RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ARAP2Q8WZ64 1704 aa15.57■□□□□ 0.08
GARNL3-220ENST00000496711 F13A1P00488 732 aa15.57■□□□□ 0.08
GARNL3-220ENST00000496711 CHGBP05060 677 aa15.57■□□□□ 0.08
GARNL3-220ENST00000496711 CSF1RP07333 972 aa15.57■□□□□ 0.08
GARNL3-220ENST00000496711 TMEM87AQ8NBN3 555 aa15.57■□□□□ 0.08
GARNL3-220ENST00000496711 SYTL4Q96C24 671 aaPredicted RBP15.57■□□□□ 0.08
GARNL3-220ENST00000496711 CDCA7Q9BWT1 371 aaPredicted RBP15.57■□□□□ 0.08
GARNL3-220ENST00000496711 AKAP2Q9Y2D5 859 aa15.57■□□□□ 0.08
GARNL3-220ENST00000496711 IFIT5Q13325 482 aaKnown RBP15.56■□□□□ 0.08
GARNL3-220ENST00000496711 TAF7LQ5H9L4 462 aa15.56■□□□□ 0.08
GARNL3-220ENST00000496711 NLRP10Q86W26 655 aa15.56■□□□□ 0.08
GARNL3-220ENST00000496711 TMEM63CQ9P1W3 806 aa15.56■□□□□ 0.08
GARNL3-220ENST00000496711 NSFL1CQ9UNZ2 370 aaKnown RBP15.56■□□□□ 0.08
GARNL3-220ENST00000496711 ZBTB1Q9Y2K1 713 aa15.56■□□□□ 0.08
GARNL3-220ENST00000496711 ATP6V1DQ9Y5K8 247 aa15.56■□□□□ 0.08
GARNL3-220ENST00000496711 LAMB2P55268 1798 aa15.55■□□□□ 0.08
GARNL3-220ENST00000496711 AKAP11Q9UKA4 1901 aa15.55■□□□□ 0.08
GARNL3-220ENST00000496711 COL9A3Q14050 684 aaPredicted RBP15.55■□□□□ 0.08
GARNL3-220ENST00000496711 TOB2Q14106 344 aaPredicted RBP15.55■□□□□ 0.08
GARNL3-220ENST00000496711 HLFQ16534 295 aa15.55■□□□□ 0.08
GARNL3-220ENST00000496711 GPTP24298 496 aa15.54■□□□□ 0.08
GARNL3-220ENST00000496711 NASPP49321 788 aaPredicted RBP15.54■□□□□ 0.08
GARNL3-220ENST00000496711 FOXD4L6Q3SYB3 417 aaPredicted RBP15.54■□□□□ 0.08
GARNL3-220ENST00000496711 ZMYM1Q5SVZ6 1142 aa15.54■□□□□ 0.08
GARNL3-220ENST00000496711 FOXD4L3Q6VB84 417 aaPredicted RBP15.54■□□□□ 0.08
GARNL3-220ENST00000496711 NECAB1Q8N987 351 aa15.54■□□□□ 0.08
GARNL3-220ENST00000496711 TCEANC2Q96MN5 208 aa15.54■□□□□ 0.08
GARNL3-220ENST00000496711 ABCC12Q96J65 1359 aa15.54■□□□□ 0.08
GARNL3-220ENST00000496711 CYP21A2P08686 494 aa15.54■□□□□ 0.08
GARNL3-220ENST00000496711 IL6STP40189 918 aaPredicted RBP15.54■□□□□ 0.08
GARNL3-220ENST00000496711 CCDC158Q5M9N0 1113 aa15.54■□□□□ 0.08
GARNL3-220ENST00000496711 TTC39AQ5SRH9 613 aa15.54■□□□□ 0.08
GARNL3-220ENST00000496711 SYAP1Q96A49 352 aaPredicted RBP15.54■□□□□ 0.08
GARNL3-220ENST00000496711 CCDC85AQ96PX6 553 aaPredicted RBP15.54■□□□□ 0.08
GARNL3-220ENST00000496711 NEK1Q96PY6 1258 aa15.54■□□□□ 0.08
GARNL3-220ENST00000496711 DSCC1Q9BVC3 393 aa15.54■□□□□ 0.08
GARNL3-220ENST00000496711 MTMR6Q9Y217 621 aa15.54■□□□□ 0.08
GARNL3-220ENST00000496711 SPATA31A1Q5TZJ5 1347 aa15.53■□□□□ 0.08
GARNL3-220ENST00000496711 RNF113AO15541 343 aaKnown RBP15.53■□□□□ 0.08
GARNL3-220ENST00000496711 PDIA4P13667 645 aaKnown RBP15.53■□□□□ 0.08
GARNL3-220ENST00000496711 PRIM1P49642 420 aaKnown RBP15.53■□□□□ 0.08
GARNL3-220ENST00000496711 CTSWP56202 376 aa15.53■□□□□ 0.08
GARNL3-220ENST00000496711 GORABQ5T7V8 394 aa15.53■□□□□ 0.08
GARNL3-220ENST00000496711 USP48Q86UV5 1035 aa15.53■□□□□ 0.08
GARNL3-220ENST00000496711 XAGE2Q96GT9 111 aa15.53■□□□□ 0.08
GARNL3-220ENST00000496711 GDPD2Q9HCC8 539 aa15.53■□□□□ 0.08
GARNL3-220ENST00000496711 THRAP3Q9Y2W1 955 aaKnown RBP15.53■□□□□ 0.08
GARNL3-220ENST00000496711 MAST3O60307 1309 aa15.53■□□□□ 0.08
GARNL3-220ENST00000496711 ERVV-1B6SEH8 477 aa15.52■□□□□ 0.08
GARNL3-220ENST00000496711 LRRFIP1Q32MZ4 808 aaKnown RBP15.52■□□□□ 0.08
GARNL3-220ENST00000496711 LRSAM1Q6UWE0 723 aa15.52■□□□□ 0.08
GARNL3-220ENST00000496711 CNPY2Q9Y2B0 182 aa15.52■□□□□ 0.08
GARNL3-220ENST00000496711 COL5A3P25940 1745 aaPredicted RBP15.52■□□□□ 0.08
GARNL3-220ENST00000496711 DDX60Q8IY21 1712 aaKnown RBP15.52■□□□□ 0.08
GARNL3-220ENST00000496711 MYH15Q9Y2K3 1946 aa15.52■□□□□ 0.08
GARNL3-220ENST00000496711 ADORA1P30542 326 aa15.52■□□□□ 0.07
GARNL3-220ENST00000496711 DZIP3Q86Y13 1208 aaKnown RBP15.52■□□□□ 0.07
GARNL3-220ENST00000496711 TTLL11Q8NHH1 800 aa15.52■□□□□ 0.07
GARNL3-220ENST00000496711 SLIT2O94813 1529 aa15.52■□□□□ 0.07
GARNL3-220ENST00000496711 BCORQ6W2J9 1755 aa15.51■□□□□ 0.07
GARNL3-220ENST00000496711 SYCE3A1L190 88 aa15.51■□□□□ 0.07
GARNL3-220ENST00000496711 ANKRD18BA2A2Z9 1011 aa15.51■□□□□ 0.07
GARNL3-220ENST00000496711 VPS37CA5D8V6 355 aaPredicted RBP15.51■□□□□ 0.07
GARNL3-220ENST00000496711 IRS4O14654 1257 aaPredicted RBP15.51■□□□□ 0.07
GARNL3-220ENST00000496711 GADD45BO75293 160 aaPredicted RBP15.51■□□□□ 0.07
GARNL3-220ENST00000496711 PDCP20941 246 aa15.51■□□□□ 0.07
GARNL3-220ENST00000496711 ITGA6P23229 1130 aa15.51■□□□□ 0.07
GARNL3-220ENST00000496711 DDB1Q16531 1140 aa15.51■□□□□ 0.07
GARNL3-220ENST00000496711 SYNE4Q8N205 404 aa15.51■□□□□ 0.07
GARNL3-220ENST00000496711 GREM2Q9H772 168 aa15.51■□□□□ 0.07
GARNL3-220ENST00000496711 MYO5AQ9Y4I1 1855 aaKnown RBP15.51■□□□□ 0.07
GARNL3-220ENST00000496711 ADAMTS2O95450 1211 aa15.5■□□□□ 0.07
GARNL3-220ENST00000496711 HMGB1P09429 215 aaKnown RBP15.5■□□□□ 0.07
GARNL3-220ENST00000496711 CCDC173Q0VFZ6 552 aa15.5■□□□□ 0.07
GARNL3-220ENST00000496711 ATP2B3Q16720 1220 aa15.5■□□□□ 0.07
GARNL3-220ENST00000496711 CSPP1Q1MSJ5 1256 aa15.5■□□□□ 0.07
GARNL3-220ENST00000496711 SLFNL1Q499Z3 407 aa15.5■□□□□ 0.07
GARNL3-220ENST00000496711 METTL24Q5JXM2 366 aa15.5■□□□□ 0.07
GARNL3-220ENST00000496711 ANP32BQ92688 251 aaKnown RBP15.5■□□□□ 0.07
GARNL3-220ENST00000496711 TRMT112Q9UI30 125 aaKnown RBP15.5■□□□□ 0.07
GARNL3-220ENST00000496711 MYH14Q7Z406 1995 aaKnown RBP15.5■□□□□ 0.07
GARNL3-220ENST00000496711 ZNF831Q5JPB2 1677 aa15.5■□□□□ 0.07
GARNL3-220ENST00000496711 FKBP4Q02790 459 aaKnown RBP eCLIP15.5■□□□□ 0.07
GARNL3-220ENST00000496711 Q6ZUG5 572 aa15.5■□□□□ 0.07
GARNL3-220ENST00000496711 RIPOR2Q9Y4F9 1068 aa15.5■□□□□ 0.07
GARNL3-220ENST00000496711 UBN2Q6ZU65 1347 aa15.49■□□□□ 0.07
GARNL3-220ENST00000496711 M0R2C6 588 aa15.49■□□□□ 0.07
GARNL3-220ENST00000496711 PDE8AO60658 829 aa15.49■□□□□ 0.07
GARNL3-220ENST00000496711 PHF14O94880 888 aa15.49■□□□□ 0.07
GARNL3-220ENST00000496711 ZFYP08048 801 aaPredicted RBP15.49■□□□□ 0.07
GARNL3-220ENST00000496711 HSPD1P10809 573 aaKnown RBP15.49■□□□□ 0.07
GARNL3-220ENST00000496711 LARP1BQ659C4 914 aaKnown RBP15.49■□□□□ 0.07
GARNL3-220ENST00000496711 LDHAL6AQ6ZMR3 332 aa15.49■□□□□ 0.07
GARNL3-220ENST00000496711 STOX1Q6ZVD7 989 aa15.49■□□□□ 0.07
GARNL3-220ENST00000496711 GTF3C6Q969F1 213 aa15.49■□□□□ 0.07
GARNL3-220ENST00000496711 RBSNQ9H1K0 784 aa15.49■□□□□ 0.07
GARNL3-220ENST00000496711 TBC1D2BQ9UPU7 963 aa15.49■□□□□ 0.07
GARNL3-220ENST00000496711 CASZ1Q86V15 1759 aa15.48■□□□□ 0.07
GARNL3-220ENST00000496711 FIBPO43427 364 aa15.48■□□□□ 0.07
GARNL3-220ENST00000496711 HSP90B1P14625 803 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms