RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 SERTAD1Q9UHV2 236 aa6.46□□□□□ -1.38
CMSS1-209ENST00000497345 ATXN7L1Q9ULK2 861 aaPredicted RBP6.46□□□□□ -1.38
CMSS1-209ENST00000497345 KNSTRNQ9Y448 316 aa6.46□□□□□ -1.38
CMSS1-209ENST00000497345 PCDHGA11Q9Y5H2 935 aa6.46□□□□□ -1.38
CMSS1-209ENST00000497345 TMEM229AB2RXF0 380 aa6.45□□□□□ -1.38
CMSS1-209ENST00000497345 PIK3CDO00329 1044 aa6.45□□□□□ -1.38
CMSS1-209ENST00000497345 CDK2AP1O14519 115 aa6.45□□□□□ -1.38
CMSS1-209ENST00000497345 BNIP3LO60238 219 aa6.45□□□□□ -1.38
CMSS1-209ENST00000497345 IGHA1P01876 353 aa6.45□□□□□ -1.38
CMSS1-209ENST00000497345 TNNT2P45379 298 aaPredicted RBP6.45□□□□□ -1.38
CMSS1-209ENST00000497345 FOXK2Q01167 660 aa6.45□□□□□ -1.38
CMSS1-209ENST00000497345 GPAT2Q6NUI2 795 aa6.45□□□□□ -1.38
CMSS1-209ENST00000497345 C1orf229Q6ZS94 237 aaPredicted RBP6.45□□□□□ -1.38
CMSS1-209ENST00000497345 TBC1D9Q6ZT07 1266 aa6.45□□□□□ -1.38
CMSS1-209ENST00000497345 PODNQ7Z5L7 613 aa6.45□□□□□ -1.38
CMSS1-209ENST00000497345 FAM9BQ8IZU0 186 aa6.45□□□□□ -1.38
CMSS1-209ENST00000497345 C1orf216Q8TAB5 229 aa6.45□□□□□ -1.38
CMSS1-209ENST00000497345 PRKRIP1Q9H875 184 aaPredicted RBP6.45□□□□□ -1.38
CMSS1-209ENST00000497345 MRS2Q9HD23 443 aa6.45□□□□□ -1.38
CMSS1-209ENST00000497345 NDFIP2Q9NV92 336 aa6.45□□□□□ -1.38
CMSS1-209ENST00000497345 ARHGAP23Q9P227 1491 aa6.45□□□□□ -1.38
CMSS1-209ENST00000497345 SLIT1O75093 1534 aa6.45□□□□□ -1.38
CMSS1-209ENST00000497345 SETD1AO15047 1707 aaKnown RBP6.45□□□□□ -1.38
CMSS1-209ENST00000497345 ROBO2Q9HCK4 1378 aa6.44□□□□□ -1.38
CMSS1-209ENST00000497345 PTPRUQ92729 1446 aa6.44□□□□□ -1.38
CMSS1-209ENST00000497345 A6NJY4 79 aa6.44□□□□□ -1.38
CMSS1-209ENST00000497345 C2CD2LO14523 706 aa6.44□□□□□ -1.38
CMSS1-209ENST00000497345 LZTS3O60299 673 aaPredicted RBP6.44□□□□□ -1.38
CMSS1-209ENST00000497345 SKIP12755 728 aa6.44□□□□□ -1.38
CMSS1-209ENST00000497345 KCNA6P17658 529 aa6.44□□□□□ -1.38
CMSS1-209ENST00000497345 MTFR1Q15390 333 aa6.44□□□□□ -1.38
CMSS1-209ENST00000497345 WWC1Q8IX03 1113 aa6.44□□□□□ -1.38
CMSS1-209ENST00000497345 EDARADDQ8WWZ3 215 aa6.44□□□□□ -1.38
CMSS1-209ENST00000497345 ABHD17AQ96GS6 310 aa6.44□□□□□ -1.38
CMSS1-209ENST00000497345 GDF2Q9UK05 429 aaPredicted RBP6.44□□□□□ -1.38
CMSS1-209ENST00000497345 TBX22Q9Y458 520 aa6.44□□□□□ -1.38
CMSS1-209ENST00000497345 TULP4Q9NRJ4 1543 aa6.44□□□□□ -1.38
CMSS1-209ENST00000497345 KTN1Q86UP2 1357 aaKnown RBP6.44□□□□□ -1.38
CMSS1-209ENST00000497345 ABCC11Q96J66 1382 aa6.44□□□□□ -1.38
CMSS1-209ENST00000497345 NPHP4O75161 1426 aaPredicted RBP6.43□□□□□ -1.38
CMSS1-209ENST00000497345 SHISA8B8ZZ34 492 aa6.43□□□□□ -1.38
CMSS1-209ENST00000497345 BMP4P12644 408 aa6.43□□□□□ -1.38
CMSS1-209ENST00000497345 FGFR3P22607 806 aa6.43□□□□□ -1.38
CMSS1-209ENST00000497345 CTBSQ01459 385 aa6.43□□□□□ -1.38
CMSS1-209ENST00000497345 EML3Q32P44 896 aa6.43□□□□□ -1.38
CMSS1-209ENST00000497345 FIGNL1Q6PIW4 674 aa6.43□□□□□ -1.38
CMSS1-209ENST00000497345 NLRP8Q86W28 1048 aa6.43□□□□□ -1.38
CMSS1-209ENST00000497345 POM121Q96HA1 1249 aa6.43□□□□□ -1.38
CMSS1-209ENST00000497345 DCAF5Q96JK2 942 aa6.43□□□□□ -1.38
CMSS1-209ENST00000497345 ZCCHC2Q9C0B9 1178 aaKnown RBP6.43□□□□□ -1.38
CMSS1-209ENST00000497345 DNAAF2Q9NVR5 837 aaKnown RBP6.43□□□□□ -1.38
CMSS1-209ENST00000497345 CABP1Q9NZU7 370 aa6.43□□□□□ -1.38
CMSS1-209ENST00000497345 IQSEC3Q9UPP2 1182 aaPredicted RBP6.43□□□□□ -1.38
CMSS1-209ENST00000497345 NOD1Q9Y239 953 aa6.43□□□□□ -1.38
CMSS1-209ENST00000497345 PCDHGC4Q9Y5F7 938 aa6.43□□□□□ -1.38
CMSS1-209ENST00000497345 SETD1BQ9UPS6 1966 aaKnown RBP6.43□□□□□ -1.38
CMSS1-209ENST00000497345 ZNF142P52746 1687 aaPredicted RBP6.42□□□□□ -1.38
CMSS1-209ENST00000497345 CCER2I3L3R5 266 aa6.42□□□□□ -1.38
CMSS1-209ENST00000497345 ATP4AP20648 1035 aa6.42□□□□□ -1.38
CMSS1-209ENST00000497345 SNRPNP63162 240 aaKnown RBP6.42□□□□□ -1.38
CMSS1-209ENST00000497345 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.42□□□□□ -1.38
CMSS1-209ENST00000497345 ZNF295-AS1Q8N0V1 137 aa6.42□□□□□ -1.38
CMSS1-209ENST00000497345 GOLGA6L1Q8N7Z2 621 aa6.42□□□□□ -1.38
CMSS1-209ENST00000497345 NFATC2IPQ8NCF5 419 aa6.42□□□□□ -1.38
CMSS1-209ENST00000497345 NUDT16Q96DE0 195 aaKnown RBP6.42□□□□□ -1.38
CMSS1-209ENST00000497345 NSD3Q9BZ95 1437 aa6.42□□□□□ -1.38
CMSS1-209ENST00000497345 A0A1W2PNR3 127 aa6.41□□□□□ -1.38
CMSS1-209ENST00000497345 BACH1O14867 736 aa6.41□□□□□ -1.38
CMSS1-209ENST00000497345 ATXN7O15265 892 aaPredicted RBP6.41□□□□□ -1.38
CMSS1-209ENST00000497345 RAD21O60216 631 aa6.41□□□□□ -1.38
CMSS1-209ENST00000497345 ARSJQ5FYB0 599 aaPredicted RBP6.41□□□□□ -1.38
CMSS1-209ENST00000497345 HDGFL2Q7Z4V5 671 aaPredicted RBP6.41□□□□□ -1.38
CMSS1-209ENST00000497345 MORC1Q86VD1 984 aa6.41□□□□□ -1.38
CMSS1-209ENST00000497345 PROSER2Q86WR7 435 aaPredicted RBP6.41□□□□□ -1.38
CMSS1-209ENST00000497345 PMFBP1Q8TBY8 1022 aa6.41□□□□□ -1.38
CMSS1-209ENST00000497345 GGA1Q9UJY5 639 aa6.41□□□□□ -1.38
CMSS1-209ENST00000497345 USP3Q9Y6I4 520 aa6.41□□□□□ -1.38
CMSS1-209ENST00000497345 MYOM1P52179 1685 aa6.41□□□□□ -1.38
CMSS1-209ENST00000497345 DLC1Q96QB1 1528 aa6.4□□□□□ -1.38
CMSS1-209ENST00000497345 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.4□□□□□ -1.38
CMSS1-209ENST00000497345 GTF2IP78347 998 aa6.4□□□□□ -1.38
CMSS1-209ENST00000497345 NCOA4Q13772 614 aa6.4□□□□□ -1.38
CMSS1-209ENST00000497345 RALBP1Q15311 655 aa6.4□□□□□ -1.38
CMSS1-209ENST00000497345 PLA2G4EQ3MJ16 856 aa6.4□□□□□ -1.38
CMSS1-209ENST00000497345 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.4□□□□□ -1.38
CMSS1-209ENST00000497345 ZIC5Q96T25 663 aa6.4□□□□□ -1.38
CMSS1-209ENST00000497345 GGNBP2Q9H3C7 697 aa6.4□□□□□ -1.38
CMSS1-209ENST00000497345 TERF2IPQ9NYB0 399 aa6.4□□□□□ -1.38
CMSS1-209ENST00000497345 ZDHHC3Q9NYG2 299 aa6.4□□□□□ -1.38
CMSS1-209ENST00000497345 MKL2Q9ULH7 1088 aa6.4□□□□□ -1.38
CMSS1-209ENST00000497345 SBNO2Q9Y2G9 1366 aa6.4□□□□□ -1.39
CMSS1-209ENST00000497345 PPIP5K1Q6PFW1 1433 aa6.4□□□□□ -1.39
CMSS1-209ENST00000497345 MED14O60244 1454 aa6.4□□□□□ -1.39
CMSS1-209ENST00000497345 LOC100996750A0A140TA64 210 aa6.39□□□□□ -1.39
CMSS1-209ENST00000497345 CENPBP07199 599 aaPredicted RBP6.39□□□□□ -1.39
CMSS1-209ENST00000497345 TATP17735 454 aaPredicted RBP6.39□□□□□ -1.39
CMSS1-209ENST00000497345 PPP2R1AP30153 589 aa6.39□□□□□ -1.39
CMSS1-209ENST00000497345 HNRNPUQ00839 825 aaKnown RBP eCLIP6.39□□□□□ -1.39
CMSS1-209ENST00000497345 TNP2Q05952 138 aa6.39□□□□□ -1.39
CMSS1-209ENST00000497345 FLIIQ13045 1269 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms