RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 FAM212AQ96EL1 285 aa10.98□□□□□ -0.65
RPSA-209ENST00000495394 DDX27Q96GQ7 796 aaKnown RBP10.98□□□□□ -0.65
RPSA-209ENST00000495394 N6AMT1Q9Y5N5 214 aa10.98□□□□□ -0.65
RPSA-209ENST00000495394 SETD1AO15047 1707 aaKnown RBP10.98□□□□□ -0.65
RPSA-209ENST00000495394 TMEM110-MUSTN1A8MSY1 372 aa10.97□□□□□ -0.65
RPSA-209ENST00000495394 RPL17P18621 184 aaKnown RBP10.97□□□□□ -0.65
RPSA-209ENST00000495394 ZNF131P52739 623 aa10.97□□□□□ -0.65
RPSA-209ENST00000495394 FAM160A1Q05DH4 1040 aa10.97□□□□□ -0.65
RPSA-209ENST00000495394 MAPRE1Q15691 268 aaKnown RBP10.97□□□□□ -0.65
RPSA-209ENST00000495394 INF2Q27J81 1249 aa10.97□□□□□ -0.65
RPSA-209ENST00000495394 CCDC178Q5BJE1 867 aa10.97□□□□□ -0.65
RPSA-209ENST00000495394 RELL1Q8IUW5 271 aa10.97□□□□□ -0.65
RPSA-209ENST00000495394 MYOCDQ8IZQ8 938 aa10.97□□□□□ -0.65
RPSA-209ENST00000495394 FRS2Q8WU20 508 aa10.97□□□□□ -0.65
RPSA-209ENST00000495394 CEP89Q96ST8 783 aa10.97□□□□□ -0.65
RPSA-209ENST00000495394 RALGAPBQ86X10 1494 aa10.97□□□□□ -0.65
RPSA-209ENST00000495394 NRXN1Q9ULB1 1477 aa10.97□□□□□ -0.65
RPSA-209ENST00000495394 FGAP02671 866 aa10.97□□□□□ -0.65
RPSA-209ENST00000495394 RBM6P78332 1123 aaKnown RBP10.97□□□□□ -0.65
RPSA-209ENST00000495394 POU5F1BQ06416 359 aa10.97□□□□□ -0.65
RPSA-209ENST00000495394 SYNE3Q6ZMZ3 975 aa10.97□□□□□ -0.65
RPSA-209ENST00000495394 NFXL1Q6ZNB6 911 aa10.97□□□□□ -0.65
RPSA-209ENST00000495394 GOLGA6L1Q8N7Z2 621 aa10.97□□□□□ -0.65
RPSA-209ENST00000495394 DHX36Q9H2U1 1008 aaKnown RBP10.97□□□□□ -0.65
RPSA-209ENST00000495394 TRMT1Q9NXH9 659 aaKnown RBP10.97□□□□□ -0.65
RPSA-209ENST00000495394 CDKL5O76039 1030 aa10.96□□□□□ -0.65
RPSA-209ENST00000495394 MYBL2P10244 700 aa10.96□□□□□ -0.65
RPSA-209ENST00000495394 ENPP1P22413 925 aa10.96□□□□□ -0.65
RPSA-209ENST00000495394 CBX1P83916 185 aa10.96□□□□□ -0.65
RPSA-209ENST00000495394 NUTM2DQ5VT03 806 aaPredicted RBP10.96□□□□□ -0.65
RPSA-209ENST00000495394 PIK3C2GO75747 1445 aa10.96□□□□□ -0.66
RPSA-209ENST00000495394 BBOX1O75936 387 aa10.96□□□□□ -0.66
RPSA-209ENST00000495394 USP5P45974 858 aa10.96□□□□□ -0.66
RPSA-209ENST00000495394 AP1ARQ63HQ0 302 aa10.96□□□□□ -0.66
RPSA-209ENST00000495394 MCTP2Q6DN12 878 aa10.96□□□□□ -0.66
RPSA-209ENST00000495394 RBM12BQ8IXT5 1001 aaKnown RBP10.96□□□□□ -0.66
RPSA-209ENST00000495394 CDHR1Q96JP9 859 aa10.96□□□□□ -0.66
RPSA-209ENST00000495394 IWS1Q96ST2 819 aa10.96□□□□□ -0.66
RPSA-209ENST00000495394 TRIM6Q9C030 488 aaPredicted RBP10.96□□□□□ -0.66
RPSA-209ENST00000495394 UNC45AQ9H3U1 944 aa10.96□□□□□ -0.66
RPSA-209ENST00000495394 CASS4Q9NQ75 786 aa10.96□□□□□ -0.66
RPSA-209ENST00000495394 TRPV5Q9NQA5 729 aa10.96□□□□□ -0.66
RPSA-209ENST00000495394 TBX22Q9Y458 520 aa10.96□□□□□ -0.66
RPSA-209ENST00000495394 ADAMTS13Q76LX8 1427 aa10.95□□□□□ -0.66
RPSA-209ENST00000495394 CHD2O14647 1828 aaKnown RBP10.95□□□□□ -0.66
RPSA-209ENST00000495394 KIF7Q2M1P5 1343 aa10.95□□□□□ -0.66
RPSA-209ENST00000495394 KIAA1210Q9ULL0 1709 aa10.95□□□□□ -0.66
RPSA-209ENST00000495394 PRC1O43663 620 aa10.95□□□□□ -0.66
RPSA-209ENST00000495394 MMEP08473 750 aa10.95□□□□□ -0.66
RPSA-209ENST00000495394 RBP3P10745 1247 aa10.95□□□□□ -0.66
RPSA-209ENST00000495394 HOXA10P31260 410 aaPredicted RBP10.95□□□□□ -0.66
RPSA-209ENST00000495394 SEPT2Q15019 361 aa10.95□□□□□ -0.66
RPSA-209ENST00000495394 TCEAL1Q15170 157 aa10.95□□□□□ -0.66
RPSA-209ENST00000495394 MYLK4Q86YV6 388 aaPredicted RBP10.95□□□□□ -0.66
RPSA-209ENST00000495394 SAMD14Q8IZD0 417 aaPredicted RBP10.95□□□□□ -0.66
RPSA-209ENST00000495394 TRIML1Q8N9V2 468 aa10.95□□□□□ -0.66
RPSA-209ENST00000495394 RUNDC1Q96C34 613 aa10.95□□□□□ -0.66
RPSA-209ENST00000495394 RASSF4Q9H2L5 321 aa10.95□□□□□ -0.66
RPSA-209ENST00000495394 CHMP3Q9Y3E7 222 aa10.95□□□□□ -0.66
RPSA-209ENST00000495394 USP47Q96K76 1375 aa10.95□□□□□ -0.66
RPSA-209ENST00000495394 ALKQ9UM73 1620 aa10.94□□□□□ -0.66
RPSA-209ENST00000495394 COL6A1P12109 1028 aa10.94□□□□□ -0.66
RPSA-209ENST00000495394 PDE4DQ08499 809 aa10.94□□□□□ -0.66
RPSA-209ENST00000495394 PRPF4BQ13523 1007 aaKnown RBP10.94□□□□□ -0.66
RPSA-209ENST00000495394 TRIM29Q14134 588 aa10.94□□□□□ -0.66
RPSA-209ENST00000495394 GBP4Q96PP9 640 aa10.94□□□□□ -0.66
RPSA-209ENST00000495394 PDGFDQ9GZP0 370 aaPredicted RBP10.94□□□□□ -0.66
RPSA-209ENST00000495394 ADGRF5Q8IZF2 1346 aa10.94□□□□□ -0.66
RPSA-209ENST00000495394 IL4RP24394 825 aa10.94□□□□□ -0.66
RPSA-209ENST00000495394 PDCD2Q16342 344 aaPredicted RBP10.94□□□□□ -0.66
RPSA-209ENST00000495394 MYSM1Q5VVJ2 828 aa10.94□□□□□ -0.66
RPSA-209ENST00000495394 TBC1D2Q9BYX2 928 aa10.94□□□□□ -0.66
RPSA-209ENST00000495394 TSPYL2Q9H2G4 693 aaPredicted RBP10.94□□□□□ -0.66
RPSA-209ENST00000495394 UQCRHLA0A096LP55 91 aa10.93□□□□□ -0.66
RPSA-209ENST00000495394 F8VZ95 297 aa10.93□□□□□ -0.66
RPSA-209ENST00000495394 VAMP4O75379 141 aa10.93□□□□□ -0.66
RPSA-209ENST00000495394 KRT38O76015 456 aa10.93□□□□□ -0.66
RPSA-209ENST00000495394 UQCRHP07919 91 aa10.93□□□□□ -0.66
RPSA-209ENST00000495394 SAFB2Q14151 953 aaKnown RBP eCLIP10.93□□□□□ -0.66
RPSA-209ENST00000495394 CCDC93Q567U6 631 aa10.93□□□□□ -0.66
RPSA-209ENST00000495394 RPUSD2Q8IZ73 545 aaKnown RBP10.93□□□□□ -0.66
RPSA-209ENST00000495394 GABPB2Q8TAK5 448 aaPredicted RBP10.93□□□□□ -0.66
RPSA-209ENST00000495394 STAG1Q8WVM7 1258 aa10.93□□□□□ -0.66
RPSA-209ENST00000495394 GJA3Q9Y6H8 435 aa10.93□□□□□ -0.66
RPSA-209ENST00000495394 NWD1Q149M9 1564 aa10.93□□□□□ -0.66
RPSA-209ENST00000495394 MSL3P1P0C860 447 aa10.93□□□□□ -0.66
RPSA-209ENST00000495394 SMARCA1P28370 1054 aa10.93□□□□□ -0.66
RPSA-209ENST00000495394 PIK3CAP42336 1068 aa10.93□□□□□ -0.66
RPSA-209ENST00000495394 DDB1Q16531 1140 aa10.93□□□□□ -0.66
RPSA-209ENST00000495394 ZCCHC8Q6NZY4 707 aaKnown RBP10.93□□□□□ -0.66
RPSA-209ENST00000495394 ATRIPQ8WXE1 791 aa10.93□□□□□ -0.66
RPSA-209ENST00000495394 YIPF2Q9BWQ6 316 aa10.93□□□□□ -0.66
RPSA-209ENST00000495394 PPP4R2Q9NY27 417 aa10.93□□□□□ -0.66
RPSA-209ENST00000495394 CPSF2Q9P2I0 782 aaKnown RBP10.93□□□□□ -0.66
RPSA-209ENST00000495394 PIK3R4Q99570 1358 aa10.92□□□□□ -0.66
RPSA-209ENST00000495394 STRCP1A6NGW2 1772 aa10.92□□□□□ -0.66
RPSA-209ENST00000495394 LDHAP00338 332 aaKnown RBP10.92□□□□□ -0.66
RPSA-209ENST00000495394 UBE4AQ14139 1066 aa10.92□□□□□ -0.66
RPSA-209ENST00000495394 PREPLQ4J6C6 727 aaPredicted RBP10.92□□□□□ -0.66
RPSA-209ENST00000495394 COBLL1Q53SF7 1204 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms