RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 UPF2Q9HAU5 1272 aaKnown RBP10.53□□□□□ -0.72
U2AF1-212ENST00000496462 CASZ1Q86V15 1759 aa10.53□□□□□ -0.72
U2AF1-212ENST00000496462 LDHCP07864 332 aa10.53□□□□□ -0.72
U2AF1-212ENST00000496462 BSDC1Q9NW68 430 aaPredicted RBP10.53□□□□□ -0.72
U2AF1-212ENST00000496462 NBPF7P0C2Y1 421 aaPredicted RBP10.52□□□□□ -0.72
U2AF1-212ENST00000496462 PUM3Q15397 648 aaKnown RBP10.52□□□□□ -0.72
U2AF1-212ENST00000496462 TTLL11Q8NHH1 800 aa10.52□□□□□ -0.72
U2AF1-212ENST00000496462 B4GALNT3Q6L9W6 998 aa10.52□□□□□ -0.73
U2AF1-212ENST00000496462 UBE4AQ14139 1066 aa10.52□□□□□ -0.73
U2AF1-212ENST00000496462 PRPF40BQ6NWY9 871 aaKnown RBP10.52□□□□□ -0.73
U2AF1-212ENST00000496462 AACSQ86V21 672 aa10.51□□□□□ -0.73
U2AF1-212ENST00000496462 ZBTB7BO15156 539 aaPredicted RBP10.51□□□□□ -0.73
U2AF1-212ENST00000496462 C21orf2O43822 256 aa10.51□□□□□ -0.73
U2AF1-212ENST00000496462 CIAO1O76071 339 aa10.51□□□□□ -0.73
U2AF1-212ENST00000496462 TRIM34Q9BYJ4 488 aa10.51□□□□□ -0.73
U2AF1-212ENST00000496462 MYO1BO43795 1136 aa10.51□□□□□ -0.73
U2AF1-212ENST00000496462 LPIN2Q92539 896 aa10.51□□□□□ -0.73
U2AF1-212ENST00000496462 VPS33BQ9H267 617 aa10.51□□□□□ -0.73
U2AF1-212ENST00000496462 GREM2Q9H772 168 aa10.51□□□□□ -0.73
U2AF1-212ENST00000496462 BCL2L12Q9HB09 334 aa10.51□□□□□ -0.73
U2AF1-212ENST00000496462 MAST3O60307 1309 aa10.51□□□□□ -0.73
U2AF1-212ENST00000496462 TRIM6-TRIM34B2RNG4 842 aa10.5□□□□□ -0.73
U2AF1-212ENST00000496462 GSTO1P78417 241 aa10.5□□□□□ -0.73
U2AF1-212ENST00000496462 TBC1D22AQ8WUA7 517 aa10.5□□□□□ -0.73
U2AF1-212ENST00000496462 ATP6V0A2Q9Y487 856 aa10.5□□□□□ -0.73
U2AF1-212ENST00000496462 SRGNP10124 158 aa10.5□□□□□ -0.73
U2AF1-212ENST00000496462 CHAF1AQ13111 956 aaPredicted RBP10.5□□□□□ -0.73
U2AF1-212ENST00000496462 TTF1Q15361 905 aaPredicted RBP10.5□□□□□ -0.73
U2AF1-212ENST00000496462 HOXA10P31260 410 aaPredicted RBP10.5□□□□□ -0.73
U2AF1-212ENST00000496462 HIBADHP31937 336 aaKnown RBP10.5□□□□□ -0.73
U2AF1-212ENST00000496462 RBM5P52756 815 aaKnown RBP eCLIP10.5□□□□□ -0.73
U2AF1-212ENST00000496462 KIAA1211Q6ZU35 1233 aa10.5□□□□□ -0.73
U2AF1-212ENST00000496462 RUFY2Q8WXA3 655 aa10.5□□□□□ -0.73
U2AF1-212ENST00000496462 COPRSQ9NQ92 184 aa10.5□□□□□ -0.73
U2AF1-212ENST00000496462 HIP1O00291 1037 aa10.5□□□□□ -0.73
U2AF1-212ENST00000496462 MFAP1P55081 439 aaKnown RBP10.5□□□□□ -0.73
U2AF1-212ENST00000496462 ZBTB40Q9NUA8 1239 aa10.5□□□□□ -0.73
U2AF1-212ENST00000496462 DENND2AQ9ULE3 1009 aa10.5□□□□□ -0.73
U2AF1-212ENST00000496462 UBN2Q6ZU65 1347 aa10.49□□□□□ -0.73
U2AF1-212ENST00000496462 RIMBP2O15034 1052 aa10.49□□□□□ -0.73
U2AF1-212ENST00000496462 CEP85Q6P2H3 762 aa10.49□□□□□ -0.73
U2AF1-212ENST00000496462 LRP2BPQ9P2M1 347 aa10.49□□□□□ -0.73
U2AF1-212ENST00000496462 MYH14Q7Z406 1995 aaKnown RBP10.49□□□□□ -0.73
U2AF1-212ENST00000496462 EXOC6BQ9Y2D4 811 aa10.49□□□□□ -0.73
U2AF1-212ENST00000496462 ZNF804BA4D1E1 1349 aa10.48□□□□□ -0.73
U2AF1-212ENST00000496462 H7C1D1 291 aa10.48□□□□□ -0.73
U2AF1-212ENST00000496462 DZIP1Q86YF9 867 aaKnown RBP10.48□□□□□ -0.73
U2AF1-212ENST00000496462 ZNF784Q8NCA9 323 aaPredicted RBP10.48□□□□□ -0.73
U2AF1-212ENST00000496462 WDR66Q8TBY9 1149 aa10.48□□□□□ -0.73
U2AF1-212ENST00000496462 TAF1LQ8IZX4 1826 aa10.48□□□□□ -0.73
U2AF1-212ENST00000496462 CHRNDQ07001 517 aa10.48□□□□□ -0.73
U2AF1-212ENST00000496462 SYNE4Q8N205 404 aa10.48□□□□□ -0.73
U2AF1-212ENST00000496462 TUBGCP6Q96RT7 1819 aa10.48□□□□□ -0.73
U2AF1-212ENST00000496462 CSF1RP07333 972 aa10.48□□□□□ -0.73
U2AF1-212ENST00000496462 FKBP4Q02790 459 aaKnown RBP eCLIP10.48□□□□□ -0.73
U2AF1-212ENST00000496462 MAP3K12Q12852 859 aa10.48□□□□□ -0.73
U2AF1-212ENST00000496462 RHPN1Q8TCX5 695 aa10.48□□□□□ -0.73
U2AF1-212ENST00000496462 RAI14Q9P0K7 980 aa10.48□□□□□ -0.73
U2AF1-212ENST00000496462 DLG5Q8TDM6 1919 aa10.48□□□□□ -0.73
U2AF1-212ENST00000496462 KDM2BQ8NHM5 1336 aa10.48□□□□□ -0.73
U2AF1-212ENST00000496462 SEMA3EO15041 775 aa10.47□□□□□ -0.73
U2AF1-212ENST00000496462 LMNB1P20700 586 aa10.47□□□□□ -0.73
U2AF1-212ENST00000496462 CNTROBQ8N137 903 aa10.47□□□□□ -0.73
U2AF1-212ENST00000496462 SSH3Q8TE77 659 aa10.47□□□□□ -0.73
U2AF1-212ENST00000496462 COA1Q9GZY4 146 aa10.47□□□□□ -0.73
U2AF1-212ENST00000496462 GPR108Q9NPR9 543 aa10.47□□□□□ -0.73
U2AF1-212ENST00000496462 RNF181Q9P0P0 153 aa10.47□□□□□ -0.73
U2AF1-212ENST00000496462 GJA3Q9Y6H8 435 aa10.47□□□□□ -0.73
U2AF1-212ENST00000496462 UTYO14607 1347 aa10.47□□□□□ -0.73
U2AF1-212ENST00000496462 GLRX3O76003 335 aaKnown RBP10.47□□□□□ -0.73
U2AF1-212ENST00000496462 HDAC1Q13547 482 aaPredicted RBP10.47□□□□□ -0.73
U2AF1-212ENST00000496462 UBR3Q6ZT12 1888 aa10.47□□□□□ -0.73
U2AF1-212ENST00000496462 CERS3Q8IU89 383 aa10.47□□□□□ -0.73
U2AF1-212ENST00000496462 SEC31BQ9NQW1 1179 aa10.47□□□□□ -0.73
U2AF1-212ENST00000496462 CICQ96RK0 1608 aaPredicted RBP10.47□□□□□ -0.73
U2AF1-212ENST00000496462 RTL9Q8NET4 1388 aa10.47□□□□□ -0.73
U2AF1-212ENST00000496462 MTX1Q13505 466 aa10.47□□□□□ -0.73
U2AF1-212ENST00000496462 DIAPH3Q9NSV4 1193 aa10.47□□□□□ -0.73
U2AF1-212ENST00000496462 MYO3BQ8WXR4 1341 aa10.46□□□□□ -0.73
U2AF1-212ENST00000496462 RLBP1P12271 317 aa10.46□□□□□ -0.73
U2AF1-212ENST00000496462 RGS3P49796 1198 aa10.46□□□□□ -0.73
U2AF1-212ENST00000496462 PODNQ7Z5L7 613 aa10.46□□□□□ -0.73
U2AF1-212ENST00000496462 HELBQ8NG08 1087 aaPredicted RBP10.46□□□□□ -0.73
U2AF1-212ENST00000496462 GPBP1L1Q9HC44 474 aaPredicted RBP10.46□□□□□ -0.73
U2AF1-212ENST00000496462 ABCF2Q9UG63 623 aa10.46□□□□□ -0.73
U2AF1-212ENST00000496462 CLEC11AQ9Y240 323 aa10.46□□□□□ -0.73
U2AF1-212ENST00000496462 PDE8BO95263 885 aa10.46□□□□□ -0.73
U2AF1-212ENST00000496462 BAG3O95817 575 aa10.46□□□□□ -0.73
U2AF1-212ENST00000496462 RABL6Q3YEC7 729 aaPredicted RBP10.46□□□□□ -0.73
U2AF1-212ENST00000496462 CIAPIN1Q6FI81 312 aa10.46□□□□□ -0.73
U2AF1-212ENST00000496462 IQCA1LA6NCM1 817 aa10.46□□□□□ -0.74
U2AF1-212ENST00000496462 ZNF594Q96JF6 807 aaPredicted RBP10.46□□□□□ -0.74
U2AF1-212ENST00000496462 DNAJC2Q99543 621 aaKnown RBP10.46□□□□□ -0.74
U2AF1-212ENST00000496462 GTF3C3Q9Y5Q9 886 aa10.46□□□□□ -0.74
U2AF1-212ENST00000496462 IGSF3O75054 1194 aa10.45□□□□□ -0.74
U2AF1-212ENST00000496462 MCCP23508 829 aa10.45□□□□□ -0.74
U2AF1-212ENST00000496462 NF2P35240 595 aa10.45□□□□□ -0.74
U2AF1-212ENST00000496462 IARSP41252 1262 aaKnown RBP10.45□□□□□ -0.74
U2AF1-212ENST00000496462 MMP14P50281 582 aa10.45□□□□□ -0.74
U2AF1-212ENST00000496462 ERICH6Q7L0X2 663 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms