RNA–Protein interactions for RNA: ENST00000495845.1

SPRR3-204, Transcript of small proline rich protein 3, human

TSL 3

Gene SPRR3, Length 500 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPRR3-204	ENST00000495845	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.63	□□□□□ -0.23
SPRR3-204	ENST00000495845	CDC37L1	Q7L3B6	337 aa		13.63	□□□□□ -0.23
SPRR3-204	ENST00000495845	DPF2	Q92785	391 aa		13.63	□□□□□ -0.23
SPRR3-204	ENST00000495845	CELF1	Q92879	486 aa	Known RBP	13.63	□□□□□ -0.23
SPRR3-204	ENST00000495845	ISCA1	Q9BUE6	129 aa		13.63	□□□□□ -0.23
SPRR3-204	ENST00000495845	POLL	Q9UGP5	575 aa		13.63	□□□□□ -0.23
SPRR3-204	ENST00000495845	TNRC18	O15417	2968 aa	Predicted RBP	13.63	□□□□□ -0.23
SPRR3-204	ENST00000495845	PSMD14	O00487	310 aa		13.62	□□□□□ -0.23
SPRR3-204	ENST00000495845	RIPK4	P57078	832 aa		13.62	□□□□□ -0.23
SPRR3-204	ENST00000495845	MLLT1	Q03111	559 aa	Predicted RBP	13.62	□□□□□ -0.23
SPRR3-204	ENST00000495845	TNIP1	Q15025	636 aa		13.62	□□□□□ -0.23
SPRR3-204	ENST00000495845	SAMD7	Q7Z3H4	446 aa		13.62	□□□□□ -0.23
SPRR3-204	ENST00000495845	USP48	Q86UV5	1035 aa		13.62	□□□□□ -0.23
SPRR3-204	ENST00000495845	MICALL2	Q8IY33	904 aa		13.62	□□□□□ -0.23
SPRR3-204	ENST00000495845	ZNF428	Q96B54	188 aa		13.62	□□□□□ -0.23
SPRR3-204	ENST00000495845	TRMT112	Q9UI30	125 aa	Known RBP	13.62	□□□□□ -0.23
SPRR3-204	ENST00000495845	SH3TC1	Q8TE82	1336 aa		13.62	□□□□□ -0.23
SPRR3-204	ENST00000495845	AIMP1	Q12904	312 aa	Known RBP	13.61	□□□□□ -0.23
SPRR3-204	ENST00000495845	NECTIN2	Q92692	538 aa		13.61	□□□□□ -0.23
SPRR3-204	ENST00000495845	BEGAIN	Q9BUH8	593 aa		13.61	□□□□□ -0.23
SPRR3-204	ENST00000495845	TRIM35	Q9UPQ4	493 aa		13.61	□□□□□ -0.23
SPRR3-204	ENST00000495845	GPSM2	P81274	684 aa		13.6	□□□□□ -0.23
SPRR3-204	ENST00000495845	NOG	Q13253	232 aa		13.6	□□□□□ -0.23
SPRR3-204	ENST00000495845	HSP90AB3P	Q58FF7	597 aa		13.6	□□□□□ -0.23
SPRR3-204	ENST00000495845	DDX46	Q7L014	1031 aa	Known RBP	13.6	□□□□□ -0.23
SPRR3-204	ENST00000495845	TRIM28	Q13263	835 aa	Known RBP	13.59	□□□□□ -0.23
SPRR3-204	ENST00000495845	TMC4	Q7Z404	712 aa		13.59	□□□□□ -0.23
SPRR3-204	ENST00000495845	FAM89A	Q96GI7	184 aa		13.59	□□□□□ -0.23
SPRR3-204	ENST00000495845	BCL2L13	Q9BXK5	485 aa		13.59	□□□□□ -0.23
SPRR3-204	ENST00000495845	ZNF408	Q9H9D4	720 aa		13.59	□□□□□ -0.23
SPRR3-204	ENST00000495845	DBNDD1	Q9H9R9	158 aa		13.59	□□□□□ -0.23
SPRR3-204	ENST00000495845	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.59	□□□□□ -0.23
SPRR3-204	ENST00000495845	CHPF2	Q9P2E5	772 aa		13.59	□□□□□ -0.23
SPRR3-204	ENST00000495845	ASTN2	O75129	1339 aa	Predicted RBP	13.59	□□□□□ -0.23
SPRR3-204	ENST00000495845	DLG5	Q8TDM6	1919 aa		13.58	□□□□□ -0.23
SPRR3-204	ENST00000495845	ADM5	C9JUS6	153 aa		13.58	□□□□□ -0.24
SPRR3-204	ENST00000495845	VIL1	P09327	827 aa	Known RBP	13.58	□□□□□ -0.24
SPRR3-204	ENST00000495845	HUNK	P57058	714 aa		13.58	□□□□□ -0.24
SPRR3-204	ENST00000495845	WASHC4	Q2M389	1173 aa		13.58	□□□□□ -0.24
SPRR3-204	ENST00000495845	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.58	□□□□□ -0.24
SPRR3-204	ENST00000495845	PLBD2	Q8NHP8	589 aa		13.58	□□□□□ -0.24
SPRR3-204	ENST00000495845	COLQ	Q9Y215	455 aa	Predicted RBP	13.58	□□□□□ -0.24
SPRR3-204	ENST00000495845	LRRC37A	A6NMS7	1700 aa		13.57	□□□□□ -0.24
SPRR3-204	ENST00000495845		H7C1D1	291 aa		13.57	□□□□□ -0.24
SPRR3-204	ENST00000495845	NEFM	P07197	916 aa		13.57	□□□□□ -0.24
SPRR3-204	ENST00000495845	RGMB	Q6NW40	437 aa		13.57	□□□□□ -0.24
SPRR3-204	ENST00000495845	KRT26	Q7Z3Y9	468 aa		13.57	□□□□□ -0.24
SPRR3-204	ENST00000495845	TBC1D16	Q8TBP0	767 aa		13.57	□□□□□ -0.24
SPRR3-204	ENST00000495845	GML	Q99445	158 aa		13.57	□□□□□ -0.24
SPRR3-204	ENST00000495845	TMX4	Q9H1E5	349 aa	Predicted RBP	13.57	□□□□□ -0.24
SPRR3-204	ENST00000495845	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.57	□□□□□ -0.24
SPRR3-204	ENST00000495845	MAPK8IP3	Q9UPT6	1336 aa		13.57	□□□□□ -0.24
SPRR3-204	ENST00000495845	ATP5J2-PTCD1	G3V325	749 aa		13.56	□□□□□ -0.24
SPRR3-204	ENST00000495845	KIF23	Q02241	960 aa	Predicted RBP	13.56	□□□□□ -0.24
SPRR3-204	ENST00000495845	DGKZ	Q13574	1117 aa		13.56	□□□□□ -0.24
SPRR3-204	ENST00000495845	DOK7	Q18PE1	504 aa		13.56	□□□□□ -0.24
SPRR3-204	ENST00000495845	ANKRD13D	Q6ZTN6	518 aa		13.56	□□□□□ -0.24
SPRR3-204	ENST00000495845	CSRNP1	Q96S65	589 aa		13.56	□□□□□ -0.24
SPRR3-204	ENST00000495845	PNN	Q9H307	717 aa	Known RBP	13.56	□□□□□ -0.24
SPRR3-204	ENST00000495845	GBA2	Q9HCG7	927 aa	Predicted RBP	13.56	□□□□□ -0.24
SPRR3-204	ENST00000495845	RNF186	Q9NXI6	227 aa		13.56	□□□□□ -0.24
SPRR3-204	ENST00000495845	PODXL2	Q9NZ53	605 aa		13.56	□□□□□ -0.24
SPRR3-204	ENST00000495845	WTIP	A6NIX2	430 aa	Predicted RBP	13.55	□□□□□ -0.24
SPRR3-204	ENST00000495845	RIMBP2	O15034	1052 aa		13.55	□□□□□ -0.24
SPRR3-204	ENST00000495845	ECE2	O60344	883 aa		13.55	□□□□□ -0.24
SPRR3-204	ENST00000495845	RPS12	P25398	132 aa	Known RBP	13.55	□□□□□ -0.24
SPRR3-204	ENST00000495845	ZNF280A	P59817	542 aa	Predicted RBP	13.55	□□□□□ -0.24
SPRR3-204	ENST00000495845	SEC31B	Q9NQW1	1179 aa		13.55	□□□□□ -0.24
SPRR3-204	ENST00000495845	SAGE1	Q9NXZ1	904 aa		13.55	□□□□□ -0.24
SPRR3-204	ENST00000495845	ZNF609	O15014	1411 aa		13.55	□□□□□ -0.24
SPRR3-204	ENST00000495845	TRPM7	Q96QT4	1865 aa		13.55	□□□□□ -0.24
SPRR3-204	ENST00000495845	LAMB2	P55268	1798 aa		13.54	□□□□□ -0.24
SPRR3-204	ENST00000495845	ANKRD36C	Q5JPF3	1778 aa		13.54	□□□□□ -0.24
SPRR3-204	ENST00000495845	SLC10A3	P09131	477 aa		13.54	□□□□□ -0.24
SPRR3-204	ENST00000495845	HOXB7	P09629	217 aa		13.54	□□□□□ -0.24
SPRR3-204	ENST00000495845	ZNF853	P0CG23	659 aa		13.54	□□□□□ -0.24
SPRR3-204	ENST00000495845	RPS8	P62241	208 aa	Known RBP	13.54	□□□□□ -0.24
SPRR3-204	ENST00000495845	RTL5	Q5HYW3	569 aa	Predicted RBP	13.53	□□□□□ -0.24
SPRR3-204	ENST00000495845	KIF12	Q96FN5	646 aa		13.53	□□□□□ -0.24
SPRR3-204	ENST00000495845	C6orf229	H3BNL8	230 aa		13.52	□□□□□ -0.25
SPRR3-204	ENST00000495845	IRS4	O14654	1257 aa	Predicted RBP	13.52	□□□□□ -0.25
SPRR3-204	ENST00000495845	KIF4B	Q2VIQ3	1234 aa		13.52	□□□□□ -0.25
SPRR3-204	ENST00000495845	RBM26	Q5T8P6	1007 aa	Known RBP	13.52	□□□□□ -0.25
SPRR3-204	ENST00000495845	HDGFL1	Q5TGJ6	251 aa		13.52	□□□□□ -0.25
SPRR3-204	ENST00000495845	CCDC146	Q8IYE0	955 aa		13.52	□□□□□ -0.25
SPRR3-204	ENST00000495845	CCDC102A	Q96A19	550 aa		13.52	□□□□□ -0.25
SPRR3-204	ENST00000495845	GGA3	Q9NZ52	723 aa		13.52	□□□□□ -0.25
SPRR3-204	ENST00000495845	DBF4	Q9UBU7	674 aa	Predicted RBP	13.52	□□□□□ -0.25
SPRR3-204	ENST00000495845	TAF1	P21675	1872 aa		13.51	□□□□□ -0.25
SPRR3-204	ENST00000495845	DDX60	Q8IY21	1712 aa	Known RBP	13.51	□□□□□ -0.25
SPRR3-204	ENST00000495845	TRPA1	O75762	1119 aa		13.51	□□□□□ -0.25
SPRR3-204	ENST00000495845	ZNF157	P51786	506 aa	Predicted RBP	13.51	□□□□□ -0.25
SPRR3-204	ENST00000495845	LMOD3	Q0VAK6	560 aa		13.51	□□□□□ -0.25
SPRR3-204	ENST00000495845	RASAL3	Q86YV0	1011 aa		13.51	□□□□□ -0.25
SPRR3-204	ENST00000495845	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.51	□□□□□ -0.25
SPRR3-204	ENST00000495845	CDCA5	Q96FF9	252 aa		13.51	□□□□□ -0.25
SPRR3-204	ENST00000495845	PHAX	Q9H814	394 aa	Known RBP	13.51	□□□□□ -0.25
SPRR3-204	ENST00000495845	HTT	P42858	3142 aa		13.5	□□□□□ -0.25
SPRR3-204	ENST00000495845	RALBP1	Q15311	655 aa		13.5	□□□□□ -0.25
SPRR3-204	ENST00000495845	NEUROD2	Q15784	382 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms