□□ -0.27
COMMD6-212ENST00000497707 CHGBP05060 677 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms