RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 DPF2Q92785 391 aa12.97□□□□□ -0.33
SMARCAL1-213ENST00000496037 CDCA5Q96FF9 252 aa12.97□□□□□ -0.33
SMARCAL1-213ENST00000496037 POLR3GLQ9BT43 218 aa12.97□□□□□ -0.33
SMARCAL1-213ENST00000496037 RTFDC1Q9BY42 306 aaPredicted RBP12.97□□□□□ -0.33
SMARCAL1-213ENST00000496037 TRIM17Q9Y577 477 aa12.97□□□□□ -0.33
SMARCAL1-213ENST00000496037 CUL9Q8IWT3 2517 aa12.97□□□□□ -0.33
SMARCAL1-213ENST00000496037 FKBP1BP68106 108 aa12.96□□□□□ -0.33
SMARCAL1-213ENST00000496037 RBM26Q5T8P6 1007 aaKnown RBP12.96□□□□□ -0.33
SMARCAL1-213ENST00000496037 LHX8Q68G74 356 aa12.96□□□□□ -0.33
SMARCAL1-213ENST00000496037 GGA3Q9NZ52 723 aa12.96□□□□□ -0.33
SMARCAL1-213ENST00000496037 USP16Q9Y5T5 823 aa12.96□□□□□ -0.33
SMARCAL1-213ENST00000496037 RBBP6Q7Z6E9 1792 aaKnown RBP12.96□□□□□ -0.34
SMARCAL1-213ENST00000496037 PAPPA2Q9BXP8 1791 aa12.95□□□□□ -0.34
SMARCAL1-213ENST00000496037 PRAMEF22A3QJZ6 481 aa12.95□□□□□ -0.34
SMARCAL1-213ENST00000496037 RIOK3O14730 519 aaKnown RBP12.95□□□□□ -0.34
SMARCAL1-213ENST00000496037 EN2P19622 333 aaPredicted RBP12.95□□□□□ -0.34
SMARCAL1-213ENST00000496037 SREBF2Q12772 1141 aa12.95□□□□□ -0.34
SMARCAL1-213ENST00000496037 HLFQ16534 295 aa12.95□□□□□ -0.34
SMARCAL1-213ENST00000496037 TRIOBPQ9H2D6 2365 aa12.95□□□□□ -0.34
SMARCAL1-213ENST00000496037 RANBP2P49792 3224 aaKnown RBP12.95□□□□□ -0.34
SMARCAL1-213ENST00000496037 IBTKQ9P2D0 1353 aaPredicted RBP12.94□□□□□ -0.34
SMARCAL1-213ENST00000496037 BTBD11A6QL63 1104 aa12.94□□□□□ -0.34
SMARCAL1-213ENST00000496037 YDJCA8MPS7 323 aa12.94□□□□□ -0.34
SMARCAL1-213ENST00000496037 GNAT3A8MTJ3 354 aa12.94□□□□□ -0.34
SMARCAL1-213ENST00000496037 H0YGN5 161 aa12.94□□□□□ -0.34
SMARCAL1-213ENST00000496037 EGFRP00533 1210 aa12.94□□□□□ -0.34
SMARCAL1-213ENST00000496037 KIF4BQ2VIQ3 1234 aa12.94□□□□□ -0.34
SMARCAL1-213ENST00000496037 IER5LQ5T953 404 aa12.94□□□□□ -0.34
SMARCAL1-213ENST00000496037 MPNDQ8N594 471 aa12.94□□□□□ -0.34
SMARCAL1-213ENST00000496037 OTUD5Q96G74 571 aa12.94□□□□□ -0.34
SMARCAL1-213ENST00000496037 SNRPA1P09661 255 aaKnown RBP12.93□□□□□ -0.34
SMARCAL1-213ENST00000496037 RPS12P25398 132 aaKnown RBP12.93□□□□□ -0.34
SMARCAL1-213ENST00000496037 TM4SF4P48230 202 aa12.93□□□□□ -0.34
SMARCAL1-213ENST00000496037 IL17REQ8NFR9 667 aa12.93□□□□□ -0.34
SMARCAL1-213ENST00000496037 SIPA1L3O60292 1781 aaPredicted RBP12.93□□□□□ -0.34
SMARCAL1-213ENST00000496037 PSMD14O00487 310 aa12.92□□□□□ -0.34
SMARCAL1-213ENST00000496037 KCNQ3O43525 872 aa12.92□□□□□ -0.34
SMARCAL1-213ENST00000496037 OTOP1Q7RTM1 612 aa12.92□□□□□ -0.34
SMARCAL1-213ENST00000496037 GAS2L2Q8NHY3 880 aa12.92□□□□□ -0.34
SMARCAL1-213ENST00000496037 NLRP3Q96P20 1036 aa12.92□□□□□ -0.34
SMARCAL1-213ENST00000496037 CFHR5Q9BXR6 569 aa12.92□□□□□ -0.34
SMARCAL1-213ENST00000496037 ABCC4O15439 1325 aa12.91□□□□□ -0.34
SMARCAL1-213ENST00000496037 NBPF26B4DH59 902 aa12.91□□□□□ -0.34
SMARCAL1-213ENST00000496037 GPTP24298 496 aa12.91□□□□□ -0.34
SMARCAL1-213ENST00000496037 GOLGA2Q08379 1002 aa12.91□□□□□ -0.34
SMARCAL1-213ENST00000496037 MKRN3Q13064 507 aaKnown RBP12.91□□□□□ -0.34
SMARCAL1-213ENST00000496037 NBPF10Q6P3W6 841 aaKnown RBP12.91□□□□□ -0.34
SMARCAL1-213ENST00000496037 RNF25Q96BH1 459 aaPredicted RBP12.91□□□□□ -0.34
SMARCAL1-213ENST00000496037 PITPNM2Q9BZ72 1349 aa12.9□□□□□ -0.34
SMARCAL1-213ENST00000496037 SEC24BO95487 1268 aa12.9□□□□□ -0.34
SMARCAL1-213ENST00000496037 ALDH1A1P00352 501 aa12.9□□□□□ -0.34
SMARCAL1-213ENST00000496037 TTLL12Q14166 644 aaPredicted RBP12.9□□□□□ -0.34
SMARCAL1-213ENST00000496037 KIF6Q6ZMV9 814 aa12.9□□□□□ -0.34
SMARCAL1-213ENST00000496037 C3orf67Q6ZVT6 689 aa12.9□□□□□ -0.34
SMARCAL1-213ENST00000496037 SP8Q8IXZ3 490 aa12.9□□□□□ -0.34
SMARCAL1-213ENST00000496037 ARMC5Q96C12 935 aa12.9□□□□□ -0.34
SMARCAL1-213ENST00000496037 RBM27Q9P2N5 1060 aaKnown RBP12.9□□□□□ -0.34
SMARCAL1-213ENST00000496037 ERVV-1B6SEH8 477 aa12.89□□□□□ -0.35
SMARCAL1-213ENST00000496037 BBOX1O75936 387 aa12.89□□□□□ -0.35
SMARCAL1-213ENST00000496037 DBNDD1Q9H9R9 158 aa12.89□□□□□ -0.35
SMARCAL1-213ENST00000496037 PTPN22Q9Y2R2 807 aa12.89□□□□□ -0.35
SMARCAL1-213ENST00000496037 UBN2Q6ZU65 1347 aa12.88□□□□□ -0.35
SMARCAL1-213ENST00000496037 UBE2Q2LH0YL09 131 aa12.88□□□□□ -0.35
SMARCAL1-213ENST00000496037 TCIRG1Q13488 830 aa12.88□□□□□ -0.35
SMARCAL1-213ENST00000496037 ANGEL2Q5VTE6 544 aaKnown RBP12.88□□□□□ -0.35
SMARCAL1-213ENST00000496037 SUSD4Q5VX71 490 aa12.88□□□□□ -0.35
SMARCAL1-213ENST00000496037 MOB2Q70IA6 237 aa12.88□□□□□ -0.35
SMARCAL1-213ENST00000496037 NGEFQ8N5V2 710 aa12.88□□□□□ -0.35
SMARCAL1-213ENST00000496037 ERO1AQ96HE7 468 aa12.88□□□□□ -0.35
SMARCAL1-213ENST00000496037 R3HDMLQ9H3Y0 253 aa12.88□□□□□ -0.35
SMARCAL1-213ENST00000496037 PANK3Q9H999 370 aa12.88□□□□□ -0.35
SMARCAL1-213ENST00000496037 CEMIPQ8WUJ3 1361 aa12.88□□□□□ -0.35
SMARCAL1-213ENST00000496037 UNC80Q8N2C7 3258 aa12.88□□□□□ -0.35
SMARCAL1-213ENST00000496037 ASTN2O75129 1339 aaPredicted RBP12.88□□□□□ -0.35
SMARCAL1-213ENST00000496037 MAP3K15Q6ZN16 1313 aa12.88□□□□□ -0.35
SMARCAL1-213ENST00000496037 POLR2AP24928 1970 aaKnown RBP12.87□□□□□ -0.35
SMARCAL1-213ENST00000496037 KIAA0100Q14667 2235 aaKnown RBP12.87□□□□□ -0.35
SMARCAL1-213ENST00000496037 NTSR2O95665 410 aa12.87□□□□□ -0.35
SMARCAL1-213ENST00000496037 WASHC4Q2M389 1173 aa12.87□□□□□ -0.35
SMARCAL1-213ENST00000496037 SLC4A8Q2Y0W8 1093 aa12.87□□□□□ -0.35
SMARCAL1-213ENST00000496037 PPP1R42Q7Z4L9 355 aa12.87□□□□□ -0.35
SMARCAL1-213ENST00000496037 ZNF609O15014 1411 aa12.87□□□□□ -0.35
SMARCAL1-213ENST00000496037 DIAPH1O60610 1272 aaKnown RBP12.86□□□□□ -0.35
SMARCAL1-213ENST00000496037 CEP290O15078 2479 aa12.86□□□□□ -0.35
SMARCAL1-213ENST00000496037 DUOX1Q9NRD9 1551 aa12.86□□□□□ -0.35
SMARCAL1-213ENST00000496037 LAMA3Q16787 3333 aa12.85□□□□□ -0.35
SMARCAL1-213ENST00000496037 NF2P35240 595 aa12.85□□□□□ -0.35
SMARCAL1-213ENST00000496037 SCARF1Q14162 830 aa12.85□□□□□ -0.35
SMARCAL1-213ENST00000496037 DDX46Q7L014 1031 aaKnown RBP12.85□□□□□ -0.35
SMARCAL1-213ENST00000496037 EFCC1Q9HA90 598 aa12.85□□□□□ -0.35
SMARCAL1-213ENST00000496037 RTL9Q8NET4 1388 aa12.84□□□□□ -0.35
SMARCAL1-213ENST00000496037 ECE2O60344 883 aa12.84□□□□□ -0.35
SMARCAL1-213ENST00000496037 GRAPQ13588 217 aa12.84□□□□□ -0.35
SMARCAL1-213ENST00000496037 PARP10Q53GL7 1025 aa12.84□□□□□ -0.35
SMARCAL1-213ENST00000496037 TMC4Q7Z404 712 aa12.84□□□□□ -0.35
SMARCAL1-213ENST00000496037 NBPF11Q86T75 865 aa12.84□□□□□ -0.35
SMARCAL1-213ENST00000496037 GRAPLQ8TC17 118 aaPredicted RBP12.84□□□□□ -0.35
SMARCAL1-213ENST00000496037 ZNF333Q96JL9 665 aa12.84□□□□□ -0.35
SMARCAL1-213ENST00000496037 ZBTB3Q9H5J0 574 aa12.84□□□□□ -0.35
SMARCAL1-213ENST00000496037 NUP98P52948 1817 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms