RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 GRAPQ13588 217 aa17.41■□□□□ 0.38
TFE3-205ENST00000495940 PKN2Q16513 984 aaKnown RBP17.41■□□□□ 0.38
TFE3-205ENST00000495940 PARP10Q53GL7 1025 aa17.41■□□□□ 0.38
TFE3-205ENST00000495940 SLC10A5Q5PT55 438 aa17.41■□□□□ 0.38
TFE3-205ENST00000495940 GRAPLQ8TC17 118 aaPredicted RBP17.41■□□□□ 0.38
TFE3-205ENST00000495940 THUMPD2Q9BTF0 503 aaKnown RBP17.41■□□□□ 0.38
TFE3-205ENST00000495940 UTP14AQ9BVJ6 771 aaKnown RBP17.41■□□□□ 0.38
TFE3-205ENST00000495940 PSME4Q14997 1843 aa17.41■□□□□ 0.38
TFE3-205ENST00000495940 RIMBP2O15034 1052 aa17.4■□□□□ 0.38
TFE3-205ENST00000495940 SULF1Q8IWU6 871 aa17.4■□□□□ 0.38
TFE3-205ENST00000495940 ECE2O60344 883 aa17.39■□□□□ 0.37
TFE3-205ENST00000495940 EIF4A1P60842 406 aaKnown RBP17.39■□□□□ 0.37
TFE3-205ENST00000495940 FBXO46Q6PJ61 603 aaPredicted RBP17.39■□□□□ 0.37
TFE3-205ENST00000495940 MOB2Q70IA6 237 aa17.39■□□□□ 0.37
TFE3-205ENST00000495940 ZNF428Q96B54 188 aa17.39■□□□□ 0.37
TFE3-205ENST00000495940 U2AF1L5P0DN76 240 aaPredicted RBP17.38■□□□□ 0.37
TFE3-205ENST00000495940 FXR1P51114 621 aaKnown RBP eCLIP17.38■□□□□ 0.37
TFE3-205ENST00000495940 U2AF1Q01081 240 aaKnown RBP eCLIP17.38■□□□□ 0.37
TFE3-205ENST00000495940 WDR43Q15061 677 aaKnown RBP eCLIP17.38■□□□□ 0.37
TFE3-205ENST00000495940 DOK7Q18PE1 504 aa17.38■□□□□ 0.37
TFE3-205ENST00000495940 DDX46Q7L014 1031 aaKnown RBP17.38■□□□□ 0.37
TFE3-205ENST00000495940 RPS12P25398 132 aaKnown RBP17.37■□□□□ 0.37
TFE3-205ENST00000495940 WASHC4Q2M389 1173 aa17.37■□□□□ 0.37
TFE3-205ENST00000495940 LRP10Q7Z4F1 713 aa17.37■□□□□ 0.37
TFE3-205ENST00000495940 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.37■□□□□ 0.37
TFE3-205ENST00000495940 SCAF8Q9UPN6 1271 aaKnown RBP17.37■□□□□ 0.37
TFE3-205ENST00000495940 POTEFA5A3E0 1075 aa17.36■□□□□ 0.37
TFE3-205ENST00000495940 GPR25O00155 361 aa17.36■□□□□ 0.37
TFE3-205ENST00000495940 HTATSF1O43719 755 aaKnown RBP17.36■□□□□ 0.37
TFE3-205ENST00000495940 ANXA1P04083 346 aa17.36■□□□□ 0.37
TFE3-205ENST00000495940 PPP2R1AP30153 589 aa17.36■□□□□ 0.37
TFE3-205ENST00000495940 PROSER3Q2NL68 480 aa17.36■□□□□ 0.37
TFE3-205ENST00000495940 ANGEL2Q5VTE6 544 aaKnown RBP17.36■□□□□ 0.37
TFE3-205ENST00000495940 REM2Q8IYK8 340 aaPredicted RBP17.36■□□□□ 0.37
TFE3-205ENST00000495940 MKRN3Q13064 507 aaKnown RBP17.35■□□□□ 0.37
TFE3-205ENST00000495940 NLRP10Q86W26 655 aa17.35■□□□□ 0.37
TFE3-205ENST00000495940 CFAP53Q96M91 514 aa17.35■□□□□ 0.37
TFE3-205ENST00000495940 R3HDMLQ9H3Y0 253 aa17.35■□□□□ 0.37
TFE3-205ENST00000495940 POLLQ9UGP5 575 aa17.35■□□□□ 0.37
TFE3-205ENST00000495940 NSFL1CQ9UNZ2 370 aaKnown RBP17.35■□□□□ 0.37
TFE3-205ENST00000495940 C6orf229H3BNL8 230 aa17.34■□□□□ 0.37
TFE3-205ENST00000495940 ANP32AP39687 249 aaKnown RBP17.34■□□□□ 0.37
TFE3-205ENST00000495940 GPSM2P81274 684 aa17.34■□□□□ 0.37
TFE3-205ENST00000495940 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
TFE3-205ENST00000495940 CELF1Q92879 486 aaKnown RBP17.34■□□□□ 0.37
TFE3-205ENST00000495940 ZNF646O15015 1829 aaPredicted RBP17.33■□□□□ 0.37
TFE3-205ENST00000495940 ERBB4Q15303 1308 aa17.33■□□□□ 0.36
TFE3-205ENST00000495940 UBE2Q2LH0YL09 131 aa17.33■□□□□ 0.36
TFE3-205ENST00000495940 PDIA6Q15084 440 aa17.33■□□□□ 0.36
TFE3-205ENST00000495940 SZT2Q5T011 3432 aa17.32■□□□□ 0.36
TFE3-205ENST00000495940 SH3TC1Q8TE82 1336 aa17.32■□□□□ 0.36
TFE3-205ENST00000495940 SCARF1Q14162 830 aa17.32■□□□□ 0.36
TFE3-205ENST00000495940 TRMT112Q9UI30 125 aaKnown RBP17.32■□□□□ 0.36
TFE3-205ENST00000495940 FKBP1BP68106 108 aa17.31■□□□□ 0.36
TFE3-205ENST00000495940 PRAMEF18Q5VWM3 479 aa17.31■□□□□ 0.36
TFE3-205ENST00000495940 TMC4Q7Z404 712 aa17.31■□□□□ 0.36
TFE3-205ENST00000495940 ZNF609O15014 1411 aa17.3■□□□□ 0.36
TFE3-205ENST00000495940 FKTNO75072 461 aa17.3■□□□□ 0.36
TFE3-205ENST00000495940 VIL1P09327 827 aaKnown RBP17.3■□□□□ 0.36
TFE3-205ENST00000495940 NOM1Q5C9Z4 860 aaKnown RBP17.3■□□□□ 0.36
TFE3-205ENST00000495940 LAMB1P07942 1786 aa17.3■□□□□ 0.36
TFE3-205ENST00000495940 EIF2S2P20042 333 aaKnown RBP17.29■□□□□ 0.36
TFE3-205ENST00000495940 ZNF280AP59817 542 aaPredicted RBP17.29■□□□□ 0.36
TFE3-205ENST00000495940 ZNF521Q96K83 1311 aa17.28■□□□□ 0.36
TFE3-205ENST00000495940 TM4SF4P48230 202 aa17.28■□□□□ 0.36
TFE3-205ENST00000495940 GOLGA2Q08379 1002 aa17.28■□□□□ 0.36
TFE3-205ENST00000495940 AIMP1Q12904 312 aaKnown RBP17.28■□□□□ 0.36
TFE3-205ENST00000495940 TBC1D16Q8TBP0 767 aa17.28■□□□□ 0.36
TFE3-205ENST00000495940 EYA3Q99504 573 aa17.28■□□□□ 0.36
TFE3-205ENST00000495940 TRIM17Q9Y577 477 aa17.28■□□□□ 0.36
TFE3-205ENST00000495940 KIAA0100Q14667 2235 aaKnown RBP17.28■□□□□ 0.36
TFE3-205ENST00000495940 AAMPQ13685 434 aa17.27■□□□□ 0.36
TFE3-205ENST00000495940 TTLL12Q14166 644 aaPredicted RBP17.27■□□□□ 0.36
TFE3-205ENST00000495940 XAGE3Q8WTP9 111 aa17.27■□□□□ 0.36
TFE3-205ENST00000495940 NECTIN2Q92692 538 aa17.27■□□□□ 0.36
TFE3-205ENST00000495940 ADAMTS8Q9UP79 889 aa17.27■□□□□ 0.36
TFE3-205ENST00000495940 PITPNM2Q9BZ72 1349 aa17.26■□□□□ 0.35
TFE3-205ENST00000495940 HSP90AB3PQ58FF7 597 aa17.26■□□□□ 0.35
TFE3-205ENST00000495940 RSBN1LQ6PCB5 846 aaPredicted RBP17.26■□□□□ 0.35
TFE3-205ENST00000495940 COPS6Q7L5N1 327 aa17.26■□□□□ 0.35
TFE3-205ENST00000495940 OTOP1Q7RTM1 612 aa17.26■□□□□ 0.35
TFE3-205ENST00000495940 MYOZ2Q9NPC6 264 aa17.26■□□□□ 0.35
TFE3-205ENST00000495940 COLQQ9Y215 455 aaPredicted RBP17.26■□□□□ 0.35
TFE3-205ENST00000495940 EN2P19622 333 aaPredicted RBP17.25■□□□□ 0.35
TFE3-205ENST00000495940 SREBF2Q12772 1141 aa17.25■□□□□ 0.35
TFE3-205ENST00000495940 TCIRG1Q13488 830 aa17.25■□□□□ 0.35
TFE3-205ENST00000495940 IPO9Q96P70 1041 aaKnown RBP17.25■□□□□ 0.35
TFE3-205ENST00000495940 CFHR5Q9BXR6 569 aa17.25■□□□□ 0.35
TFE3-205ENST00000495940 NOP58Q9Y2X3 529 aaKnown RBP17.25■□□□□ 0.35
TFE3-205ENST00000495940 SPEF2Q9C093 1822 aa17.25■□□□□ 0.35
TFE3-205ENST00000495940 UFL1O94874 794 aa17.24■□□□□ 0.35
TFE3-205ENST00000495940 TRMT2AQ8IZ69 625 aaKnown RBP17.24■□□□□ 0.35
TFE3-205ENST00000495940 AGBL3Q8NEM8 1001 aa17.24■□□□□ 0.35
TFE3-205ENST00000495940 FAM89AQ96GI7 184 aa17.24■□□□□ 0.35
TFE3-205ENST00000495940 ZC3H12CQ9C0D7 883 aaKnown RBP17.24■□□□□ 0.35
TFE3-205ENST00000495940 PRKG1Q13976 671 aa17.23■□□□□ 0.35
TFE3-205ENST00000495940 NBPF9Q3BBW0 867 aa17.23■□□□□ 0.35
TFE3-205ENST00000495940 RTL5Q5HYW3 569 aaPredicted RBP17.23■□□□□ 0.35
TFE3-205ENST00000495940 EXOC6Q8TAG9 804 aa17.23■□□□□ 0.35
TFE3-205ENST00000495940 GMLQ99445 158 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms