RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 SH3BP2P78314 561 aa8.05□□□□□ -1.12
BRCA1-224ENST00000497488 DDR2Q16832 855 aa8.05□□□□□ -1.12
BRCA1-224ENST00000497488 C2orf27AQ580R0 203 aa8.05□□□□□ -1.12
BRCA1-224ENST00000497488 BRDTQ58F21 947 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-224ENST00000497488 VASH1Q7L8A9 365 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-224ENST00000497488 PPARGC1BQ86YN6 1023 aaKnown RBP8.05□□□□□ -1.12
BRCA1-224ENST00000497488 JAMLQ86YT9 394 aa8.05□□□□□ -1.12
BRCA1-224ENST00000497488 TEX2Q8IWB9 1127 aa8.05□□□□□ -1.12
BRCA1-224ENST00000497488 SNX29Q8TEQ0 813 aa8.05□□□□□ -1.12
BRCA1-224ENST00000497488 ZDHHC1Q8WTX9 485 aa8.05□□□□□ -1.12
BRCA1-224ENST00000497488 TSR2Q969E8 191 aaKnown RBP8.05□□□□□ -1.12
BRCA1-224ENST00000497488 SHDQ96IW2 340 aa8.05□□□□□ -1.12
BRCA1-224ENST00000497488 SRRTQ9BXP5 876 aaKnown RBP8.05□□□□□ -1.12
BRCA1-224ENST00000497488 ZFYVE28Q9HCC9 887 aa8.05□□□□□ -1.12
BRCA1-224ENST00000497488 NPHS2Q9NP85 383 aa8.05□□□□□ -1.12
BRCA1-224ENST00000497488 TMPRSS4Q9NRS4 437 aa8.05□□□□□ -1.12
BRCA1-224ENST00000497488 SH3BP5O60239 455 aa8.04□□□□□ -1.12
BRCA1-224ENST00000497488 ZPR1O75312 459 aa8.04□□□□□ -1.12
BRCA1-224ENST00000497488 GSTT1P30711 240 aa8.04□□□□□ -1.12
BRCA1-224ENST00000497488 GNALP38405 381 aa8.04□□□□□ -1.12
BRCA1-224ENST00000497488 MAP3K10Q02779 954 aa8.04□□□□□ -1.12
BRCA1-224ENST00000497488 NYAP1Q6ZVC0 841 aa8.04□□□□□ -1.12
BRCA1-224ENST00000497488 NBPF15Q8N660 670 aa8.04□□□□□ -1.12
BRCA1-224ENST00000497488 XAGE2Q96GT9 111 aa8.04□□□□□ -1.12
BRCA1-224ENST00000497488 PLA2G2EQ9NZK7 142 aa8.04□□□□□ -1.12
BRCA1-224ENST00000497488 ZNF232Q9UNY5 417 aa8.04□□□□□ -1.12
BRCA1-224ENST00000497488 ATP8A1Q9Y2Q0 1164 aa8.04□□□□□ -1.12
BRCA1-224ENST00000497488 TLL1O43897 1013 aa8.03□□□□□ -1.12
BRCA1-224ENST00000497488 COPS2P61201 443 aa8.03□□□□□ -1.12
BRCA1-224ENST00000497488 TLR1Q15399 786 aa8.03□□□□□ -1.12
BRCA1-224ENST00000497488 TCEA2Q15560 299 aa8.03□□□□□ -1.12
BRCA1-224ENST00000497488 DALRD3Q5D0E6 543 aaKnown RBP8.03□□□□□ -1.12
BRCA1-224ENST00000497488 FBXL19Q6PCT2 694 aa8.03□□□□□ -1.12
BRCA1-224ENST00000497488 XKR5Q6UX68 686 aa8.03□□□□□ -1.12
BRCA1-224ENST00000497488 WDR75Q8IWA0 830 aaKnown RBP8.03□□□□□ -1.12
BRCA1-224ENST00000497488 ZNF784Q8NCA9 323 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-224ENST00000497488 TRIM56Q9BRZ2 755 aaKnown RBP8.03□□□□□ -1.12
BRCA1-224ENST00000497488 PHACTR1Q9C0D0 580 aa8.03□□□□□ -1.12
BRCA1-224ENST00000497488 MAF1Q9H063 256 aa8.03□□□□□ -1.12
BRCA1-224ENST00000497488 RAB6BQ9NRW1 208 aa8.03□□□□□ -1.12
BRCA1-224ENST00000497488 COMMD10Q9Y6G5 202 aa8.03□□□□□ -1.12
BRCA1-224ENST00000497488 KCNQ2O43526 872 aa8.02□□□□□ -1.13
BRCA1-224ENST00000497488 GREM1O60565 184 aa8.02□□□□□ -1.13
BRCA1-224ENST00000497488 GADD45BO75293 160 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-224ENST00000497488 POU3F3P20264 500 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-224ENST00000497488 CCDC85BQ15834 202 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-224ENST00000497488 JMYQ8N9B5 988 aa8.02□□□□□ -1.13
BRCA1-224ENST00000497488 THAP3Q8WTV1 239 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-224ENST00000497488 L3MBTL2Q969R5 705 aa8.02□□□□□ -1.13
BRCA1-224ENST00000497488 RHOVQ96L33 236 aa8.02□□□□□ -1.13
BRCA1-224ENST00000497488 APBA2Q99767 749 aa8.02□□□□□ -1.13
BRCA1-224ENST00000497488 ST7Q9NRC1 585 aa8.02□□□□□ -1.13
BRCA1-224ENST00000497488 SUPT16HQ9Y5B9 1047 aaKnown RBP8.02□□□□□ -1.13
BRCA1-224ENST00000497488 LILRA1O75019 489 aa8.01□□□□□ -1.13
BRCA1-224ENST00000497488 IL2RAP01589 272 aa8.01□□□□□ -1.13
BRCA1-224ENST00000497488 GARTP22102 1010 aa8.01□□□□□ -1.13
BRCA1-224ENST00000497488 GRM2Q14416 872 aa8.01□□□□□ -1.13
BRCA1-224ENST00000497488 NFE2Q16621 373 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-224ENST00000497488 ZNF295-AS1Q8N0V1 137 aa8.01□□□□□ -1.13
BRCA1-224ENST00000497488 SYNPOQ8N3V7 929 aa8.01□□□□□ -1.13
BRCA1-224ENST00000497488 FAM169BQ8N8A8 192 aa8.01□□□□□ -1.13
BRCA1-224ENST00000497488 C3orf58Q8NDZ4 430 aa8.01□□□□□ -1.13
BRCA1-224ENST00000497488 FAM126AQ9BYI3 521 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-224ENST00000497488 SUV39H2Q9H5I1 410 aa8.01□□□□□ -1.13
BRCA1-224ENST00000497488 ARHGEF10LQ9HCE6 1279 aa8.01□□□□□ -1.13
BRCA1-224ENST00000497488 UBP1Q9NZI7 540 aa8.01□□□□□ -1.13
BRCA1-224ENST00000497488 MAPK8IP1Q9UQF2 711 aa8.01□□□□□ -1.13
BRCA1-224ENST00000497488 PLAAQ9Y263 795 aa8.01□□□□□ -1.13
BRCA1-224ENST00000497488 BCS1LQ9Y276 419 aa8.01□□□□□ -1.13
BRCA1-224ENST00000497488 TSPAN6O43657 245 aa8□□□□□ -1.13
BRCA1-224ENST00000497488 PLIN1O60240 522 aa8□□□□□ -1.13
BRCA1-224ENST00000497488 CAND2O75155 1236 aa8□□□□□ -1.13
BRCA1-224ENST00000497488 PHACTR2O75167 634 aa8□□□□□ -1.13
BRCA1-224ENST00000497488 MICAL2O94851 1124 aa8□□□□□ -1.13
BRCA1-224ENST00000497488 ITGBL1O95965 494 aaPredicted RBP8□□□□□ -1.13
BRCA1-224ENST00000497488 RLBP1P12271 317 aa8□□□□□ -1.13
BRCA1-224ENST00000497488 CNGA1P29973 690 aa8□□□□□ -1.13
BRCA1-224ENST00000497488 DHX9Q08211 1270 aaKnown RBP8□□□□□ -1.13
BRCA1-224ENST00000497488 ZFYVE27Q5T4F4 411 aa8□□□□□ -1.13
BRCA1-224ENST00000497488 C1orf53Q5VUE5 145 aa8□□□□□ -1.13
BRCA1-224ENST00000497488 CCDC81Q6ZN84 652 aa8□□□□□ -1.13
BRCA1-224ENST00000497488 C11orf96Q7Z7L8 435 aa8□□□□□ -1.13
BRCA1-224ENST00000497488 GALNT12Q8IXK2 581 aa8□□□□□ -1.13
BRCA1-224ENST00000497488 HRH3Q9Y5N1 445 aa8□□□□□ -1.13
BRCA1-224ENST00000497488 ASMTLO95671 621 aa7.99□□□□□ -1.13
BRCA1-224ENST00000497488 POLR3DP05423 398 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-224ENST00000497488 EPHB1P54762 984 aa7.99□□□□□ -1.13
BRCA1-224ENST00000497488 APOBRQ0VD83 1088 aa7.99□□□□□ -1.13
BRCA1-224ENST00000497488 OS9Q13438 667 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-224ENST00000497488 GRIN2CQ14957 1233 aa7.99□□□□□ -1.13
BRCA1-224ENST00000497488 LONRF3Q496Y0 759 aa7.99□□□□□ -1.13
BRCA1-224ENST00000497488 TJAP1Q5JTD0 557 aa7.99□□□□□ -1.13
BRCA1-224ENST00000497488 ZNF438Q7Z4V0 828 aa7.99□□□□□ -1.13
BRCA1-224ENST00000497488 PHC3Q8NDX5 983 aa7.99□□□□□ -1.13
BRCA1-224ENST00000497488 SLC39A13Q96H72 371 aa7.99□□□□□ -1.13
BRCA1-224ENST00000497488 BSDC1Q9NW68 430 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-224ENST00000497488 ACTR10Q9NZ32 417 aa7.99□□□□□ -1.13
BRCA1-224ENST00000497488 CABP1Q9NZU7 370 aa7.99□□□□□ -1.13
BRCA1-224ENST00000497488 CD2APQ9Y5K6 639 aa7.99□□□□□ -1.13
BRCA1-224ENST00000497488 PTCH2Q9Y6C5 1203 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms