RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 A0A1B0GUL7 405 aa29.73■■■□□ 2.35
PPP1R3F-205ENST00000495799 ATP5JP18859 108 aa29.73■■■□□ 2.35
PPP1R3F-205ENST00000495799 SEC24BO95487 1268 aa29.72■■■□□ 2.35
PPP1R3F-205ENST00000495799 ILDR1Q86SU0 546 aaPredicted RBP29.72■■■□□ 2.35
PPP1R3F-205ENST00000495799 DBNDD2Q9BQY9 259 aa29.72■■■□□ 2.35
PPP1R3F-205ENST00000495799 PNPLA7Q6ZV29 1317 aa29.72■■■□□ 2.35
PPP1R3F-205ENST00000495799 MFAP1P55081 439 aaKnown RBP29.71■■■□□ 2.35
PPP1R3F-205ENST00000495799 SLC15A2Q16348 729 aa29.71■■■□□ 2.35
PPP1R3F-205ENST00000495799 ATP2B3Q16720 1220 aa29.71■■■□□ 2.35
PPP1R3F-205ENST00000495799 PRR5LQ6MZQ0 368 aa29.71■■■□□ 2.35
PPP1R3F-205ENST00000495799 EVI5LQ96CN4 794 aa29.71■■■□□ 2.35
PPP1R3F-205ENST00000495799 PDE8BO95263 885 aa29.7■■■□□ 2.34
PPP1R3F-205ENST00000495799 C3orf67Q6ZVT6 689 aa29.7■■■□□ 2.34
PPP1R3F-205ENST00000495799 POLRMTO00411 1230 aaKnown RBP29.69■■■□□ 2.34
PPP1R3F-205ENST00000495799 TIMM10P62072 90 aa29.69■■■□□ 2.34
PPP1R3F-205ENST00000495799 VGLL2Q8N8G2 317 aa29.69■■■□□ 2.34
PPP1R3F-205ENST00000495799 TNRC6CQ9HCJ0 1690 aaKnown RBP29.69■■■□□ 2.34
PPP1R3F-205ENST00000495799 PUM3Q15397 648 aaKnown RBP29.68■■■□□ 2.34
PPP1R3F-205ENST00000495799 CCDC158Q5M9N0 1113 aa29.68■■■□□ 2.34
PPP1R3F-205ENST00000495799 GORABQ5T7V8 394 aa29.68■■■□□ 2.34
PPP1R3F-205ENST00000495799 DDX46Q7L014 1031 aaKnown RBP29.68■■■□□ 2.34
PPP1R3F-205ENST00000495799 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.67■■■□□ 2.34
PPP1R3F-205ENST00000495799 BSDC1Q9NW68 430 aaPredicted RBP29.67■■■□□ 2.34
PPP1R3F-205ENST00000495799 DDR1Q08345 913 aa29.66■■■□□ 2.34
PPP1R3F-205ENST00000495799 BOLA2Q9H3K6 86 aa29.66■■■□□ 2.34
PPP1R3F-205ENST00000495799 ARAP2Q8WZ64 1704 aa29.66■■■□□ 2.34
PPP1R3F-205ENST00000495799 NRXN2Q9P2S2 1712 aa29.66■■■□□ 2.34
PPP1R3F-205ENST00000495799 MAP4K4O95819 1239 aaPredicted RBP29.66■■■□□ 2.34
PPP1R3F-205ENST00000495799 LPIN2Q92539 896 aa29.66■■■□□ 2.34
PPP1R3F-205ENST00000495799 XAGE2Q96GT9 111 aa29.66■■■□□ 2.34
PPP1R3F-205ENST00000495799 ANO8Q9HCE9 1232 aaPredicted RBP29.66■■■□□ 2.34
PPP1R3F-205ENST00000495799 HIP1O00291 1037 aa29.65■■■□□ 2.34
PPP1R3F-205ENST00000495799 REC8O95072 547 aa29.64■■■□□ 2.34
PPP1R3F-205ENST00000495799 SLC5A1P13866 664 aa29.64■■■□□ 2.34
PPP1R3F-205ENST00000495799 CHMLP26374 656 aa29.64■■■□□ 2.34
PPP1R3F-205ENST00000495799 CCDC24Q8N4L8 307 aa29.64■■■□□ 2.34
PPP1R3F-205ENST00000495799 TBC1D32Q96NH3 1257 aa29.64■■■□□ 2.34
PPP1R3F-205ENST00000495799 HAUS7Q99871 368 aa29.64■■■□□ 2.34
PPP1R3F-205ENST00000495799 RPS8P62241 208 aaKnown RBP29.63■■■□□ 2.33
PPP1R3F-205ENST00000495799 TTC39AQ5SRH9 613 aa29.63■■■□□ 2.33
PPP1R3F-205ENST00000495799 PARP3Q9Y6F1 533 aa29.63■■■□□ 2.33
PPP1R3F-205ENST00000495799 DEFB132Q7Z7B7 95 aa29.62■■■□□ 2.33
PPP1R3F-205ENST00000495799 RPGRQ92834 1020 aaKnown RBP29.62■■■□□ 2.33
PPP1R3F-205ENST00000495799 FGFR2P21802 821 aa29.61■■■□□ 2.33
PPP1R3F-205ENST00000495799 CHRNDQ07001 517 aa29.61■■■□□ 2.33
PPP1R3F-205ENST00000495799 TICAM2Q86XR7 235 aa29.61■■■□□ 2.33
PPP1R3F-205ENST00000495799 C22orf23Q9BZE7 217 aa29.61■■■□□ 2.33
PPP1R3F-205ENST00000495799 A0A1B0GUL6 1792 aa29.61■■■□□ 2.33
PPP1R3F-205ENST00000495799 RFX7Q2KHR2 1363 aa29.61■■■□□ 2.33
PPP1R3F-205ENST00000495799 IFIT1P09914 478 aaKnown RBP29.61■■■□□ 2.33
PPP1R3F-205ENST00000495799 RUFY2Q8WXA3 655 aa29.61■■■□□ 2.33
PPP1R3F-205ENST00000495799 CELF1Q92879 486 aaKnown RBP29.61■■■□□ 2.33
PPP1R3F-205ENST00000495799 GRAPQ13588 217 aa29.6■■■□□ 2.33
PPP1R3F-205ENST00000495799 GRAPLQ8TC17 118 aaPredicted RBP29.6■■■□□ 2.33
PPP1R3F-205ENST00000495799 ESYT1Q9BSJ8 1104 aa29.6■■■□□ 2.33
PPP1R3F-205ENST00000495799 DIAPH3Q9NSV4 1193 aa29.6■■■□□ 2.33
PPP1R3F-205ENST00000495799 CRY2Q49AN0 593 aa29.59■■■□□ 2.33
PPP1R3F-205ENST00000495799 RBM17Q96I25 401 aaKnown RBP29.59■■■□□ 2.33
PPP1R3F-205ENST00000495799 ZNF512BQ96KM6 892 aaPredicted RBP29.59■■■□□ 2.33
PPP1R3F-205ENST00000495799 ANKRD2Q9GZV1 360 aa29.59■■■□□ 2.33
PPP1R3F-205ENST00000495799 TAF1P21675 1872 aa29.58■■■□□ 2.33
PPP1R3F-205ENST00000495799 MMP10P09238 476 aa29.58■■■□□ 2.33
PPP1R3F-205ENST00000495799 ADORA1P30542 326 aa29.58■■■□□ 2.33
PPP1R3F-205ENST00000495799 HELBQ8NG08 1087 aaPredicted RBP29.58■■■□□ 2.33
PPP1R3F-205ENST00000495799 DNAJC2Q99543 621 aaKnown RBP29.58■■■□□ 2.33
PPP1R3F-205ENST00000495799 FSD1Q9BTV5 496 aa29.58■■■□□ 2.33
PPP1R3F-205ENST00000495799 UQCRFS1P1P0C7P4 283 aa29.57■■■□□ 2.32
PPP1R3F-205ENST00000495799 DDRGK1Q96HY6 314 aa29.57■■■□□ 2.32
PPP1R3F-205ENST00000495799 BRIP1Q9BX63 1249 aa29.57■■■□□ 2.32
PPP1R3F-205ENST00000495799 COL4A1P02462 1669 aa29.57■■■□□ 2.32
PPP1R3F-205ENST00000495799 MINPP1Q9UNW1 487 aa29.56■■■□□ 2.32
PPP1R3F-205ENST00000495799 UBE4AQ14139 1066 aa29.55■■■□□ 2.32
PPP1R3F-205ENST00000495799 KLRG2A4D1S0 409 aaPredicted RBP29.55■■■□□ 2.32
PPP1R3F-205ENST00000495799 EPB41L2O43491 1005 aaKnown RBP29.55■■■□□ 2.32
PPP1R3F-205ENST00000495799 TAF5LO75529 589 aa29.55■■■□□ 2.32
PPP1R3F-205ENST00000495799 RBM25P49756 843 aaKnown RBP29.55■■■□□ 2.32
PPP1R3F-205ENST00000495799 PAG1Q9NWQ8 432 aa29.55■■■□□ 2.32
PPP1R3F-205ENST00000495799 HOXA10P31260 410 aaPredicted RBP29.53■■■□□ 2.32
PPP1R3F-205ENST00000495799 LRRFIP1Q32MZ4 808 aaKnown RBP29.53■■■□□ 2.32
PPP1R3F-205ENST00000495799 RAD50Q92878 1312 aa29.53■■■□□ 2.32
PPP1R3F-205ENST00000495799 ANKRD31Q8N7Z5 1873 aa29.52■■■□□ 2.32
PPP1R3F-205ENST00000495799 PDE6BP35913 854 aa29.52■■■□□ 2.32
PPP1R3F-205ENST00000495799 MSL1Q68DK7 614 aa29.52■■■□□ 2.32
PPP1R3F-205ENST00000495799 CRAMP1Q96RY5 1269 aa29.52■■■□□ 2.32
PPP1R3F-205ENST00000495799 ARID4AP29374 1257 aaPredicted RBP29.51■■■□□ 2.32
PPP1R3F-205ENST00000495799 CCDC102BQ68D86 513 aa29.51■■■□□ 2.32
PPP1R3F-205ENST00000495799 TMC4Q7Z404 712 aa29.51■■■□□ 2.32
PPP1R3F-205ENST00000495799 KBTBD3Q8NAB2 608 aa29.51■■■□□ 2.32
PPP1R3F-205ENST00000495799 GOLIM4O00461 696 aa29.5■■■□□ 2.31
PPP1R3F-205ENST00000495799 KCNJ4P48050 445 aa29.5■■■□□ 2.31
PPP1R3F-205ENST00000495799 SLC16A10Q8TF71 515 aa29.5■■■□□ 2.31
PPP1R3F-205ENST00000495799 SGSM2O43147 1006 aa29.5■■■□□ 2.31
PPP1R3F-205ENST00000495799 USP26Q9BXU7 913 aa29.5■■■□□ 2.31
PPP1R3F-205ENST00000495799 BBOX1O75936 387 aa29.49■■■□□ 2.31
PPP1R3F-205ENST00000495799 CWC27Q6UX04 472 aaKnown RBP29.49■■■□□ 2.31
PPP1R3F-205ENST00000495799 MCCP23508 829 aa29.48■■■□□ 2.31
PPP1R3F-205ENST00000495799 FKBP4Q02790 459 aaKnown RBP eCLIP29.48■■■□□ 2.31
PPP1R3F-205ENST00000495799 TTF1Q15361 905 aaPredicted RBP29.48■■■□□ 2.31
PPP1R3F-205ENST00000495799 KIAA1211Q6ZU35 1233 aa29.48■■■□□ 2.31
PPP1R3F-205ENST00000495799 PHKA1P46020 1223 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms