RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 HIP1O00291 1037 aa19.85■□□□□ 0.77
HLA-A-208ENST00000496081 PLSCR1O15162 318 aa19.85■□□□□ 0.77
HLA-A-208ENST00000496081 PDE8BO95263 885 aa19.85■□□□□ 0.77
HLA-A-208ENST00000496081 APBA3O96018 575 aa19.85■□□□□ 0.77
HLA-A-208ENST00000496081 ADORA1P30542 326 aa19.85■□□□□ 0.77
HLA-A-208ENST00000496081 ATP2B3Q16720 1220 aa19.85■□□□□ 0.77
HLA-A-208ENST00000496081 NBPF5PQ86XG9 351 aaPredicted RBP19.85■□□□□ 0.77
HLA-A-208ENST00000496081 RUFY2Q8WXA3 655 aa19.85■□□□□ 0.77
HLA-A-208ENST00000496081 DNAJC2Q99543 621 aaKnown RBP19.85■□□□□ 0.77
HLA-A-208ENST00000496081 EPB41L2O43491 1005 aaKnown RBP19.85■□□□□ 0.77
HLA-A-208ENST00000496081 MPHOSPH8Q99549 860 aa19.85■□□□□ 0.77
HLA-A-208ENST00000496081 MROH5Q6ZUA9 1318 aa19.84■□□□□ 0.77
HLA-A-208ENST00000496081 SSFA2P28290 1259 aa19.84■□□□□ 0.77
HLA-A-208ENST00000496081 TPTE2Q6XPS3 522 aa19.84■□□□□ 0.77
HLA-A-208ENST00000496081 SNX21Q969T3 373 aa19.84■□□□□ 0.77
HLA-A-208ENST00000496081 SPEF2Q9C093 1822 aa19.84■□□□□ 0.77
HLA-A-208ENST00000496081 NMIQ13287 307 aaPredicted RBP19.83■□□□□ 0.77
HLA-A-208ENST00000496081 CCDC158Q5M9N0 1113 aa19.83■□□□□ 0.77
HLA-A-208ENST00000496081 GORABQ5T7V8 394 aa19.83■□□□□ 0.77
HLA-A-208ENST00000496081 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.83■□□□□ 0.77
HLA-A-208ENST00000496081 COL4A1P02462 1669 aa19.83■□□□□ 0.77
HLA-A-208ENST00000496081 IFIT1P09914 478 aaKnown RBP19.83■□□□□ 0.76
HLA-A-208ENST00000496081 IGHMBP2P38935 993 aaKnown RBP19.83■□□□□ 0.76
HLA-A-208ENST00000496081 NFIXQ14938 502 aa19.83■□□□□ 0.76
HLA-A-208ENST00000496081 FAM227BQ96M60 508 aa19.83■□□□□ 0.76
HLA-A-208ENST00000496081 LSG1Q9H089 658 aaKnown RBP19.83■□□□□ 0.76
HLA-A-208ENST00000496081 TNS1Q9HBL0 1735 aaKnown RBP19.82■□□□□ 0.76
HLA-A-208ENST00000496081 HMGB2P26583 209 aaKnown RBP19.82■□□□□ 0.76
HLA-A-208ENST00000496081 SF3B2Q13435 895 aaKnown RBP19.82■□□□□ 0.76
HLA-A-208ENST00000496081 RABEP1Q15276 862 aa19.82■□□□□ 0.76
HLA-A-208ENST00000496081 DDX46Q7L014 1031 aaKnown RBP19.82■□□□□ 0.76
HLA-A-208ENST00000496081 HELBQ8NG08 1087 aaPredicted RBP19.82■□□□□ 0.76
HLA-A-208ENST00000496081 UPF1Q92900 1129 aaKnown RBP eCLIP19.82■□□□□ 0.76
HLA-A-208ENST00000496081 PAG1Q9NWQ8 432 aa19.82■□□□□ 0.76
HLA-A-208ENST00000496081 GYS1P13807 737 aa19.81■□□□□ 0.76
HLA-A-208ENST00000496081 MCCP23508 829 aa19.81■□□□□ 0.76
HLA-A-208ENST00000496081 TTC39AQ5SRH9 613 aa19.81■□□□□ 0.76
HLA-A-208ENST00000496081 CDC5LQ99459 802 aaKnown RBP19.81■□□□□ 0.76
HLA-A-208ENST00000496081 RAD50Q92878 1312 aa19.81■□□□□ 0.76
HLA-A-208ENST00000496081 RFX7Q2KHR2 1363 aa19.81■□□□□ 0.76
HLA-A-208ENST00000496081 CARMIL3Q8ND23 1372 aa19.81■□□□□ 0.76
HLA-A-208ENST00000496081 GOLIM4O00461 696 aa19.8■□□□□ 0.76
HLA-A-208ENST00000496081 FGFR2P21802 821 aa19.8■□□□□ 0.76
HLA-A-208ENST00000496081 PUM3Q15397 648 aaKnown RBP19.8■□□□□ 0.76
HLA-A-208ENST00000496081 KIAA1211Q6ZU35 1233 aa19.8■□□□□ 0.76
HLA-A-208ENST00000496081 HSCBQ8IWL3 235 aa19.8■□□□□ 0.76
HLA-A-208ENST00000496081 CCDC24Q8N4L8 307 aa19.8■□□□□ 0.76
HLA-A-208ENST00000496081 KBTBD3Q8NAB2 608 aa19.8■□□□□ 0.76
HLA-A-208ENST00000496081 NLRP3Q96P20 1036 aa19.8■□□□□ 0.76
HLA-A-208ENST00000496081 SNRKQ9NRH2 765 aa19.8■□□□□ 0.76
HLA-A-208ENST00000496081 TAF1P21675 1872 aa19.8■□□□□ 0.76
HLA-A-208ENST00000496081 A0A0D9SFI3 127 aa19.8■□□□□ 0.76
HLA-A-208ENST00000496081 DEFB132Q7Z7B7 95 aa19.8■□□□□ 0.76
HLA-A-208ENST00000496081 PALD1Q9ULE6 856 aa19.8■□□□□ 0.76
HLA-A-208ENST00000496081 TAF5LO75529 589 aa19.79■□□□□ 0.76
HLA-A-208ENST00000496081 CD2BP2O95400 341 aaKnown RBP19.79■□□□□ 0.76
HLA-A-208ENST00000496081 HSPA4P34932 840 aa19.79■□□□□ 0.76
HLA-A-208ENST00000496081 EN1Q05925 392 aaPredicted RBP19.79■□□□□ 0.76
HLA-A-208ENST00000496081 LPIN2Q92539 896 aa19.79■□□□□ 0.76
HLA-A-208ENST00000496081 ANAPC15P60006 121 aa19.78■□□□□ 0.76
HLA-A-208ENST00000496081 ANKRD18AQ8IVF6 992 aa19.78■□□□□ 0.76
HLA-A-208ENST00000496081 ARAP2Q8WZ64 1704 aa19.78■□□□□ 0.76
HLA-A-208ENST00000496081 IL17RAQ96F46 866 aa19.78■□□□□ 0.76
HLA-A-208ENST00000496081 MED23Q9ULK4 1368 aa19.78■□□□□ 0.76
HLA-A-208ENST00000496081 PTH1RQ03431 593 aa19.78■□□□□ 0.76
HLA-A-208ENST00000496081 SCARF1Q14162 830 aa19.78■□□□□ 0.76
HLA-A-208ENST00000496081 ZNF512BQ96KM6 892 aaPredicted RBP19.78■□□□□ 0.76
HLA-A-208ENST00000496081 ANTXR1Q9H6X2 564 aa19.78■□□□□ 0.76
HLA-A-208ENST00000496081 CHGBP05060 677 aa19.77■□□□□ 0.76
HLA-A-208ENST00000496081 CHRNDQ07001 517 aa19.77■□□□□ 0.76
HLA-A-208ENST00000496081 ZNF827Q17R98 1081 aa19.77■□□□□ 0.76
HLA-A-208ENST00000496081 AKT1S1Q96B36 256 aa19.77■□□□□ 0.76
HLA-A-208ENST00000496081 BSDC1Q9NW68 430 aaPredicted RBP19.77■□□□□ 0.76
HLA-A-208ENST00000496081 SNAP23O00161 211 aa19.76■□□□□ 0.75
HLA-A-208ENST00000496081 NPHP1O15259 732 aa19.76■□□□□ 0.75
HLA-A-208ENST00000496081 TM4SF1P30408 202 aa19.76■□□□□ 0.75
HLA-A-208ENST00000496081 FKBP4Q02790 459 aaKnown RBP eCLIP19.76■□□□□ 0.75
HLA-A-208ENST00000496081 EZH2Q15910 746 aaKnown RBP19.76■□□□□ 0.75
HLA-A-208ENST00000496081 TICAM2Q86XR7 235 aa19.76■□□□□ 0.75
HLA-A-208ENST00000496081 CELF1Q92879 486 aaKnown RBP19.76■□□□□ 0.75
HLA-A-208ENST00000496081 TNRC6CQ9HCJ0 1690 aaKnown RBP19.76■□□□□ 0.75
HLA-A-208ENST00000496081 AKAP11Q9UKA4 1901 aa19.76■□□□□ 0.75
HLA-A-208ENST00000496081 CCDC171Q6TFL3 1326 aa19.75■□□□□ 0.75
HLA-A-208ENST00000496081 SLC5A1P13866 664 aa19.75■□□□□ 0.75
HLA-A-208ENST00000496081 BAG6P46379 1132 aa19.75■□□□□ 0.75
HLA-A-208ENST00000496081 CCDC102BQ68D86 513 aa19.75■□□□□ 0.75
HLA-A-208ENST00000496081 CCDC125Q86Z20 511 aa19.75■□□□□ 0.75
HLA-A-208ENST00000496081 CNBD1Q8NA66 436 aa19.75■□□□□ 0.75
HLA-A-208ENST00000496081 MCAMP43121 646 aa19.75■□□□□ 0.75
HLA-A-208ENST00000496081 ZAP70P43403 619 aa19.75■□□□□ 0.75
HLA-A-208ENST00000496081 PHKA1P46020 1223 aa19.75■□□□□ 0.75
HLA-A-208ENST00000496081 ZNF589Q86UQ0 364 aaPredicted RBP19.75■□□□□ 0.75
HLA-A-208ENST00000496081 TFCP2L1Q9NZI6 479 aa19.75■□□□□ 0.75
HLA-A-208ENST00000496081 A0A1B0GUL6 1792 aa19.74■□□□□ 0.75
HLA-A-208ENST00000496081 PRR5LQ6MZQ0 368 aa19.74■□□□□ 0.75
HLA-A-208ENST00000496081 PI16Q6UXB8 463 aa19.74■□□□□ 0.75
HLA-A-208ENST00000496081 CAMKK2Q96RR4 588 aa19.74■□□□□ 0.75
HLA-A-208ENST00000496081 K7ELQ4 463 aaPredicted RBP19.73■□□□□ 0.75
HLA-A-208ENST00000496081 ARID4AP29374 1257 aaPredicted RBP19.73■□□□□ 0.75
HLA-A-208ENST00000496081 RPS8P62241 208 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms