RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 VPS53Q5VIR6 699 aa10.82□□□□□ -0.68
TM9SF4-207ENST00000495749 FAM173BQ6P4H8 233 aa10.82□□□□□ -0.68
TM9SF4-207ENST00000495749 TMEM87AQ8NBN3 555 aa10.82□□□□□ -0.68
TM9SF4-207ENST00000495749 VPS37CA5D8V6 355 aaPredicted RBP10.81□□□□□ -0.68
TM9SF4-207ENST00000495749 KIF6Q6ZMV9 814 aa10.81□□□□□ -0.68
TM9SF4-207ENST00000495749 C17orf53Q8N3J3 647 aaPredicted RBP10.81□□□□□ -0.68
TM9SF4-207ENST00000495749 CACNA1FO60840 1977 aa10.81□□□□□ -0.68
TM9SF4-207ENST00000495749 CCDC171Q6TFL3 1326 aa10.81□□□□□ -0.68
TM9SF4-207ENST00000495749 KCNQ2O43526 872 aa10.81□□□□□ -0.68
TM9SF4-207ENST00000495749 STARD3NLO95772 234 aa10.81□□□□□ -0.68
TM9SF4-207ENST00000495749 FGD1P98174 961 aa10.81□□□□□ -0.68
TM9SF4-207ENST00000495749 GIMAP6Q6P9H5 292 aa10.81□□□□□ -0.68
TM9SF4-207ENST00000495749 ATG9AQ7Z3C6 839 aa10.81□□□□□ -0.68
TM9SF4-207ENST00000495749 A0A1B0GUL7 405 aa10.8□□□□□ -0.68
TM9SF4-207ENST00000495749 DYNC1I1O14576 645 aa10.8□□□□□ -0.68
TM9SF4-207ENST00000495749 GJB2P29033 226 aa10.8□□□□□ -0.68
TM9SF4-207ENST00000495749 DNM1Q05193 864 aaKnown RBP10.8□□□□□ -0.68
TM9SF4-207ENST00000495749 UVSSAQ2YD98 709 aa10.8□□□□□ -0.68
TM9SF4-207ENST00000495749 TRMT112Q9UI30 125 aaKnown RBP10.8□□□□□ -0.68
TM9SF4-207ENST00000495749 CYP46A1Q9Y6A2 500 aa10.8□□□□□ -0.68
TM9SF4-207ENST00000495749 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.8□□□□□ -0.68
TM9SF4-207ENST00000495749 SLC27A2O14975 620 aa10.8□□□□□ -0.68
TM9SF4-207ENST00000495749 KDM4AO75164 1064 aa10.8□□□□□ -0.68
TM9SF4-207ENST00000495749 TCIRG1Q13488 830 aa10.8□□□□□ -0.68
TM9SF4-207ENST00000495749 RAB11FIP4Q86YS3 637 aa10.8□□□□□ -0.68
TM9SF4-207ENST00000495749 DHX37Q8IY37 1157 aaKnown RBP10.8□□□□□ -0.68
TM9SF4-207ENST00000495749 CCDC24Q8N4L8 307 aa10.8□□□□□ -0.68
TM9SF4-207ENST00000495749 ATP6V1DQ9Y5K8 247 aa10.8□□□□□ -0.68
TM9SF4-207ENST00000495749 LMO7Q8WWI1 1683 aa10.8□□□□□ -0.68
TM9SF4-207ENST00000495749 HAND2P61296 217 aa10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 BICDL1Q6ZP65 573 aa10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 STK11IPQ8N1F8 1099 aa10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 CEP126Q9P2H0 1117 aa10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 KDM3BQ7LBC6 1761 aa10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 ALS2Q96Q42 1657 aa10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 IFIT1P09914 478 aaKnown RBP10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 ME3Q16798 604 aa10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 WASHC4Q2M389 1173 aa10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 MAP7D2Q96T17 732 aa10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 GREM2Q9H772 168 aa10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 LETM1O95202 739 aaPredicted RBP10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 SCARF1Q14162 830 aa10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 NOLC1Q14978 699 aaKnown RBP eCLIP10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 NECTIN1Q15223 517 aa10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 TTLL5Q6EMB2 1281 aa10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 TSC1Q92574 1164 aa10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 DDX11Q96FC9 970 aa10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 TPCN1Q9ULQ1 816 aa10.79□□□□□ -0.68
TM9SF4-207ENST00000495749 EYA2O00167 538 aa10.78□□□□□ -0.68
TM9SF4-207ENST00000495749 HSP90B1P14625 803 aaKnown RBP10.78□□□□□ -0.68
TM9SF4-207ENST00000495749 RABL6Q3YEC7 729 aaPredicted RBP10.78□□□□□ -0.68
TM9SF4-207ENST00000495749 LDHAL6AQ6ZMR3 332 aa10.78□□□□□ -0.68
TM9SF4-207ENST00000495749 PTF1AQ7RTS3 328 aa10.78□□□□□ -0.68
TM9SF4-207ENST00000495749 CCDC191Q8NCU4 936 aa10.78□□□□□ -0.68
TM9SF4-207ENST00000495749 PIBF1Q8WXW3 757 aa10.78□□□□□ -0.68
TM9SF4-207ENST00000495749 CNNM1Q9NRU3 951 aa10.78□□□□□ -0.68
TM9SF4-207ENST00000495749 MTMR6Q9Y217 621 aa10.78□□□□□ -0.68
TM9SF4-207ENST00000495749 ATP6V1AP38606 617 aa10.78□□□□□ -0.68
TM9SF4-207ENST00000495749 IFIT5Q13325 482 aaKnown RBP10.78□□□□□ -0.68
TM9SF4-207ENST00000495749 NKX1-1Q15270 411 aaPredicted RBP10.78□□□□□ -0.68
TM9SF4-207ENST00000495749 DDB1Q16531 1140 aa10.78□□□□□ -0.68
TM9SF4-207ENST00000495749 IQSEC3Q9UPP2 1182 aaPredicted RBP10.78□□□□□ -0.68
TM9SF4-207ENST00000495749 KIF1AQ12756 1690 aa10.77□□□□□ -0.68
TM9SF4-207ENST00000495749 TAF5LO75529 589 aa10.77□□□□□ -0.68
TM9SF4-207ENST00000495749 ATP5JP18859 108 aa10.77□□□□□ -0.68
TM9SF4-207ENST00000495749 FAM98CQ17RN3 349 aaKnown RBP10.77□□□□□ -0.68
TM9SF4-207ENST00000495749 METTL24Q5JXM2 366 aa10.77□□□□□ -0.68
TM9SF4-207ENST00000495749 BLOC1S2Q6QNY1 142 aa10.77□□□□□ -0.68
TM9SF4-207ENST00000495749 DZIP3Q86Y13 1208 aaKnown RBP10.77□□□□□ -0.68
TM9SF4-207ENST00000495749 MAP4K1Q92918 833 aa10.77□□□□□ -0.68
TM9SF4-207ENST00000495749 PAG1Q9NWQ8 432 aa10.77□□□□□ -0.68
TM9SF4-207ENST00000495749 C8orf37Q96NL8 207 aa10.77□□□□□ -0.69
TM9SF4-207ENST00000495749 USP54Q70EL1 1684 aa10.77□□□□□ -0.69
TM9SF4-207ENST00000495749 ITGA6P23229 1130 aa10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 USP42Q9H9J4 1324 aaKnown RBP10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 COL15A1P39059 1388 aa10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 IRS4O14654 1257 aaPredicted RBP10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 TTC39AQ5SRH9 613 aa10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 MYRIPQ8NFW9 859 aa10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 XAGE2Q96GT9 111 aa10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 ROBO1Q9Y6N7 1651 aa10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 AP5Z1O43299 807 aa10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 CYP19A1P11511 503 aaPredicted RBP10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 IL15P40933 162 aaPredicted RBP10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 CCT2P78371 535 aaKnown RBP10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 ST3GAL1Q11201 340 aa10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 SPC24Q8NBT2 197 aa10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 FUCA2Q9BTY2 467 aa10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 ZSWIM6Q9HCJ5 1215 aa10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 GPHNQ9NQX3 736 aaPredicted RBP10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 TFIP11Q9UBB9 837 aaKnown RBP10.76□□□□□ -0.69
TM9SF4-207ENST00000495749 C5P01031 1676 aa10.75□□□□□ -0.69
TM9SF4-207ENST00000495749 WTIPA6NIX2 430 aaPredicted RBP10.75□□□□□ -0.69
TM9SF4-207ENST00000495749 CYP21A2P08686 494 aa10.75□□□□□ -0.69
TM9SF4-207ENST00000495749 ZAP70P43403 619 aa10.75□□□□□ -0.69
TM9SF4-207ENST00000495749 CEBPZQ03701 1054 aaKnown RBP10.75□□□□□ -0.69
TM9SF4-207ENST00000495749 NLRP10Q86W26 655 aa10.75□□□□□ -0.69
TM9SF4-207ENST00000495749 ZSCAN31Q96LW9 406 aaPredicted RBP10.75□□□□□ -0.69
TM9SF4-207ENST00000495749 SEC31BQ9NQW1 1179 aa10.75□□□□□ -0.69
TM9SF4-207ENST00000495749 SH2B1Q9NRF2 756 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms