RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 BEND3Q5T5X7 828 aa9.21□□□□□ -0.94
VPS52-221ENST00000495755 ANKRD18AQ8IVF6 992 aa9.21□□□□□ -0.94
VPS52-221ENST00000495755 GPR101Q96P66 508 aaPredicted RBP9.21□□□□□ -0.94
VPS52-221ENST00000495755 CDC5LQ99459 802 aaKnown RBP9.21□□□□□ -0.94
VPS52-221ENST00000495755 ZC3H12CQ9C0D7 883 aaKnown RBP9.21□□□□□ -0.94
VPS52-221ENST00000495755 DBNDD1Q9H9R9 158 aa9.21□□□□□ -0.94
VPS52-221ENST00000495755 KCNQ5Q9NR82 932 aa9.21□□□□□ -0.94
VPS52-221ENST00000495755 ANKIB1Q9P2G1 1089 aa9.21□□□□□ -0.94
VPS52-221ENST00000495755 PGAP2Q9UHJ9 254 aa9.21□□□□□ -0.94
VPS52-221ENST00000495755 PSMD14O00487 310 aa9.2□□□□□ -0.94
VPS52-221ENST00000495755 ECE2O60344 883 aa9.2□□□□□ -0.94
VPS52-221ENST00000495755 UFL1O94874 794 aa9.2□□□□□ -0.94
VPS52-221ENST00000495755 HIRAP54198 1017 aaPredicted RBP9.2□□□□□ -0.94
VPS52-221ENST00000495755 DPF2Q92785 391 aa9.2□□□□□ -0.94
VPS52-221ENST00000495755 BCL2L13Q9BXK5 485 aa9.2□□□□□ -0.94
VPS52-221ENST00000495755 BSDC1Q9NW68 430 aaPredicted RBP9.2□□□□□ -0.94
VPS52-221ENST00000495755 CNOT7Q9UIV1 285 aaKnown RBP9.2□□□□□ -0.94
VPS52-221ENST00000495755 GGA1Q9UJY5 639 aa9.2□□□□□ -0.94
VPS52-221ENST00000495755 MINPP1Q9UNW1 487 aa9.2□□□□□ -0.94
VPS52-221ENST00000495755 ZBTB12Q9Y330 459 aaPredicted RBP9.2□□□□□ -0.94
VPS52-221ENST00000495755 CACNA1FO60840 1977 aa9.2□□□□□ -0.94
VPS52-221ENST00000495755 XDHP47989 1333 aa9.2□□□□□ -0.94
VPS52-221ENST00000495755 SHTN1A0MZ66 631 aa9.19□□□□□ -0.94
VPS52-221ENST00000495755 WTIPA6NIX2 430 aaPredicted RBP9.19□□□□□ -0.94
VPS52-221ENST00000495755 F6X3S4 739 aa9.19□□□□□ -0.94
VPS52-221ENST00000495755 VIL1P09327 827 aaKnown RBP9.19□□□□□ -0.94
VPS52-221ENST00000495755 ATP2B4P23634 1241 aa9.19□□□□□ -0.94
VPS52-221ENST00000495755 ZC3H15Q8WU90 426 aaKnown RBP9.19□□□□□ -0.94
VPS52-221ENST00000495755 MKRN1Q9UHC7 482 aaKnown RBP9.19□□□□□ -0.94
VPS52-221ENST00000495755 CNTNAP1P78357 1384 aa9.19□□□□□ -0.94
VPS52-221ENST00000495755 E9PSI1 815 aa9.18□□□□□ -0.94
VPS52-221ENST00000495755 H7C1D1 291 aa9.18□□□□□ -0.94
VPS52-221ENST00000495755 TRAF5O00463 557 aa9.18□□□□□ -0.94
VPS52-221ENST00000495755 ITGA6P23229 1130 aa9.18□□□□□ -0.94
VPS52-221ENST00000495755 RPS12P25398 132 aaKnown RBP9.18□□□□□ -0.94
VPS52-221ENST00000495755 FOXO4P98177 505 aa9.18□□□□□ -0.94
VPS52-221ENST00000495755 FMR1Q06787 632 aaKnown RBP eCLIP9.18□□□□□ -0.94
VPS52-221ENST00000495755 SLFN5Q08AF3 891 aa9.18□□□□□ -0.94
VPS52-221ENST00000495755 MICALL2Q8IY33 904 aa9.18□□□□□ -0.94
VPS52-221ENST00000495755 TRPM4Q8TD43 1214 aa9.18□□□□□ -0.94
VPS52-221ENST00000495755 RASSF10A6NK89 507 aa9.17□□□□□ -0.94
VPS52-221ENST00000495755 CCER2I3L3R5 266 aa9.17□□□□□ -0.94
VPS52-221ENST00000495755 ALDH1L1O75891 902 aa9.17□□□□□ -0.94
VPS52-221ENST00000495755 IGHMBP2P38935 993 aaKnown RBP9.17□□□□□ -0.94
VPS52-221ENST00000495755 VEGFBP49765 207 aa9.17□□□□□ -0.94
VPS52-221ENST00000495755 FAM161AQ3B820 660 aa9.17□□□□□ -0.94
VPS52-221ENST00000495755 CST9Q5W186 159 aa9.17□□□□□ -0.94
VPS52-221ENST00000495755 MRPL50Q8N5N7 158 aaKnown RBP9.17□□□□□ -0.94
VPS52-221ENST00000495755 MED23Q9ULK4 1368 aa9.16□□□□□ -0.94
VPS52-221ENST00000495755 MYH3P11055 1940 aa9.16□□□□□ -0.94
VPS52-221ENST00000495755 G3V3G9 751 aa9.16□□□□□ -0.94
VPS52-221ENST00000495755 GRM8O00222 908 aa9.16□□□□□ -0.94
VPS52-221ENST00000495755 EGFRP00533 1210 aa9.16□□□□□ -0.94
VPS52-221ENST00000495755 CCT4P50991 539 aaKnown RBP9.16□□□□□ -0.94
VPS52-221ENST00000495755 ZNF280AP59817 542 aaPredicted RBP9.16□□□□□ -0.94
VPS52-221ENST00000495755 DEFB115Q30KQ5 88 aa9.16□□□□□ -0.94
VPS52-221ENST00000495755 EPHA10Q5JZY3 1008 aa9.16□□□□□ -0.94
VPS52-221ENST00000495755 DCAF8Q5TAQ9 597 aa9.16□□□□□ -0.94
VPS52-221ENST00000495755 SAMD7Q7Z3H4 446 aa9.16□□□□□ -0.94
VPS52-221ENST00000495755 PODNQ7Z5L7 613 aa9.16□□□□□ -0.94
VPS52-221ENST00000495755 TRMT2AQ8IZ69 625 aaKnown RBP9.16□□□□□ -0.94
VPS52-221ENST00000495755 CDCA7LQ96GN5 454 aa9.16□□□□□ -0.94
VPS52-221ENST00000495755 GMLQ99445 158 aa9.16□□□□□ -0.94
VPS52-221ENST00000495755 GLIS2Q9BZE0 524 aaPredicted RBP9.16□□□□□ -0.94
VPS52-221ENST00000495755 ANKRD2Q9GZV1 360 aa9.16□□□□□ -0.94
VPS52-221ENST00000495755 LEMD3Q9Y2U8 911 aa9.16□□□□□ -0.94
VPS52-221ENST00000495755 SCN9AQ15858 1988 aa9.15□□□□□ -0.94
VPS52-221ENST00000495755 ZNF609O15014 1411 aa9.15□□□□□ -0.94
VPS52-221ENST00000495755 ZNF804BA4D1E1 1349 aa9.15□□□□□ -0.94
VPS52-221ENST00000495755 ANKRD18BA2A2Z9 1011 aa9.15□□□□□ -0.94
VPS52-221ENST00000495755 HSPA1AP0DMV8 641 aaKnown RBP9.15□□□□□ -0.94
VPS52-221ENST00000495755 HSPA1BP0DMV9 641 aaKnown RBP9.15□□□□□ -0.94
VPS52-221ENST00000495755 IFIT5Q13325 482 aaKnown RBP9.15□□□□□ -0.94
VPS52-221ENST00000495755 TBC1D10BQ4KMP7 808 aaPredicted RBP9.15□□□□□ -0.94
VPS52-221ENST00000495755 IFFO2Q5TF58 517 aa9.15□□□□□ -0.94
VPS52-221ENST00000495755 RSBN1LQ6PCB5 846 aaPredicted RBP9.15□□□□□ -0.94
VPS52-221ENST00000495755 SLC4A10Q6U841 1118 aa9.15□□□□□ -0.94
VPS52-221ENST00000495755 LMBR1LQ6UX01 489 aa9.15□□□□□ -0.94
VPS52-221ENST00000495755 CDC37L1Q7L3B6 337 aa9.15□□□□□ -0.94
VPS52-221ENST00000495755 TXNRD3Q86VQ6 643 aa9.15□□□□□ -0.94
VPS52-221ENST00000495755 AGBL3Q8NEM8 1001 aa9.15□□□□□ -0.94
VPS52-221ENST00000495755 SSH1Q8WYL5 1049 aa9.15□□□□□ -0.94
VPS52-221ENST00000495755 MPHOSPH8Q99549 860 aa9.15□□□□□ -0.94
VPS52-221ENST00000495755 SRCIN1Q9C0H9 1055 aa9.15□□□□□ -0.94
VPS52-221ENST00000495755 UTYO14607 1347 aa9.14□□□□□ -0.95
VPS52-221ENST00000495755 USP17L3A6NCW0 530 aa9.14□□□□□ -0.95
VPS52-221ENST00000495755 USP17L4A6NCW7 530 aa9.14□□□□□ -0.95
VPS52-221ENST00000495755 KLRK1P26718 216 aa9.14□□□□□ -0.95
VPS52-221ENST00000495755 CHRNDQ07001 517 aa9.14□□□□□ -0.95
VPS52-221ENST00000495755 DACT2Q5SW24 774 aa9.14□□□□□ -0.95
VPS52-221ENST00000495755 RBM26Q5T8P6 1007 aaKnown RBP9.14□□□□□ -0.95
VPS52-221ENST00000495755 COL13A1Q5TAT6 717 aaPredicted RBP9.14□□□□□ -0.95
VPS52-221ENST00000495755 USP17L1Q7RTZ2 530 aa9.14□□□□□ -0.95
VPS52-221ENST00000495755 USP48Q86UV5 1035 aa9.14□□□□□ -0.95
VPS52-221ENST00000495755 KAZALD1Q96I82 304 aa9.14□□□□□ -0.95
VPS52-221ENST00000495755 COA1Q9GZY4 146 aa9.14□□□□□ -0.95
VPS52-221ENST00000495755 C9orf78Q9NZ63 289 aaPredicted RBP9.14□□□□□ -0.95
VPS52-221ENST00000495755 ABT1Q9ULW3 272 aaKnown RBP9.14□□□□□ -0.95
VPS52-221ENST00000495755 TLL2Q9Y6L7 1015 aa9.14□□□□□ -0.95
VPS52-221ENST00000495755 PTPRCP08575 1304 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms