RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 IGHDP01880 384 aa18.15■□□□□ 0.5
PTPRE-211ENST00000495530 DCTPP1Q9H773 170 aa18.15■□□□□ 0.5
PTPRE-211ENST00000495530 PDZRN3Q9UPQ7 1066 aa18.15■□□□□ 0.5
PTPRE-211ENST00000495530 RIC1Q4ADV7 1423 aa18.15■□□□□ 0.5
PTPRE-211ENST00000495530 PDE6BP35913 854 aa18.14■□□□□ 0.49
PTPRE-211ENST00000495530 LBX1P52954 281 aa18.14■□□□□ 0.49
PTPRE-211ENST00000495530 SURF6O75683 361 aaKnown RBP18.13■□□□□ 0.49
PTPRE-211ENST00000495530 ITGA6P23229 1130 aa18.13■□□□□ 0.49
PTPRE-211ENST00000495530 TAF7LQ5H9L4 462 aa18.13■□□□□ 0.49
PTPRE-211ENST00000495530 COPRSQ9NQ92 184 aa18.13■□□□□ 0.49
PTPRE-211ENST00000495530 ZBTB47Q9UFB7 747 aaPredicted RBP18.13■□□□□ 0.49
PTPRE-211ENST00000495530 FBXO3Q9UK99 471 aa18.13■□□□□ 0.49
PTPRE-211ENST00000495530 RTL9Q8NET4 1388 aa18.13■□□□□ 0.49
PTPRE-211ENST00000495530 KLRG2A4D1S0 409 aaPredicted RBP18.12■□□□□ 0.49
PTPRE-211ENST00000495530 RAB11FIP3O75154 756 aa18.12■□□□□ 0.49
PTPRE-211ENST00000495530 G3BP1Q13283 466 aaKnown RBP eCLIP18.12■□□□□ 0.49
PTPRE-211ENST00000495530 CCDC24Q8N4L8 307 aa18.12■□□□□ 0.49
PTPRE-211ENST00000495530 CDC5LQ99459 802 aaKnown RBP18.12■□□□□ 0.49
PTPRE-211ENST00000495530 GREM2Q9H772 168 aa18.12■□□□□ 0.49
PTPRE-211ENST00000495530 RNF216Q9NWF9 866 aaPredicted RBP18.12■□□□□ 0.49
PTPRE-211ENST00000495530 NOP58Q9Y2X3 529 aaKnown RBP18.12■□□□□ 0.49
PTPRE-211ENST00000495530 ABCC12Q96J65 1359 aa18.12■□□□□ 0.49
PTPRE-211ENST00000495530 CCDC85CA6NKD9 419 aa18.11■□□□□ 0.49
PTPRE-211ENST00000495530 LMNB1P20700 586 aa18.11■□□□□ 0.49
PTPRE-211ENST00000495530 RFX5P48382 616 aaPredicted RBP18.11■□□□□ 0.49
PTPRE-211ENST00000495530 PTPN12Q05209 780 aaKnown RBP18.11■□□□□ 0.49
PTPRE-211ENST00000495530 DDX46Q7L014 1031 aaKnown RBP18.11■□□□□ 0.49
PTPRE-211ENST00000495530 SMC5Q8IY18 1101 aa18.11■□□□□ 0.49
PTPRE-211ENST00000495530 RPGRQ92834 1020 aaKnown RBP18.11■□□□□ 0.49
PTPRE-211ENST00000495530 CCDC85AQ96PX6 553 aaPredicted RBP18.11■□□□□ 0.49
PTPRE-211ENST00000495530 WBP1LQ9NX94 342 aa18.11■□□□□ 0.49
PTPRE-211ENST00000495530 TNRC18O15417 2968 aaPredicted RBP18.11■□□□□ 0.49
PTPRE-211ENST00000495530 OS9Q13438 667 aaPredicted RBP18.1■□□□□ 0.49
PTPRE-211ENST00000495530 CRY2Q49AN0 593 aa18.1■□□□□ 0.49
PTPRE-211ENST00000495530 ERC1Q8IUD2 1116 aa18.1■□□□□ 0.49
PTPRE-211ENST00000495530 RBM17Q96I25 401 aaKnown RBP18.1■□□□□ 0.49
PTPRE-211ENST00000495530 IGHMBP2P38935 993 aaKnown RBP18.09■□□□□ 0.49
PTPRE-211ENST00000495530 MPHOSPH8Q99549 860 aa18.09■□□□□ 0.49
PTPRE-211ENST00000495530 DICER1Q9UPY3 1922 aaKnown RBP18.08■□□□□ 0.49
PTPRE-211ENST00000495530 H0YIN7 160 aa18.08■□□□□ 0.48
PTPRE-211ENST00000495530 CIAO1O76071 339 aa18.08■□□□□ 0.48
PTPRE-211ENST00000495530 HOXA10P31260 410 aaPredicted RBP18.08■□□□□ 0.48
PTPRE-211ENST00000495530 CHADLQ6NUI6 762 aa18.08■□□□□ 0.48
PTPRE-211ENST00000495530 LDHAL6AQ6ZMR3 332 aa18.08■□□□□ 0.48
PTPRE-211ENST00000495530 C3orf67Q6ZVT6 689 aa18.08■□□□□ 0.48
PTPRE-211ENST00000495530 ANKRD18AQ8IVF6 992 aa18.08■□□□□ 0.48
PTPRE-211ENST00000495530 NRXN2Q9P2S2 1712 aa18.08■□□□□ 0.48
PTPRE-211ENST00000495530 MYH3P11055 1940 aa18.08■□□□□ 0.48
PTPRE-211ENST00000495530 EYA2O00167 538 aa18.07■□□□□ 0.48
PTPRE-211ENST00000495530 NPR1P16066 1061 aa18.07■□□□□ 0.48
PTPRE-211ENST00000495530 ALDH1B1P30837 517 aa18.07■□□□□ 0.48
PTPRE-211ENST00000495530 IL15P40933 162 aaPredicted RBP18.07■□□□□ 0.48
PTPRE-211ENST00000495530 RPS8P62241 208 aaKnown RBP18.07■□□□□ 0.48
PTPRE-211ENST00000495530 RASSF7Q02833 373 aa18.07■□□□□ 0.48
PTPRE-211ENST00000495530 KIF1BPQ96EK5 621 aa18.07■□□□□ 0.48
PTPRE-211ENST00000495530 CRAMP1Q96RY5 1269 aa18.07■□□□□ 0.48
PTPRE-211ENST00000495530 PA2G4Q9UQ80 394 aaKnown RBP18.07■□□□□ 0.48
PTPRE-211ENST00000495530 EXOC6BQ9Y2D4 811 aa18.07■□□□□ 0.48
PTPRE-211ENST00000495530 LAMB2P55268 1798 aa18.07■□□□□ 0.48
PTPRE-211ENST00000495530 DDX60Q8IY21 1712 aaKnown RBP18.06■□□□□ 0.48
PTPRE-211ENST00000495530 POTECB2RU33 542 aa18.06■□□□□ 0.48
PTPRE-211ENST00000495530 BBOX1O75936 387 aa18.06■□□□□ 0.48
PTPRE-211ENST00000495530 HSPA8P11142 646 aaKnown RBP18.06■□□□□ 0.48
PTPRE-211ENST00000495530 ANKRD45Q5TZF3 282 aa18.06■□□□□ 0.48
PTPRE-211ENST00000495530 DPY19L2Q6NUT2 758 aa18.06■□□□□ 0.48
PTPRE-211ENST00000495530 KLHDC4Q8TBB5 520 aa18.06■□□□□ 0.48
PTPRE-211ENST00000495530 MASTLQ96GX5 879 aa18.06■□□□□ 0.48
PTPRE-211ENST00000495530 ZNF594Q96JF6 807 aaPredicted RBP18.06■□□□□ 0.48
PTPRE-211ENST00000495530 LRRCC1Q9C099 1032 aa18.06■□□□□ 0.48
PTPRE-211ENST00000495530 SIL1Q9H173 461 aa18.06■□□□□ 0.48
PTPRE-211ENST00000495530 SEC31BQ9NQW1 1179 aa18.06■□□□□ 0.48
PTPRE-211ENST00000495530 CNNM1Q9NRU3 951 aa18.06■□□□□ 0.48
PTPRE-211ENST00000495530 SRGNP10124 158 aa18.05■□□□□ 0.48
PTPRE-211ENST00000495530 VEGFBP49765 207 aa18.05■□□□□ 0.48
PTPRE-211ENST00000495530 NUCB1Q02818 461 aa18.05■□□□□ 0.48
PTPRE-211ENST00000495530 GRAPQ13588 217 aa18.05■□□□□ 0.48
PTPRE-211ENST00000495530 TMC4Q7Z404 712 aa18.05■□□□□ 0.48
PTPRE-211ENST00000495530 C2CD5Q86YS7 1000 aa18.05■□□□□ 0.48
PTPRE-211ENST00000495530 GRAPLQ8TC17 118 aaPredicted RBP18.05■□□□□ 0.48
PTPRE-211ENST00000495530 BSDC1Q9NW68 430 aaPredicted RBP18.05■□□□□ 0.48
PTPRE-211ENST00000495530 DLEC1Q9Y238 1755 aa18.04■□□□□ 0.48
PTPRE-211ENST00000495530 RHPN1Q8TCX5 695 aa18.04■□□□□ 0.48
PTPRE-211ENST00000495530 CEP126Q9P2H0 1117 aa18.04■□□□□ 0.48
PTPRE-211ENST00000495530 MROH5Q6ZUA9 1318 aa18.03■□□□□ 0.48
PTPRE-211ENST00000495530 APBB1O00213 710 aa18.03■□□□□ 0.48
PTPRE-211ENST00000495530 CHRNA5P30532 468 aa18.03■□□□□ 0.48
PTPRE-211ENST00000495530 STYK1Q6J9G0 422 aa18.03■□□□□ 0.48
PTPRE-211ENST00000495530 CHD1LQ86WJ1 897 aa18.03■□□□□ 0.48
PTPRE-211ENST00000495530 RIPOR2Q9Y4F9 1068 aa18.03■□□□□ 0.48
PTPRE-211ENST00000495530 LRRC24Q50LG9 513 aa18.02■□□□□ 0.48
PTPRE-211ENST00000495530 ATG9AQ7Z3C6 839 aa18.02■□□□□ 0.48
PTPRE-211ENST00000495530 CLASRPQ8N2M8 674 aaKnown RBP18.02■□□□□ 0.48
PTPRE-211ENST00000495530 CELF1Q92879 486 aaKnown RBP18.02■□□□□ 0.48
PTPRE-211ENST00000495530 CNKSR1Q969H4 720 aa18.02■□□□□ 0.48
PTPRE-211ENST00000495530 TMX4Q9H1E5 349 aaPredicted RBP18.02■□□□□ 0.48
PTPRE-211ENST00000495530 SASH1O94885 1247 aa18.01■□□□□ 0.47
PTPRE-211ENST00000495530 MAP2K1Q02750 393 aaPredicted RBP18.01■□□□□ 0.47
PTPRE-211ENST00000495530 ZNF622Q969S3 477 aaKnown RBP eCLIP18.01■□□□□ 0.47
PTPRE-211ENST00000495530 PUS3Q9BZE2 481 aaKnown RBP18.01■□□□□ 0.47
PTPRE-211ENST00000495530 AKAP2Q9Y2D5 859 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms